A statistical framework for SNP calling, mutation discovery, association mapping and population genetical parameter estimation from sequencing data.
paper
Cited
Public
Unavailable
- Authors
- Li, Heng
- Year
- 2011
- Journal
- Bioinformatics (Oxford, England)
- PMID
- 21903627
- DOI
- 10.1093/bioinformatics/btr509
- PMCID
- PMC3198575
MOTIVATION: Most existing methods for DNA sequence analysis rely on accurate sequences or genotypes. However, in applications of the next-generation sequencing (NGS), accurate genotypes may not be easily obtained (e.g. multi-sample low-coverage sequencing or somatic mutation discovery). These applications press for the development of new methods for analyzing sequence data with uncertainty. RESULTS: We present a statistical framework for calling SNPs, discovering somatic mutations, inferring population genetical parameters and performing association tests directly based on sequencing data without explicit genotyping or linkage-based imputation. On real data, we demonstrate that our method achieves comparable accuracy to alternative methods for estimating site allele count, for inferring allele frequency spectrum and for association mapping. We also highlight the necessity of using symmetric datasets for finding somatic mutations and confirm that for discovering rare events, mismapping is frequently the leading source of errors. AVAILABILITY: http://samtools.sourceforge.net. CONTACT: hengli@broadinstitute.org.
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| Combining chromosome conformation capture and exome sequencing for simultaneous detection of structural and single-nucleotide variants. | Gridina M et al. | β | 2025 | β |
| Comparative analysis of genotype imputation strategies for SNPs calling from RNA-seq. | Guo K et al. | β | 2025 | β |
| Comparative evaluation of four exome enrichment solutions in 2024: Agilent, Roche, Vazyme and Nanodigmbio. | Belova V et al. | β | 2025 | β |
| Comparative genomic analyses reveal different genetic basis of two types of fruit in Maloideae. | Wang Y et al. | β | 2025 | β |
| Comparative transcriptome profiling reveals molecular mechanisms of freezing stress responses in cultivated and wild Cicer species. | BakΔ±r M et al. | β | 2025 | β |
| Comparison of short-read and long-read metagenome assemblies in a natural soil community highlights systematic bias in recovery of high-diversity populations. | Berg M et al. | β | 2025 | β |
| Complete genome sequence of <i>Geobacillus icigianus</i> ID-2 from an Indonesian hot spring. | Sung J-Y et al. | β | 2025 | β |
| Comprehensive computational analysis of deleterious nsSNPs in <i>PTEN</i> gene for structural and functional insights. | Sharma D et al. | β | 2025 | β |
| Comprehensive Transcriptomic Analysis and Experimental Validation of Notochordal Cells and Nucleus Pulposus Cells: Uncovering Novel Therapeutic Targets for Intervertebral Disc Degeneration. | Li Y et al. | β | 2025 | β |
| Constraints to gene flow increase the risk of genome erosion in the Ngorongoro Crater lion population. | Dussex N et al. | β | 2025 | β |
| Continuous targeted hypermutation with a tunable mutation window. | Lee C et al. | β | 2025 | β |
| Contrasting Genomic Diversity and Inbreeding Levels Among Two Closely Related Falcon Species With Overlapping Geographic Distributions. | Martin AM et al. | β | 2025 | β |
| Contribution of Rare and Potentially Functionally RelevantΒ Sequence Variants in Schizophrenia Risk-Locus Xq28,distal. | Claus I et al. | β | 2025 | β |
| Cross-species and mammal-to-mammal transmission of clade 2.3.4.4b highly pathogenic avian influenza A/H5N1 with PB2 adaptations. | Pardo-Roa C et al. | β | 2025 | β |
| Cryo-EM structure of endogenous Pfs230:Pfs48/45 complex with six antibodies reveals mechanisms of malaria transmission-blocking activity. | Bekkering ET et al. | β | 2025 | β |
| Deficiency of the palmitoyl acyltransferase ZDHHC7 modulates depression-like behaviour in female mice after a mild chronic stress paradigm. | Hohoff C et al. | β | 2025 | β |
| Defining the genetics of the widely used G3 strain of the mosquito, Anopheles gambiae. | Campos M et al. | β | 2025 | β |
| Deleterious variants in LTBP4 are associated with severe pediatric sepsis. | Qin Y et al. | β | 2025 | β |
| Delineating molecular mechanisms on the acquisition of <i>in vitro-</i>adapted colistin-resistant <i>Klebsiella pneumoniae</i> by transcriptomic analysis. | Kyung SM et al. | β | 2025 | β |
| Detecting known neoepitopes, gene fusions, transposable elements, and circular RNAs in cell-free RNA. | Mahajan M et al. | β | 2025 | β |
| Detection and genetic characterization of alphacoronaviruses in co-roosting bat species, southeastern Kenya. | Ogola JG et al. | β | 2025 | β |
| Detection of <i>Clostridium sporogenes</i> in a Roman-era cattle mass grave at Vilauba. | Myburgh DA et al. | β | 2025 | β |
| Development of a Clinically Applicable High-Resolution Assay for Sperm Mosaicism. | Wei S et al. | β | 2025 | β |
| Development of SNP for <i>Sebastes</i> Species Identification With Special Focus on the Cryptic Species Complex of <i>Sebastes norvegicus</i>. | Johansen T et al. | β | 2025 | β |
| Differential gene expression in dromedary camels infested with sarcoptic mange. | Mehta SC et al. | β | 2025 | β |
| Differential gene reactions reveal drought response strategies in African acacias. | Weinheimer EI et al. | β | 2025 | β |
| Differential regulation of mesoscale chromosome conformations in osteoblasts and osteosarcoma. | Bisht M et al. | β | 2025 | β |
| Differentiation of European yellow rust subraces within the 'Warrior(-)' genetic group. | Breitkreuz C et al. | β | 2025 | β |
| Direct and indirect effects of multiplex genome editing of F5H and FAD2 in oil crop camelina. | van Belle J et al. | β | 2025 | β |
| Discovery of variation in genes related to agronomic traits by sequencing the genome of Cucurbita pepo varieties. | PΓ©rez-Moro C et al. | β | 2025 | β |
| Disorders in brassinosteroids signal transduction triggers the profound molecular alterations in the crown tissue of barley under drought. | KuczyΕska A et al. | β | 2025 | β |
| Divergence, hybridization, and diversification in an eastern North American willow syngameon. | Guo M et al. | β | 2025 | β |
| Domestication history and genetic changes for the newly evolved flower color in the ornamental plant <i>Lobularia maritima</i> (Brassicaceae). | Yang W et al. | β | 2025 | β |
