The TDT and other family-based tests for linkage disequilibrium and association.
paper
Cited
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- Authors
- Spielman, R S; Ewens, W J
- Year
- 1996
- Journal
- American journal of human genetics
- PMID
- 8900224
- PMCID
- PMC1914831
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| Multiple sclerosis in the tropics: genetic association to STR's loci spanning the HLA and TNF. | Palacio LG et al. | β | 2002 | β |
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| Polymorphisms in the TNF region confer susceptibility to UVB-induced impairment of contact hypersensitivity induction in mice and humans. | Niizeki H et al. | β | 2002 | β |
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| Serotonin transporter gene promoter variants do not explain the hyperserotoninemia in autistic children. | Persico AM et al. | β | 2002 | β |
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| The genetic basis for psychiatric illness in man. | Tandon K et al. | β | 2002 | β |
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| Further refinement of the MYP2 locus for autosomal dominant high myopia by linkage disequilibrium analysis. | Young TL et al. | β | 2001 | β |
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| Introduction: association and transmission/disequilibrium test analyses of discrete traits in the GAW12 simulated data. | Bailey-Wilson JE | β | 2001 | β |
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| Investigation of a candidate gene, environment, and G x E interaction using case-control and case-parent study designs. | Norris JM et al. | β | 2001 | β |
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| No association between the 4g/5G polymorphism of the plasminogen activator inhibitor-1 gene promoter and autistic disorder. | Persico AM et al. | β | 2001 | β |
| Possible relationship between the van der Woude syndrome (vWS) locus and nonsyndromic cleft lip with or without cleft palate (NSCL/P). | Houdayer C et al. | β | 2001 | β |
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| Sex, genes and blood pressure. | Ellis JA et al. | β | 2001 | β |
| Testing for colon neoplasia susceptibility variants at the human COX2 locus. | Wiesner GL et al. | β | 2001 | β |
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| Trimming, weighting, and grouping SNPs in human case-control association studies. | Hoh J et al. | β | 2001 | β |
| Two newly identified SNPs in the APO AI-CIII intergenic region are strongly associated with familial combined hyperlipidaemia. | Groenendijk M et al. | β | 2001 | β |
| Using complex plant pedigrees to map valuable genes. | Jannink J et al. | β | 2001 | β |
| Wingless-type frizzled protein receptor signaling and its putative role in human colon cancer. | Uthoff SM et al. | β | 2001 | β |
| Adenosine deaminase alleles and autistic disorder: case-control and family-based association studies. | Persico AM et al. | β | 2000 | β |
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| Analysis of linkage disequilibrium in gamma-aminobutyric acid receptor subunit genes in autistic disorder. | Martin ER et al. | β | 2000 | β |
| An analytic solution to single nucleotide polymorphism error-detection rates in nuclear families: implications for study design. | Gordon D et al. | β | 2000 | β |
| Angiotensin I-converting enzyme gene insertion/deletion and angiotensinogen M235T polymorphisms: risk of chronic renal failure. End-Stage Renal Disease Study Group. | Gumprecht J et al. | β | 2000 | β |
| A novel variant of the MHC-linked hsp70, hsp70-hom, is associated with rheumatoid arthritis. | Jenkins SC et al. | β | 2000 | β |
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| Assessment of the non-HLA-DR-DQ contribution to IDDM1 in British Caucasian families: analysis of LMP7 polymorphisms. | McTernan CL et al. | β | 2000 | β |
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| Association between the Glu298Asp polymorphism in the endothelial constitutive nitric oxide synthase gene and brain infarction. The GENIC Investigators. | Elbaz A et al. | β | 2000 | β |
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| beta(2)-adrenergic receptor Arg16/Arg16 genotype is associated with reduced lung function, but not with asthma, in the Hutterites. | Summerhill E et al. | β | 2000 | β |
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| CTLA-4 gene polymorphism confers susceptibility to primary biliary cirrhosis. | Agarwal K et al. | β | 2000 | β |
| Deciphering diabetic nephropathy: progress using genetic strategies. | Adler SG et al. | β | 2000 | β |
| Detection of disease genes by use of family data. II. Application to nuclear families. | Tu IP et al. | β | 2000 | β |
| Detection of disease genes by use of family data. I. Likelihood-based theory. | Whittemore AS et al. | β | 2000 | β |
| Evaluation of IBD candidate genes and the case of NRAMP2. | Brant SR | β | 2000 | β |
| Exploiting excess sharing: a more powerful test of linkage for affected sib pairs than the transmission/disequilibrium test. | Wicks J | β | 2000 | β |
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| Genetics of body-weight regulation. | Barsh GS et al. | β | 2000 | β |
| Genetic studies of autism: from the 1970s into the millennium. | Rutter M | β | 2000 | β |
| Genetic studies of substance abuse. | Vanyukov MM et al. | β | 2000 | β |
| Genomewide search in Canadian families with inflammatory bowel disease reveals two novel susceptibility loci. | Rioux JD et al. | β | 2000 | β |
| HLA-DRB1*01 alleles are associated with sensitization to cockroach allergens. | Donfack J et al. | β | 2000 | β |
| HLA-DRB1*04 and susceptibility to type 1 diabetes mellitus in a German/Belgian family and German case-control study. The Belgian Diabetes Registry. | Donner H et al. | β | 2000 | β |
| Identifying autism susceptibility genes. | Maestrini E et al. | β | 2000 | β |
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| Lack of association between serotonin transporter gene promoter variants and autistic disorder in two ethnically distinct samples. | Persico AM et al. | β | 2000 | β |
| Linkage disequilibrium analysis of biallelic DNA markers, human quantitative trait loci, and threshold-defined case and control subjects. | Schork NJ et al. | β | 2000 | β |
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| Localization of psoriasis-susceptibility locus PSORS1 to a 60-kb interval telomeric to HLA-C. | Nair RP et al. | β | 2000 | β |
| Molecular heterosis: a review. | Comings DE et al. | β | 2000 | β |
| Mutation screening of the chromosome 8q24.3-human activity-regulated cytoskeleton-associated gene (ARC) in idiopathic generalized epilepsy. | Haug K et al. | β | 2000 | β |
| Pharmacogenetics and the serotonin system: initial studies and future directions. | Veenstra-VanderWeele J et al. | β | 2000 | β |
| Pharmacogenetics. Promise and potential in child and adolescent psychiatry. | Anderson GM et al. | β | 2000 | β |
| Pharmacogenomics and addiction to opiates. | Lichtermann D et al. | β | 2000 | β |
| Polymorphisms of the IL-4, TNF-alpha, and Fcepsilon RIbeta genes and the risk of allergic disorders in at-risk infants. | Zhu S et al. | β | 2000 | β |
| Pooled genotyping of microsatellite markers in parent-offspring trios. | Kirov G et al. | β | 2000 | β |
| Relationship between case-control studies and the transmission/disequilibrium test. | Mitchell LE | β | 2000 | β |
| Removing the sampling restrictions from family-based tests of association for a quantitative-trait locus. | Monks SA et al. | β | 2000 | β |
| RET genotypes comprising specific haplotypes of polymorphic variants predispose to isolated Hirschsprung disease. | Borrego S et al. | β | 2000 | β |
| Searching for a locus for schizophrenia within chromosome Xp11. | Wei J et al. | β | 2000 | β |
| Serotonin transporter gene and schizophrenia: evidence for association/linkage disequilibrium in families with affected siblings. | Hranilovic D et al. | β | 2000 | β |
| S gene (Corneodesmosin) diversity and its relationship to psoriasis; high content of cSNP in the HLA-linked S gene. | EnerbΓ€ck C et al. | β | 2000 | β |
| Some properties of a variance components model for fine-mapping quantitative trait loci. | Cardon LR et al. | β | 2000 | β |
| Statistical approaches to gene mapping. | Ott J et al. | β | 2000 | β |
| The NOTCH4 locus is associated with susceptibility to schizophrenia. | Wei J et al. | β | 2000 | β |
| The use of case-parent triads to study joint effects of genotype and exposure. | Umbach DM et al. | β | 2000 | β |
| Transmission/disequilibrium tests using multiple tightly linked markers. | Zhao H et al. | β | 2000 | β |