| Dominant Negative Mitf Allele Impacts Melanophore and Xanthophore Development and Reveals Collaborative Interactions With Tfec in Zebrafish Chromatophore Lineages. | Korzeniwsky KG et al. | β | 2025 | β |
| Double trouble: two retrotransposons triggered a cascade of invasions in Drosophila species within the last 50 years. | Scarpa A et al. | β | 2025 | β |
| Dynamic Outlier Slicing Allows Broader Exploration of Adaptive Divergence: A Comparison of Individual Genome and Pool-Seq Data Linked to Humic Adaptation in Perch. | LΓ³pez ME et al. | β | 2025 | β |
| Ecological speciation with gene flow followed initial large-scale geographic speciation in the enigmatic afroalpine giant senecios (Dendrosenecio). | Gorospe JM et al. | β | 2025 | β |
| Emergence and global spread of a dominant multidrug-resistant clade within Acinetobacter baumannii. | Li S et al. | β | 2025 | β |
| Enabling efficient analysis of biobank-scale data with genotype representation graphs. | DeHaas D et al. | β | 2025 | β |
| Ensemblex: an accuracy-weighted ensemble genetic demultiplexing framework for population-scale scRNAseq sample pooling. | Fiorini MR et al. | β | 2025 | β |
| Environmental Variation Influences Genome Evolution in Hispaniolan Trunk Anoles (Anolis distichus). | Myers TC et al. | β | 2025 | β |
| Estimating realized relatedness in free-ranging macaques by inferring identity-by-descent segments. | Freudiger A et al. | β | 2025 | β |
| Evidence for a transgenerational mutational signature from ionizing radiation exposure in humans. | Brand F et al. | β | 2025 | β |
| Evolutionary Genomics Unravels the Responses and Adaptation to Climate Change in a Key Alpine Forest Tree Species. | Long Z et al. | β | 2025 | β |
| Evolution of Large Polymorphic Inversions in a Panmictic Songbird. | Pei Y et al. | β | 2025 | β |
| Evolution of mitochondrial RNA editing sites and stop codon-lacking transcripts in angiosperms. | Yu R et al. | β | 2025 | β |
| Exceedingly low genetic diversity in snow leopards due to persistently small population size. | Solari KA et al. | β | 2025 | β |
| Exome sequencing in Asian populations identifies low-frequency and rare coding variation influencing Parkinson's disease risk. | Chew EG et al. | β | 2025 | β |
| Exome-wide association study of bleeding events in patients receiving direct oral anticoagulants. | Sychev DA et al. | β | 2025 | β |
| Expanded T cell clones with lymphoma driver somatic mutations accumulate in refractory celiac disease. | Singh M et al. | β | 2025 | β |
| Experience in developing the human genome standard E701. | Vasiliadis I et al. | β | 2025 | β |
| Exploration of chaos game representation and integrative deep learning approaches for whole-genome sequencing-based grapevine genetic testing. | Vu A et al. | β | 2025 | β |
| Exploring genetic diversity and population structure of Myanmar indigenous chickens using double digest restriction site-associated DNA sequencing. | Mon SLY et al. | β | 2025 | β |
| Exploring mitonuclear interactions in the regulation of cell physiology: Insights from interspecies cybrids. | Gaertner K et al. | β | 2025 | β |
| Exploring Morphological, Transcriptomic, and Metabolomic Differences Between Two Sister Lines with Contrasting Resistance to Orange Rust Disease in Sugarcane. | Zhou Y et al. | β | 2025 | β |
| Exploring pharmacogenetic factors influencing hydroxyurea response in tanzanian sickle cell disease patients: a genomic medicine approach. | Nkya S et al. | β | 2025 | β |
| Exploring transmission dynamics in epidemiologically linked pulmonary tuberculosis cases and household contacts: a WGS-based investigation. | Seid G et al. | β | 2025 | β |
| Expression quantitative trait loci associated with performance traits, blood biochemical parameters, and cytokine profile in pigs. | Freitas FAO et al. | β | 2025 | β |
| Extensive Admixture Among Karst-Obligate Salamanders Reveals Evidence of Recent Divergence and Gene Exchange Through Aquifers. | Nice CC et al. | β | 2025 | β |
| Extensively acquired antimicrobial-resistant bacteria restructure the individual microbial community in post-antibiotic conditions. | Baek JW et al. | β | 2025 | β |
| Extreme QTL mapping enables the identification of novel zinc toxicity response loci in Drosophila melanogaster. | Hanson KM et al. | β | 2025 | β |
| FamLink2 - A comprehensive tool for likelihood computations in pedigrees analyses involving linked DNA markers accounting for genotype uncertainties. | Kling D et al. | β | 2025 | β |
| First Identification of MORF Family in Ferns: Molecular Regulation of Organellar RNA Editing in <i>Osmunda japonica</i> and <i>Plenasium vachellii</i>. | Li L et al. | β | 2025 | β |
| First interspecific multi-parent advanced generation inter-cross (MAGIC) population in <i>Capsicum</i> peppers: development, phenotypic evaluation, genomic analysis, and prospects. | Ortega-Albero N et al. | β | 2025 | β |
| f<sub>4</sub>-statistics-based ancestry profiling and convolutional neural network phenotyping shed new light on the structure of genetic and spike shape diversity in Aegilops tauschii Coss. | Koyama Y et al. | β | 2025 | β |
| FM3VCF: A software library for accelerating the loading of large VCF files in genotype data analyses. | Zuo Z et al. | β | 2025 | β |
| From phylogenomics to breeding: Can universal target capture probes be used in the development of SNP markers for kinship analysis? | Ousmael KM et al. | β | 2025 | β |
| Gene expression modules during the emergence stage of upland cotton under low-temperature stress and identification of the GhSPX9 cold-tolerance gene. | Lin Z et al. | β | 2025 | β |
| Gene Family Expansions Provide Molecular Flexibility Required for Context-Dependent Species Interactions. | Hernandez DJ et al. | β | 2025 | β |
| Genes linked to schistosome resistance identified in a genome-wide association study of African snail vectors. | Pennance T et al. | β | 2025 | β |
| Genetic analysis of the single internode dwarf 1 mutant in barley. | Overlander-Chen M et al. | β | 2025 | β |
| Genetic and morphological shifts associated with climate change in a migratory bird. | Adams N et al. | β | 2025 | β |
| Genetic Basis of Reproductive Isolation in Torrey Pine (<i>Pinus torreyana</i> Parry): Insights From Hybridization and Adaptation. | Di Santo LN et al. | β | 2025 | β |
| Genetic design of soybean hosts and bradyrhizobial endosymbionts reduces N<sub>2</sub>O emissions from soybean rhizosphere. | Nishida H et al. | β | 2025 | β |
| Genetic dissection of MutL complexes in Arabidopsis meiosis. | Kbiri N et al. | β | 2025 | β |