| Ultradian rapid cycling in prepubertal and early adolescent bipolarity is not in transmission disequilibrium with val/met COMT alleles. | Geller B et al. | β | 2000 | β |
| Unbiased application of the transmission/disequilibrium test to multilocus haplotypes. | Dudbridge F et al. | β | 2000 | β |
| Use of classification trees for association studies. | Zhang H et al. | β | 2000 | β |
| Variation in the interleukin 4-receptor alpha gene confers susceptibility to asthma and atopy in ethnically diverse populations. | Ober C et al. | β | 2000 | β |
| A fifth locus for Bardet-Biedl syndrome maps to chromosome 2q31. | Young TL et al. | β | 1999 | β |
| Allowing for missing parents in genetic studies of case-parent triads. | Weinberg CR | β | 1999 | β |
| A logistic regression extension of the transmission disequilibrium test for continuous traits: application to linkage disequilibrium between alcoholism and the candidate genes DRD2 and ADH3. | Waldman ID et al. | β | 1999 | β |
| Applicability of the case-parent design in the etiological research of Type 1 diabetes in Chile and other genetically mixed populations. | Santos JL et al. | β | 1999 | β |
| A program for the monte carlo evaluation of significance of the extended transmission/disequilibrium test. | Zhao JH et al. | β | 1999 | β |
| A screen of candidates from peaks of linkage: evidence for the involvement of myeloperoxidase in multiple sclerosis. | Chataway J et al. | β | 1999 | β |
| A test of transmission/disequilibrium for quantitative traits in pedigree data, by multiple regression. | George V et al. | β | 1999 | β |
| Basic concepts in the study of diseases with complex genetics. | Burmeister M | β | 1999 | β |
| Benefits and pitfalls encountered in psychiatric genetic association studies. | Malhotra AK et al. | β | 1999 | β |
| Characterization of the major susceptibility region for psoriasis at chromosome 6p21.3. | Balendran N et al. | β | 1999 | β |
| Cladistic association analysis of Y chromosome effects on alcohol dependence and related personality traits. | Kittles RA et al. | β | 1999 | β |
| Comparison of linkage-disequilibrium methods for localization of genes influencing quantitative traits in humans. | Page GP et al. | β | 1999 | β |
| Do schizophrenia and affective disorder share susceptibility genes? | Wildenauer DB et al. | β | 1999 | β |
| Exploring genetic analysis of complex traits through the paradigm of alcohol dependence: summary of GAW11 contributions. | Almasy L et al. | β | 1999 | β |
| Exploring the dense mapping of a region of potential linkage in complex disease: an example in multiple sclerosis. | Feakes R et al. | β | 1999 | β |
| Finite-sample properties of family-based association tests. | Whittaker JC et al. | β | 1999 | β |
| Gene mapping by linkage and association analysis. | March RE | β | 1999 | β |
| Genetic linkage of IgA deficiency to the major histocompatibility complex: evidence for allele segregation distortion, parent-of-origin penetrance differences, and the role of anti-IgA antibodies in disease predisposition. | VorechovskΓ½ I et al. | β | 1999 | β |
| Genetic mapping of complex traits. | Olson JM et al. | β | 1999 | β |
| Genetic susceptibility and ischaemic stroke. | Elbaz A et al. | β | 1999 | β |
| Lack of evidence for association between the endothelial nitric oxide synthase gene and hypertension. | Kato N et al. | β | 1999 | β |
| Linkage detection adaptive to linkage disequilibrium: the disequilibrium maximum-likelihood-binomial test for affected-sibship data. | Huang J et al. | β | 1999 | β |
| Linkage mapping for hypertension susceptibility genes. | Kato N et al. | β | 1999 | β |
| Methionine synthase: high-resolution mapping of the human gene and evaluation as a candidate locus for neural tube defects. | Brody LC et al. | β | 1999 | β |
| Methods for detection of parent-of-origin effects in genetic studies of case-parents triads. | Weinberg CR | β | 1999 | β |
| Modeling linkage and association with evaluation of common sampling schemes. | Wicks J et al. | β | 1999 | β |
| Multipoint linkage disequilibrium mapping with particular reference to the African-American population. | Zheng C et al. | β | 1999 | β |
| No evidence for association of multiple sclerosis with the complement factors C6 and C7. | Chataway J et al. | β | 1999 | β |
| Nonparametric linkage and family-based association studies of a simulated complex disorder. | Koller DL et al. | β | 1999 | β |
| Physical mapping of the serotonin 5-HT(7) receptor gene (HTR7) to chromosome 10 and pseudogene (HTR7P) to chromosome 12, and testing of linkage disequilibrium between HTR7 and autistic disorder. | Lassig JP et al. | β | 1999 | β |
| Polycystic ovary syndrome. Phenotype to genotype. | Legro RS | β | 1999 | β |
| Power loss for multiallelic transmission/disequilibrium test when errors introduced: GAW11 simulated data. | Gordon D et al. | β | 1999 | β |
| Relative power of linkage and transmission disequilibrium test strategies to detect non-HLA linked coeliac disease susceptibility genes. | Bevan S et al. | β | 1999 | β |
| Search for susceptibility genes, gene x gene interactions, and gene x environment interactions utilizing nonparametric linkage analysis. | Ehm MG et al. | β | 1999 | β |
| Serotonin transporter (5-HTT) and gamma-aminobutyric acid receptor subunit beta3 (GABRB3) gene polymorphisms are not associated with autism in the IMGSA families. The International Molecular Genetic Study of Autism Consortium. | Maestrini E et al. | β | 1999 | β |
| Serotonin transporter gene (HTTLPR) is not in linkage disequilibrium with prepubertal and early adolescent bipolarity. | Geller B et al. | β | 1999 | β |
| Significant evidence for linkage of a simulated trait to D1G024--a conclusion reached using multiallelic transmission/disequilibrium tests. | Ziegler A et al. | β | 1999 | β |
| Summary of analyses of problem 2 simulated data for GAW11. | Greenberg DA | β | 1999 | β |
| Systematic search for susceptibility genes in different populations. | Schmidt S et al. | β | 1999 | β |
| TDT clarification. | Spielman RS et al. | β | 1999 | β |
| The early development of child psychopharmacogenetics. | Cook EH | β | 1999 | β |
| The Emerging Importance of Genetics in Epidemiologic Research III. Bioinformatics and statistical genetic methods. | Ellsworth DL et al. | β | 1999 | β |
| The interpretation of the parameters in the transmission/disequilibrium test. | Zhao H | β | 1999 | β |
| The role of genetic factors in autoimmune disease: implications for environmental research. | Cooper GS et al. | β | 1999 | β |
| The transmission/disequilibrium test and parental-genotype reconstruction: the reconstruction-combined transmission/ disequilibrium test. | Knapp M | β | 1999 | β |
| Tumour necrosis factor-alpha promoter polymorphisms in primary biliary cirrhosis. | Jones DE et al. | β | 1999 | β |
| Two tests of association for a susceptibility locus for families of variable size: an example using two sampling strategies. | Monks SA et al. | β | 1999 | β |
| A comparative study of sibship tests of linkage and/or association. | Monks SA et al. | β | 1998 | β |
| A family-based analysis of the association of the dopamine D2 receptor (DRD2) with alcoholism. | Edenberg HJ et al. | β | 1998 | β |
| A family-based analysis of whether the functional promoter alleles of the serotonin transporter gene HTT affect the risk for alcohol dependence. | Edenberg HJ et al. | β | 1998 | β |
| A genome-wide screen for susceptibility loci in ankylosing spondylitis. | Brown MA et al. | β | 1998 | β |
| Allele frequency distributions in pooled DNA samples: applications to mapping complex disease genes. | Shaw SH et al. | β | 1998 | β |
| A log-linear approach to case-parent-triad data: assessing effects of disease genes that act either directly or through maternal effects and that may be subject to parental imprinting. | Weinberg CR et al. | β | 1998 | β |
| A sibship test for linkage in the presence of association: the sib transmission/disequilibrium test. | Spielman RS et al. | β | 1998 | β |
| Association and linkage of the dopamine transporter gene and attention-deficit hyperactivity disorder in children: heterogeneity owing to diagnostic subtype and severity. | Waldman ID et al. | β | 1998 | β |
| Association of MSX1 and TGFB3 with nonsyndromic clefting in humans. | Lidral AC et al. | β | 1998 | β |
| Current developments in the molecular genetics of the polycystic ovary syndrome. | Franks S et al. | β | 1998 | β |
| DNA variation and the future of human genetics. | Schafer AJ et al. | β | 1998 | β |