| Genetic estimates and genome-wide association studies of antibody response in Tanzanian dairy cattle. | Hernandez-Castro LE et al. | β | 2025 | β |
| Genetic mapping for agronomic, nutritional, and leaf vein traits in the indigenous crop <i>Gynandropsis gynandra</i>. | Simpson CJC et al. | β | 2025 | β |
| Genetic pre-adaptations in Saccharomyces cerevisiae Andean chicha isolates facilitate industrial brewery application. | Flores J et al. | β | 2025 | β |
| Genetic purging in an island-endemic pigeon recovering from the brink of extinction. | Tsujimoto D et al. | β | 2025 | β |
| Genetic structure and common ancestry expose the dingo-dog hybrid myth. | Weeks AR et al. | β | 2025 | β |
| Genetic structure and demographic history of house mice in western Europe inferred using whole-genome sequences. | Agwamba K et al. | β | 2025 | β |
| Genetic variants in diminished ovarian reserve and premature ovarian insufficiency: implications for assisted reproductive outcomes. | Xu Q et al. | β | 2025 | β |
| Genetic variants in the IFNGR2 locus associated with severe chronic Q fever. | David S et al. | β | 2025 | β |
| Genetic variation among progeny shapes symbiosis in a basidiomycete with poplar. | Dauphin B et al. | β | 2025 | β |
| Genome Analyses Reveal Diverse Riverine Genetic Contributions to the Lake Malawi Cichlid Radiation. | Gresham S et al. | β | 2025 | β |
| Genome architecture evolution in an invasive copepod species complex. | Du Z et al. | β | 2025 | β |
| Genome Assembly and Winged Fruit Gene Regulation of Chinese Wingnut: Insights from Genomic and Transcriptomic Analyses. | Geng F et al. | β | 2025 | β |
| Genome report: Genome of the Amazon guppy (Poecilia bifurca) reveals conservation of sex chromosomes and dosage compensation. | Fong LJM et al. | β | 2025 | β |
| Genome scan reveals several loci associated with torus palatinus. | Lee MK et al. | β | 2025 | β |
| Genomes of critically endangered saola are shaped by population structure and purging. | Garcia-Erill G et al. | β | 2025 | β |
| Genomes of Two Monophagous Weevils and Their Host Plant Provide Insights Into Evolution of Plant Defence and Insect Counter-Defence. | Song W et al. | β | 2025 | β |
| Genome-to-genome analysis reveals associations between human and mycobacterial genetic variation in tuberculosis patients from Tanzania. | Xu ZM et al. | β | 2025 | β |
| Genome-wide analysis of Udai21: Unraveling the genetic basis of superior eating quality in rice. | Ikeda H et al. | β | 2025 | β |
| Genome-wide association scan and candidate gene analysis for seed coat color in sesame (<i>Sesamum indicum</i> L.). | Elsafy M et al. | β | 2025 | β |
| Genome-wide association studies reveal genetic control of nutritional quality, milling traits, and agronomic characteristics in oat (Avena sativa L.). | Ardayfio NK et al. | β | 2025 | β |
| Genome-wide association study and genomic prediction of leaf spot (<i>Stemphylium vesicarium</i>) resistance in spinach diversity panel. | Bhattarai G et al. | β | 2025 | β |
| Genome-wide association study of copy number variation and early growth traits in inner Mongolian cashmere goats. | Liu Y et al. | β | 2025 | β |
| Genome wide association study of rice agronomical traits and seed ionome with the NARO Open Rice Collection. | Tanaka N et al. | β | 2025 | β |
| Genome-wide identifications of regulatory variants influencing milk fat percentage in Chinese Holstein cow. | Gong C et al. | β | 2025 | β |
| Genome-wide SNP Data and Integrated Morphology Reveal a New Trout Species from Δ°vriz and Berdan Streams, TΓΌrkiye. | Kaba MO et al. | β | 2025 | β |
| Genomic analysis highlights the conservation significance of Torenia concolor (Linderniaceae) from the periphery of its distribution range. | Isagi Y et al. | β | 2025 | β |
| Genomic analysis of 11,555 probands identifies 60 dominant congenital heart disease genes. | Sierant MC et al. | β | 2025 | β |
| Genomic Analysis of Hair Sheep From West/Central Africa Reveals Unique Genetic Diversity and Ancestral Links to Breed Formation in the Caribbean. | Wiener P et al. | β | 2025 | β |
| Genomic Analysis Suggests That Mitonuclear Coevolution Proceeds Over Rapid Timescales in the Amazonian Pipra Manakin Complex. | Nikelski E et al. | β | 2025 | β |
| Genomic and Phenotypic Characterization of CHO 4BGD Cells with Quad Knockout and Overexpression of Two Housekeeping Genes That Allow for Metabolic Selection and Extended Fed-Batch Culturing. | Orlova NA et al. | β | 2025 | β |
| Genomic Constellation of Foodborne Proteus Mirabilis Isolates Harboring AMR, Virulence Genes and Comparative WGS Analysis. | Singh S et al. | β | 2025 | β |
| Genomic data from the extinct California brown bear suggests a source population for reintroduction to California. | Wooldridge TB et al. | β | 2025 | β |
| Genomic Dissection of Chinese Yangtze River Delta White Goat Based on Whole Genome Sequencing. | Gao J et al. | β | 2025 | β |
| Genomic epidemiology of <i>Histoplasma</i> in Africa. | Mapengo RE et al. | β | 2025 | β |
| Genomic exploration of the journey of Plasmodium vivax in Latin America. | Lefebvre MJM et al. | β | 2025 | β |
| Genomic Footprints of Hybridisation in North Atlantic Eels (Anguilla anguilla and A. rostrata). | Tengstedt ANB et al. | β | 2025 | β |
| Genomic insights into adaptive evolution of Island brown rats (Rattus norvegicus): evidence from Iturup Island in the Russian Far East. | Liu N et al. | β | 2025 | β |
| Genomic Insights into <i>Neofusicoccum laricinum</i>: The Pathogen Behind Chinese Larch Shoot Blight. | Pan J et al. | β | 2025 | β |
| Genomic insights into racing camels: inbreeding levels and positive selection linked to athletic traits. | Bahbahani H et al. | β | 2025 | β |
| Genomic insights into the demographic history and local adaptation of wild boars across Eurasia. | Wang Z et al. | β | 2025 | β |
| Genomic origin and consequence of captive red junglefowl in zoological parks. | Matsuda Y et al. | β | 2025 | β |
| Genomic patterns of strain-specific genetic structure, linkage, and selection across fall armyworm populations. | Tessnow AE et al. | β | 2025 | β |
| Genomic prediction accounting for dominance and epistatic genetic effects on litter size traits in Large White pigs. | Chen J et al. | β | 2025 | β |
| Genomic reconstruction reveals impact of population management strategies on modern GalΓ‘pagos dogs. | Spatola GJ et al. | β | 2025 | β |
| Genomics and Transcriptomics of 3ANX (NX-2) and NX (NX-3) Producing Isolates of <i>Fusarium graminearum</i>. | Walker PL et al. | β | 2025 | β |