| Genes in the spondyloarthropathies. | Wordsworth P | β | 1998 | β |
| Genetic association mapping based on discordant sib pairs: the discordant-alleles test. | Boehnke M et al. | β | 1998 | β |
| Genetics of alcoholism. | Edenberg HJ | β | 1998 | β |
| Genetics of polycystic ovary syndrome. | Franks S et al. | β | 1998 | β |
| Identification of novel susceptibility loci for inflammatory bowel disease on chromosomes 1p, 3q, and 4q: evidence for epistasis between 1p and IBD1. | Cho JH et al. | β | 1998 | β |
| Inheritance of susceptibility to multiple sclerosis. | Sawcer S et al. | β | 1998 | β |
| Issues and strategies in the genetic analysis of alcoholism and related addictive behaviors. | Schork NJ et al. | β | 1998 | β |
| Lack of association between the alpha-adducin locus and essential hypertension in the Japanese population. | Kato N et al. | β | 1998 | β |
| Linkage analysis, kinship, and the short-term evolution of chromosomes. | Schork NJ et al. | β | 1998 | β |
| Linkage analysis of human leukocyte antigen (HLA) markers in familial psoriasis: strong disequilibrium effects provide evidence for a major determinant in the HLA-B/-C region. | Jenisch S et al. | β | 1998 | β |
| Linkage and association. | Elston RC | β | 1998 | β |
| Marker selection for the transmission/disequilibrium test, in recently admixed populations. | Kaplan NL et al. | β | 1998 | β |
| Promoter sequence, expression, and fine chromosomal mapping of the human gene (MLP) encoding the MARCKS-like protein: identification of neighboring and linked polymorphic loci for MLP and MACS and use in the evaluation of human neural tube defects. | Stumpo DJ et al. | β | 1998 | β |
| Significance levels in complex inheritance. | Morton NE | β | 1998 | β |
| Support for a chromosome 18p locus conferring susceptibility to functional psychoses in families with schizophrenia, by association and linkage analysis. | Schwab SG et al. | β | 1998 | β |
| The effect of family structure on linkage tests using allelic association. | Whittaker JC et al. | β | 1998 | β |
| The inheritance of alcoholic liver disease. | Bassendine MF et al. | β | 1998 | β |
| The relation of the dopamine transporter gene (DAT1) to symptoms of internalizing disorders in children. | Rowe DC et al. | β | 1998 | β |
| Transmission disequilibrium, family controls, and great expectations. | Schaid DJ | β | 1998 | β |
| Using association studies to test for gene-environment interaction asthma and other complex diseases. | Beaty TH | β | 1998 | β |
| Using information from both parents when testing for association between marker and disease loci. | Whittaker JC et al. | β | 1998 | β |
| Why different rules are required for polygenic inheritance: lessons from studies of the DRD2 gene. | Comings DE | β | 1998 | β |
| Application of transmission disequilibrium tests to nonsyndromic oral clefts: including candidate genes and environmental exposures in the models. | Maestri NE et al. | β | 1997 | β |
| Exact transmission-disequilibrium tests with multiallelic markers. | Cleves MA et al. | β | 1997 | β |
| Genetics of asthma: a review. | Manian P | β | 1997 | β |
| Genetics of complex disease: approaches, problems, and solutions. | Schork NJ | β | 1997 | β |
| Genomewide transmission/disequilibrium testing--consideration of the genotypic relative risks at disease loci. | Camp NJ | β | 1997 | β |
| Genotype relative-risks and association tests for nuclear families with missing parental data. | Schaid DJ et al. | β | 1997 | β |
| Investigation of the candidate genes ACTHR and golf for bipolar illness by the transmission/disequilibrium test. | BickebΓΆller H et al. | β | 1997 | β |
| Linkage disequilibrium between the dopamine transporter gene (DAT1) and bipolar disorder: extending the transmission disequilibrium test (TDT) to examine genetic heterogeneity. | Waldman ID et al. | β | 1997 | β |
| Molecular genetics and the epidemiology of common mental disorders: new opportunities. | Henderson S et al. | β | 1997 | β |
| Power studies for the transmission/disequilibrium tests with multiple alleles. | Kaplan NL et al. | β | 1997 | β |
| Tests for linkage and association in nuclear families. | Martin ER et al. | β | 1997 | β |
| The maddening hunt for madness genes. | Moldin SO | β | 1997 | β |
| Transmission/disequilibrium tests for multiallelic loci. | Sham P | β | 1997 | β |