| Genomic Signatures of Selection Across Climate Gradients and a Geographic Mosaic of Coevolution in an Ant Social Parasite-Host System. | Macit MN et al. | β | 2025 | β |
| Genomic strategies to facilitate breeding for increased Ξ²-Glucan content in oat (Avena sativa L.). | Bazzer SK et al. | β | 2025 | β |
| Genomic Surveillance of Climate-Amplified Cholera Outbreak, Malawi, 2022-2023. | Chabuka L et al. | β | 2025 | β |
| German longevity study reveals novel rare pro-longevity alleles clustering in mTOR signaling pathway. | Kolbe D et al. | β | 2025 | β |
| Global diversity analysis of plant-associated <i>Pseudopithomyces</i> fungi reveals a new species producing the toxin associated with facial eczema in livestock: <i>Pseudopithomyces toxicarius sp. nov</i>. | Weir BS et al. | β | 2025 | β |
| Graph-based pangenome provides insights into structural variations and genetic basis of metabolic traits in potato. | Zhu X et al. | β | 2025 | β |
| GTPBP2 in-frame deletion in canine model with non-syndromic progressive retinal atrophy. | Murgiano L et al. | β | 2025 | β |
| GWAS-assisted and multitrait genomic prediction for improvement of seed yield and canning quality traits in a black bean breeding panel. | Izquierdo P et al. | β | 2025 | β |
| Hairpin loop to hairpin loop: a full-length assembly of the ASFV genome using Oxford Nanopore long-read sequencing. | Phadphon P et al. | β | 2025 | β |
| Haploinsufficiency of miR-143 and miR-145 reveal targetable dependencies in resistant del(5q) myelodysplastic neoplasm. | Gharaee N et al. | β | 2025 | β |
| Heat-Induced Secondary Dormancy Contributes to Local Adaptation in Arabidopsis thaliana. | Tran NLT et al. | β | 2025 | β |
| Heating up three cold cases in Norway using investigative genetic genealogy. | Aanes H et al. | β | 2025 | β |
| Heterogeneous <i>Salmonella</i> typhi transmission within a household: genomic insights from a chronic carrier. | Hussain R et al. | β | 2025 | β |
| Heterozygous deletion of 10q24.31-q24.33- a new syndrome associated with multiple congenital anomalies: case report and literature review. | Buianova AA et al. | β | 2025 | β |
| High Genetic Diversity of Histoplasma in the Amazon Basin, 2006-2017. | Ly T et al. | β | 2025 | β |
| High Imputation Accuracy Can Be Achieved Using a Small Reference Panel in a Natural Population With Low Genetic Diversity. | Tan HZ et al. | β | 2025 | β |
| High-quality genome assembly of Chironomus riparius and its population history in European populations. | Pettrich LC et al. | β | 2025 | β |
| High-quality phenotypic and genotypic dataset of barley genebank core collection to unlock untapped genetic diversity. | Yuan Z et al. | β | 2025 | β |
| High rate of multi-drug resistant Escherichia coli isolated from patients with urinary tract infections in Ifakara-Tanzania: implications for empirical antibiotic treatment guidelines and stewardship programs. | Macha ME et al. | β | 2025 | β |
| High-throughput targeted amplicon screening tool for characterizing intrahost diversity in <i>Staphylococcus aureus</i> directly from sample. | Furstenau TN et al. | β | 2025 | β |
| Historical introgression as a driver of diversification of diploid Picris (Compositae) in the Mediterranean Basin. | Gorospe JM et al. | β | 2025 | β |
| Horizontal Transfer and Recombination Fuel Ty4 Retrotransposon Evolution in Saccharomyces. | Chen J et al. | β | 2025 | β |
| How social and economic policies have affected the genome of mezcal agaves: The contrasting stories of Bacanora and EspadΓn. | Klimova A et al. | β | 2025 | β |
| Human de novo mutation rates from a four-generation pedigree reference. | Porubsky D et al. | β | 2025 | β |
| Hybrid genome assembly of the widespread bat Rhinolophus lepidus provides insights into susceptibility to SARS-CoV-2 infection and climate change threat. | Garg KM et al. | β | 2025 | β |
| Hybridization ddRAD-sequencing and phenotypic analysis clarify the phylogeographic structure and evolution of an alpine <i>Chrysanthemum</i> species with a sky island distribution. | Hu XY et al. | β | 2025 | β |
| Identification of quantitative trait loci (QTLs) for key cheese making phenotypes in the blue-cheese mold Penicillium roqueforti. | Caron T et al. | β | 2025 | β |
| Identification of Single Nucleotide Polymorphism from Insect Genomic Data. | Lozada-ChΓ‘vez AN et al. | β | 2025 | β |
| Identification of Viral Variants from Functional Genomics Data. | RΓΆckl F et al. | β | 2025 | β |
| IGD: a simple, efficient genotype data format. | DeHaas D et al. | β | 2025 | β |
| Immune profiling of premalignant lesions in patients with Peutz-Jeghers syndrome. | Liu Z et al. | β | 2025 | β |
| Impacts of Body Colour, Symbionts and Genomic Regions on the Pea Aphid Wing Plasticity Variation. | Gregory LE et al. | β | 2025 | β |
| Inbreeding reduces fitness in spatially structured populations of a threatened rattlesnake. | Clark MI et al. | β | 2025 | β |
| Incipient Range Expansion of Green Turtles in the Mediterranean. | MarΓn-Capuz G et al. | β | 2025 | β |
| Incomplete human reference genomes can drive false sex biases and expose patient-identifying information in metagenomic data. | Guccione C et al. | β | 2025 | β |
| Infectome analysis of bat kidneys from Yunnan province, China, reveals novel henipaviruses related to Hendra and Nipah viruses and prevalent bacterial and eukaryotic microbes. | Kuang G et al. | β | 2025 | β |
| Insights into the genetic basis of bilateral head asymmetry in a scale-eating cichlid fish. | Tian X et al. | β | 2025 | β |
| In situ diversification and adaptive introgression in Taiwanese Scutellaria. | Sun PW et al. | β | 2025 | β |
| Integrated functional genomic analysis identifies regulatory variants underlying a major QTL for disease resistance in European sea bass. | Mukiibi R et al. | β | 2025 | β |
| Integrating Population Genomics and Historical Occurrence Data to Assess the Impact of Land-Use Changes on Centris Oil Bees in the Brazilian Cerrado. | Sousa P et al. | β | 2025 | β |
| Integrating whole-genome resequencing and machine learning to refine QTL analysis for fruit quality traits in peach. | Fan J et al. | β | 2025 | β |
| Integration of genome and transcriptome reveals core genes and allele-specific expression genetic variants associated with immune differentiation of taurine ancestry dairy cattle from indicine ancestry cattle. | Chen Q et al. | β | 2025 | β |
| Integrative Genomics Refines Tissues, Candidate Genes and Putative Regulatory Links Involved in the Humic Adaptation of Keystone Freshwater Fish. | Ozerov MY et al. | β | 2025 | β |
| Integrative mapping in large inbred and hybrid association panels along with an F<sub>2</sub> population advanced a novel understanding of general combining ability for plant height in maize. | Luo J et al. | β | 2025 | β |
| Intergeneric Introgression Enhances the Adaptive Potential of Nine-Spined Stickleback (Pungitius pungitius). | Nedoluzhko AV et al. | β | 2025 | β |
| Internal migrants as drivers of long-distance cross-regional transmission of tuberculosis in China. | Li M et al. | β | 2025 | β |
| Introducing the Y-chromosomal Ancestral-like Reference Sequence-Improving the Capture of Human Evolutionary Information. | KΓΆksal Z et al. | β | 2025 | β |
| Introducing the Y chromosome ancestral reference sequence - Improving the capture of human evolutionary information | KΓΆksal Z et al. | β | 2025 | β |
| Investigation of bedaquiline heteroresistance among <i>Mycobacterium tuberculosis</i> isolates from Pakistan. | Rashid F et al. | β | 2025 | β |
| <i>PNPLA3</i>-Ile148Met and <i>TM6SF2</i>-Glu167Lys increase susceptibility to metabolic dysfunction-associated steatotic liver disease in children. | Yao H et al. | β | 2025 | β |
| Isotope geolocation and population genomics in <i>Vanessa cardui:</i> Short- and long-distance migrants are genetically undifferentiated. | Reich MS et al. | β | 2025 | β |
| Kidney multiome-based genetic scorecard reveals convergent coding and regulatory variants. | Liu H et al. | β | 2025 | β |
| Large Inversions Shape Diversification and Genome Evolution in Common Quails. | Ravagni S et al. | β | 2025 | β |
| Large-scale analysis of SARS-CoV-2 genomic data from sewage using eVarEPS reveals that amino acid mutations detected in sewage provide an early warning on population prevalence. | Lv Z et al. | β | 2025 | β |
| Large-scale identification and association analysis of wheat grain weight genes using rice orthologs. | Zhao W et al. | β | 2025 | β |
| Lasso peptides sviceucin and siamycin I exhibit anti-virulence activity and restore vancomycin effectiveness in vancomycin-resistant pathogens. | Boudrioua A et al. | β | 2025 | β |
| Learning a refinement model for variant analysis in non-human primate genomes. | Choi J et al. | β | 2025 | β |
| Leveraging genetic resources and genomic prediction to enhance flavonol content in cranberry fruit. | JimΓ©nez NP et al. | β | 2025 | β |
| Leveraging known Pacific colonisation times to test models for the ancestry of Southeast Asians. | Almeida M et al. | β | 2025 | β |
| Leveraging large language models to predict antibiotic resistance in Mycobacterium tuberculosis. | Testagrose C et al. | β | 2025 | β |
| Leveraging Synteny to Generate Reference Genomes for Conservation: Assembling the Genomes of Hector's and MΔui Dolphins. | Alvarez-Costes S et al. | β | 2025 | β |
| Life inside a bag: multiomics insights into the bagworm species Eumeta crameri. | Chakraborty A et al. | β | 2025 | β |
| Little millet genome reveals evolutionary insights into tetraploid structure and genetic basis of micronutrient density. | Gali KK et al. | β | 2025 | β |
| Local adaptation, genetic diversity and key environmental interactions in a collection of novel red clover germplasm. | Heslop AD et al. | β | 2025 | β |
| Local genetic adaptation to habitat in wild chimpanzees. | Ostridge HJ et al. | β | 2025 | β |
| Local Selection Shaped the Diversity of European Maize Landraces. | Takou M et al. | β | 2025 | β |
| LocusMasterTE: integrating long-read RNA sequencing improves locus-specific quantification of transposable element expression. | Lee S et al. | β | 2025 | β |
| Long-read sequencing reveals novel structural variation markers for key agronomic and quality traits of food-grade soybean. | Wang Z et al. | β | 2025 | β |
| Long shared haplotypes identify the southern Urals as a primary source for the 10th-century Hungarians. | Gyuris B et al. | β | 2025 | β |
| Low genetic diversity and weak population structure of Albizia odoratissima on Hainan Island. | Li Z et al. | β | 2025 | β |
| <i>Candida albicans</i> isolates contain frequent heterozygous structural variants and transposable elements within genes and centromeres. | Oggenfuss U et al. | β | 2025 | β |
| Machine learning detection of heteroresistance in EscherichiaΒ coli. | Guliaev A et al. | β | 2025 | β |
| Maternal genetic origin of Chao Lay coastal maritime populations from Thailand. | Kutanan W et al. | β | 2025 | β |
| Meta-analysis of uveal melanoma genome-wide association studies identifies novel risk loci and population effect size heterogeneity. | Mies G et al. | β | 2025 | β |
| Metagenomic Analysis Revealed Significant Changes in the Beef Cattle Rectum Microbiome Under Fescue Toxicosis. | Alfaro GF et al. | β | 2025 | β |
| Microplastic exposure is associated with epigenomic effects in the model organism Pimephales promelas (fathead minnow). | Wade MJ et al. | β | 2025 | β |
| Molecular analysis of androgen receptor splice variant AR-V3 reveals eminent ambiguity regarding activity and clinical utility. | WΓΌstmann N et al. | β | 2025 | β |
| Molecular epidemiology and genetic diversity of disappearing Plasmodium vivax in southern Thailand. | Tapaopong P et al. | β | 2025 | β |
| Molecular evolution of gustatory receptors in the Anopheles gambiae complex. | Popkin-Hall ZR et al. | β | 2025 | β |
| Molecular gradients shape synaptic specificity of a visuomotor transformation. | Dombrovski M et al. | β | 2025 | β |
| Morula complementation restores male germline in <i>NANOS2</i> null sheep. | McLean ZL et al. | β | 2025 | β |
| Multi-disciplinary evidence illuminates the speciation history of a monophyletic yet dimorphic lily group. | Feng Y et al. | β | 2025 | β |
| Multi-omics integration analysis and association study reveal the potential of ADIPOQ function in gestational diabetes mellitus. | Li X et al. | β | 2025 | β |
| Multiple genomic ancestries in the broom hare mark the complex biogeographic history of hares in the Iberian Peninsula. | Souto J et al. | β | 2025 | β |
| Multiple strategies association revealed functional candidate FASN gene for fatty acid composition in cattle. | Zhu B et al. | β | 2025 | β |
| Museomics and Salvaged Feathers Piece Together the Evolutionary History and Conservation Genomics of the Elusive, Critically Endangered Night Parrot (Pezoporus occidentalis). | Yeap HL et al. | β | 2025 | β |
| Mutagenesis of Highland barley (Hordeum vulgare L. Var. nudum) using nitrogen ion beam implantation: screening of phenotypic Var.ations and comparative transcriptome analysis. | Yu HY et al. | β | 2025 | β |
| Mycobacterium bovis frd operon phase variation hijacks succinate signaling to drive immunometabolic rewiring and pathogenicity. | Dong Y et al. | β | 2025 | β |
| Mycobacteroides abscessus subspecies: a comparative genomic analysis reveals unique metabolic activities and drug resistance patterns. | Wang X et al. | β | 2025 | β |
| N-Acetyl cysteine exhibits antimicrobial and anti-virulence activity against Salmonella enterica. | Hamed S et al. | β | 2025 | β |
| Natural Variations in Key Maturity Genes Underpin Soybean Cultivars Adaptation Beyond 50Β° N in Northeast China. | Jia H et al. | β | 2025 | β |
| Neolithic introgression of IL23R-related protection against chronic inflammatory bowel diseases in modern Europeans. | Krause-Kyora B et al. | β | 2025 | β |
| Neuronal ceroid lipofuscinosis type 5 in Russia: first case report and literature review. | Parshina OP et al. | β | 2025 | β |
| NewtCap: An Efficient Target Capture Approach to Boost Genomic Studies in Salamandridae (True Salamanders and Newts). | de Visser MC et al. | β | 2025 | β |
| Next-generation sequencing of circulating tumor DNA in cerebrospinal fluid for detecting gene mutations in central nervous system lymphoma patients. | Fu H et al. | β | 2025 | β |
| Next-Generation Snow Leopard Population Assessment Tool: Multiplex-PCR SNP Panel for Individual Identification From Faeces. | Solari KA et al. | β | 2025 | β |
| Non-Invasive Determination of the Paternal Inheritance in Pregnancies at Risk for Ξ²-Thalassaemia by Analyzing Cell-Free Fetal DNA Using Targeted Next-Generation Sequencing. | Byrou S et al. | β | 2025 | β |
| North Pontic crossroads: Mobility in Ukraine from the Bronze Age to the early modern period. | Saag L et al. | β | 2025 | β |
| OmniNeo: a multi-omics pipeline incorporating proteomics and AI selection for neoantigen optimization in tumor immunotherapy. | Lu M et al. | β | 2025 | β |
| On the origin of the late-flowering ppd-H1 allele in barley. | Sharma R et al. | β | 2025 | β |
| Opportunities and challenges of local ancestry in genetic association analyses. | Sun Q et al. | β | 2025 | β |
| Optimized CUT&RUN protocol for activated primary mouse B cells. | Ruiz SE et al. | β | 2025 | β |
| Out-of-Anatolia: Cultural and genetic interactions during the Neolithic expansion in the Aegean. | Koptekin D et al. | β | 2025 | β |
| PALB2 germline pathogenic variants: frequency, clinical features, and functional analysis of c.3350+5G>A variant in 3987 Korean cancer patients. | Kang MC et al. | β | 2025 | β |
| Pangenome analysis reveals yield- and fiber-related diversity and interspecific gene flow in Gossypium barbadense L. | Meng Q et al. | β | 2025 | β |
| Parallel loss of anthocyanins triggers the incipient sympatric speciation in an alpine ginger. | Zhou ZL et al. | β | 2025 | β |
| Patrilineages of ethnolinguistically diverse populations reveal multifactorial influences on Chinese paternal population stratification. | Yang T et al. | β | 2025 | β |
| Pf8: an open dataset of <i>Plasmodium falciparumΒ </i>genome variation in 33,325 worldwide samples. | Malaria Genomic Epidemiology Network (MalariaGEN) et al. | β | 2025 | β |
| Phased chromosome-level assembly provides insight into the genome architecture of hexaploid sweetpotato. | Wu S et al. | β | 2025 | β |
| Phenotypic Divergence and Genomic Architecture Between Parallel Ecotypes at Two Different Points on the Speciation Continuum in a Marine Snail. | Raffini F et al. | β | 2025 | β |
| Phylogenetic origin of dioecious Callicarpa (Lamiaceae) species endemic to the Ogasawara Islands revealed by chloroplast and nuclear whole genome analyses. | Masuda K et al. | β | 2025 | β |
| Phylogenetic proximity is a key driver of temporal succession of marine giant viruses in a five-year metagenomic time-series. | Laperriere SM et al. | β | 2025 | β |
| Phylogenetic relationships and the identification of allopolyploidy in circumpolar Silene sect. Physolychnis. | Quatela AS et al. | β | 2025 | β |
| Phylogenetic Signal in Primate Tooth Enamel Proteins and its Relevance for Paleoproteomics. | Fong-Zazueta R et al. | β | 2025 | β |
| Phylogenomic analysis of African swine fever virus from the Philippines. | Ko SKK et al. | β | 2025 | β |
| Phylogenomic Analysis of Wide-Ranging Least Shrews Refines Conservation Priorities and Supports a Paradigm for Evolution of Biota Spanning Eastern North America and Mesoamerica. | Galfano TM et al. | β | 2025 | β |
| Phylogenomics Resolves Deep Phylogenetic Uncertainties and Hybridization in Rapidly Radiated Horseshoe Bats (Rhinolophus). | Yang S et al. | β | 2025 | β |
| Phylogenomics resolves the puzzling phylogeny of banded newts (genus Ommatotriton). | Kalaentzis K et al. | β | 2025 | β |
| Phylogeography of introgression: Spatial and temporal analyses identify two introgression events between brown and American black bears. | Puckett EE | β | 2025 | β |
| Pipeline for Antimicrobial Resistance Gene Quantification from Host Tissue. | Svaren LM et al. | β | 2025 | β |
| Polygenic risk score and prostate specific antigen predict death from prostate cancer in men with intermediate aggressive cancer. | Santiago LR et al. | β | 2025 | β |
| Polymorphism-driven transcriptomic changes in anthelmintic metabolism pathways of Anisakis simplex s.s. L3 larvae. | MaΕΊdziarz M et al. | β | 2025 | β |
| Population Genomic Analysis of Two Independent Clonal Invasions of the Sudden Oak Death Pathogen into One Forest. | Cauldron NC et al. | β | 2025 | β |
| Population genomics elucidates the trajectory of chicken domestication from Asia to Japan. | Matsuda Y et al. | β | 2025 | β |
| Population genomics of a sailing siphonophore reveals genetic structure in the open ocean. | Church SH et al. | β | 2025 | β |
| Population Genomics Provides Insights Into Genomic Features of Inbreeding Depression in <i>Arma Chinensis</i>. | Li B et al. | β | 2025 | β |
| Population-genomics reveals a dual ancestry of grizzly bears. | de Jong MJ et al. | β | 2025 | β |
| Population Genomics Reveals Local Adaptation Related to Temperature Variation in Two Stream Frog Species: Implications for Vulnerability to Climate Warming. | Forester BR et al. | β | 2025 | β |
| Population-Specific Differences in Pathogenic Variants of Genes Associated with Monogenic Parkinson's Disease. | Flores-Ocampo V et al. | β | 2025 | β |
| Postglacial History of a Widespread Wood-Decaying Fungus in Europe Suggests Migration out of Multiple Refugia Followed by Admixture. | Lu DS et al. | β | 2025 | β |
| Predicting high confidence ctDNA somatic variants with ensemble machine learning models. | Maruzani R et al. | β | 2025 | β |
| Prediction of protein structural changes mediated by NS-SNPs in antibiotic resistance determinants in Streptococcus pneumoniae. | Liu W et al. | β | 2025 | β |
| Protein-based classification reveals an immune-hot subtype in IDH mutant astrocytoma with worse prognosis. | Tang J et al. | β | 2025 | β |
| Protocol for genetic load analysis in caribou using a modified genomic evolutionary rate profiling. | Taylor RS et al. | β | 2025 | β |
| Pseudomonas aeruginosa PfpI is a methylglyoxalase. | Grimm L et al. | β | 2025 | β |
| PVGA: a precise viral genome assembler using an iterative alignment graph. | Song Z et al. | β | 2025 | β |
| QTN detection and candidate gene identification for improved eating and cooking quality in rice using GWAS and PLS regression analysis. | Hori K et al. | β | 2025 | β |
| Quaternary Glaciation Accelerates Speciation in Aquatic Snakes Through Recent Bottlenecks. | Ren JL et al. | β | 2025 | β |
| Rampant Reticulation in a Rapid Radiation of Tropical Trees-Insights from Inga (Fabaceae). | Schley RJ et al. | β | 2025 | β |
| Range-wide climate risk and adaptive potential in a cold-water fish species. | Meek MH et al. | β | 2025 | β |
| Rare recombination in Salix nivalis and the maintenance of homomorphic sex chromosomes in willows. | Khanal A et al. | β | 2025 | β |
| Rare variant associations with birth weight identify genes involved in adipose tissue regulation, placental function and insulin-like growth factor signalling. | Kentistou KA et al. | β | 2025 | β |
| Reactivation of hidden-latent <i>Brucella</i> infection after doxycycline and streptomycin treatment in mice. | Sancho-SΓ‘nchez E et al. | β | 2025 | β |
| Recent Divergence and Microgeographic Genetic Structure in an Endangered Australian Songbird: The Southern Black-Throated Finch. | Hooper DM et al. | β | 2025 | β |
| Recent neo-X and Y sex chromosomes in an ant cricket. | MΓ©rel V et al. | β | 2025 | β |
| Recombinant infectious bronchitis virus containing mutations in non-structural proteins 10, 14, 15, and 16 and within the macrodomain provides complete protection against homologous challenge. | Keep S et al. | β | 2025 | β |
| Reconstruction of the X and Y haplotypes in the genetically improved Abbassa nile tilapia genome assembly. | Etherington G et al. | β | 2025 | β |
| Red Deer Resequencing Reveals the Importance of Sex Chromosomes for Reconstructing Late Quaternary Events. | de Jong MJ et al. | β | 2025 | β |
| Regional antimicrobial resistance gene flow among the One Health sectors in China. | Feng Y et al. | β | 2025 | β |
| Relaxation of selective constraint on the sweet-taste receptor gene TAS1R2 in lorisiform primates. | Ji Q et al. | β | 2025 | β |
| Reproductive Barriers and Genomic Hotspots of Adaptation During Allopatric Species Divergence. | Deshmukh R et al. | β | 2025 | β |
| Resequencing and phenotyping of the first highly inbred eggplant multiparent population reveal <i>SmLBD13</i> as a key gene associated with root morphology. | Arrones A et al. | β | 2025 | β |
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| Revealing the potential transmission route of Cnaphalocrocis medinalis granulovirus capable of persistently causing granulosis epidemics. | Chen B et al. | β | 2025 | β |
| Revisiting the dispersal history of walnut by analyzing the ancient DNA of walnut remains in Xinjiang, China. | Zhang B et al. | β | 2025 | β |
| Risk Prediction of RNA Off-Targets of CRISPR Base Editors in Tissue-Specific Transcriptomes Using Language Models. | Nakamae K et al. | β | 2025 | β |
| Robust Sensory Traits Across Light Habitats: Visual Signals but Not Receptors Vary in Centrarchids Inhabiting Distinct Photic Environments. | Bertinetti C et al. | β | 2025 | β |
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| Saturating the eQTL map in Drosophila: Genome-wide patterns of cis and trans regulation of transcriptional variation in outbred populations. | Pallares LF et al. | β | 2025 | β |
| Seed shattering in common buckwheat (Fagopyrum esculentum): insights from RNA-seq and morphological analysis. | Gunko EM et al. | β | 2025 | β |
| Segregation Between an Ornamental and a Disease Driver Gene Provides Insights Into Pigment Cell Regulation. | Soria E et al. | β | 2025 | β |
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| SimGBS: a rapid method for simulating large-scale genotyping-by-sequencing data. | Kang J et al. | β | 2025 | β |
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| Single-cell RNA sequencing in osteosarcoma: applications in diagnosis, prognosis, and treatment. | Asmar C et al. | β | 2025 | β |
| Single-cell transcriptomics reveals the interaction between fibroblasts and activated immune cells: an exploratory bioinformatics study of pro-inflammatory mechanisms in slow transit constipation. | Chi F et al. | β | 2025 | β |
| Small Interfering RNA Therapy Targeting the Long Noncoding RNA SMILR for Therapeutic Intervention in Coronary Artery Bypass Graft Failure. | Brown SD et al. | β | 2025 | β |
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| Somatic <i>TEK</i> Mutation Identified in a Patient with Calvarial Venous Malformations. | Fan B et al. | β | 2025 | β |
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| Super pangenome of Vitis empowers identification of downy mildew resistance genes for grapevine improvement. | Guo L et al. | β | 2025 | β |
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| The genetic diversity of Indonesian cattle has been shaped by multiple introductions and adaptive introgression. | Wang X et al. | β | 2025 | β |
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| The genome and GeneBank genomics of allotetraploid Nicotiana tabacum provide insights into genome evolution and complex trait regulation. | Zan Y et al. | β | 2025 | β |
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| The Prospective Registry of MyositIS (PROMIS): I. Next-generation sequencing identifies HLA-DQA1 as a novel genetic risk of anti-MDA5 antibody-positive dermatomyositis. | Yang X et al. | β | 2025 | β |
| The relationships among alkaloid concentration, endophyte mycelial concentration and host genetics in the tall fescue EpichloΓ« symbiosis. | Talamantes DR et al. | β | 2025 | β |
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| The Roles of Life History and Mating System in Speciation: Genomic Evidence From the Incarvillea sinensis Complex. | Lan WJ et al. | β | 2025 | β |
| The unique morphological basis and repeated evolutionary origins of personate flowers in Penstemon. | Depatie TH et al. | β | 2025 | β |
| The winner takes it all: a single genotype of Kalanchoe Γ houghtonii is a global invader. | Pascual-DΓaz JP et al. | β | 2025 | β |
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| Tracing the evolutionary history of the CCR5delta32 deletion via ancient and modern genomes. | Ravn K et al. | β | 2025 | β |
| Transcription factor MdHB52 mediates phosphorus uptake by regulating methyl jasmonate secretion in apple rootstock. | Zhao X et al. | β | 2025 | β |
| Transcription factors instruct DNA methylation patterns in plant reproductive tissues. | Xu G et al. | β | 2025 | β |
| Transcriptome Analysis of Muscle Growth-Related circRNA in the Pacific Abalone <i>Haliotis discus hanna</i>. | Huang J et al. | β | 2025 | β |
| Transcriptome High-Throughput Sequencing Analysis of lncRNA and mRNA Expression in Patients with Coronary Slow Flow. | Jiang H et al. | β | 2025 | β |
| Transcriptomic analysis of benznidazole-resistant Trypanosoma cruzi clone reveals nitroreductase I-independent resistance mechanisms. | MejΓa-Jaramillo AM et al. | β | 2025 | β |
| TRMT1L-catalyzed m<sup>2</sup><sub>2</sub>G27 on tyrosine tRNA is required for efficient mRNA translation and cell survival under oxidative stress. | Hwang SP et al. | β | 2025 | β |
| Two coding-complete genomes of porcine reproductive and respiratory syndrome virus 2 (PRRSV-2) from field clinical samples in the Philippines. | Montecillo A et al. | β | 2025 | β |
| Unexpected absence of a multiple-queen supergene haplotype from supercolonial populations of Formica ants. | Lagunas-Robles G et al. | β | 2025 | β |
| Unprecedented female mutation bias in the aye-aye, a highly unusual lemur from Madagascar. | Wang RJ et al. | β | 2025 | β |
| Unraveling species diversification and niche separation in Phedimus Kamtschaticus and P. aizoon using RAD-seq data and ecological niche modeling. | Choi TY et al. | β | 2025 | β |
| Unravelling the genetic architecture of soybean tofu quality traits. | DΓΆttinger CA et al. | β | 2025 | β |
| Unravelling Wood Extractive Resistance in Phanerochaete chrysosporium Through Random Mutagenesis. | Noel D et al. | β | 2025 | β |
| Using a novel panel of drug-resistant triple-negative breast cancer cell lines to identify candidate therapeutic targets and biomarkers. | Grimsley HE et al. | β | 2025 | β |
| vcfgl: a flexible genotype likelihood simulator for VCF/BCF files. | Altinkaya I et al. | β | 2025 | β |
| Vesicular and non-vesicular extracellular small RNAs direct gene silencing in a plant-interacting bacterium. | Ravet A et al. | β | 2025 | β |
| WES-Based Screening of a Swedish Patient Series with Parkinson's Disease. | Kafantari E et al. | β | 2025 | β |
| Wet Season Environments Drive Local Adaptation in the Timber Tree Dicorynia guianensis in French Guiana. | Bonnier J et al. | β | 2025 | β |
| Whole genome sequence analysis of <i>Helicobacter pylori</i> isolates reveals incomplete characterization of antimicrobial resistance mechanisms. | Vieni C et al. | β | 2025 | β |
| Whole genome sequencing-based detection of extensively drug-resistant tuberculosis from Ethiopia. | Diriba G et al. | β | 2025 | β |
| Whole genome sequencing informs SNP-based breeding strategies to safeguard genetic diversity in captive African lions. | Chen W et al. | β | 2025 | β |
| Whole-Genome Sequencing of Linezolid-Resistant and Linezolid-Intermediate-Susceptibility <i>Enterococcus faecalis</i> Clinical Isolates in a Mexican Tertiary Care University Hospital. | MartΓnez-Ayala P et al. | β | 2025 | β |
| Whole-Genome Structural Variations Study in a Severe Acne Family. | Feng J et al. | β | 2025 | β |
| Within-species floral evolution reveals convergence in adaptive walks during incipient pollinator shift. | Wenzell KE et al. | β | 2025 | β |
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| A chromosome-level genome assembly of the heteronomous hyperparasitoid wasp Encarsia sophia. | Man X et al. | β | 2024 | β |
| A chromosome-scale genome assembly of Timorese crabgrass (Digitaria radicosa): a useful genomic resource for the Poaceae. | Minoji K et al. | β | 2024 | β |
| A citric acid cycle-deficient Escherichia coli as an efficient chassis for aerobic fermentations. | Zhou H et al. | β | 2024 | β |
| A comprehensive benchmark of graph-based genetic variant genotyping algorithms on plant genomes for creating an accurate ensemble pipeline. | Du ZZ et al. | β | 2024 | β |
| A comprehensive map of copy number variations in dromedary camels based on whole genome sequence data. | Bahbahani H et al. | β | 2024 | β |
| Across a phylogeographic break in the Qinling Mountains-Huaihe River Line: Quaternary evolutionary history of a medicinal and edible homologous plant (Allium macrostemon) in China. | Jiang C et al. | β | 2024 | β |
| A CTCF-binding site in the Mdm1-Il22-Ifng locus shapes cytokine expression profiles and plays a critical role in early Th1 cell fate specification. | Liu C et al. | β | 2024 | β |
| Adaptation to seasonal reproduction and environment-associated factors drive temporal and spatial differentiation in northwest Atlantic herring despite gene flow. | Fuentes-Pardo AP et al. | β | 2024 | β |
| Adaptive gene loss in the common bean pan-genome during range expansion and domestication. | Cortinovis G et al. | β | 2024 | β |
| A genetic basis for sex differences in Xp11 translocation renal cell carcinoma. | Achom M et al. | β | 2024 | β |
| A genome assembly and transcriptome atlas of the inbred Babraham pig to illuminate porcine immunogenetic variation. | Schwartz JC et al. | β | 2024 | β |
| A Genomics England haplotype reference panel and imputation of UK Biobank. | Shi S et al. | β | 2024 | β |
| A High-Coverage Mesolithic Aurochs Genome and Effective Leveraging of Ancient Cattle Genomes Using Whole Genome Imputation. | Erven JAM et al. | β | 2024 | β |
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| AIRE relies on Z-DNA to flag gene targets for thymic T cell tolerization. | Fang Y et al. | β | 2024 | β |
| A large-scale screening identified in USH2A gene the P3272L founder pathogenic variant explaining familial Usher syndrome in Sardinia, Italy. | Serra R et al. | β | 2024 | β |
| A large-scale type I CBASS antiphage screen identifies the phage prohead protease as a key determinant of immune activation and evasion. | Richmond-Buccola D et al. | β | 2024 | β |
| Altered dNTP pools accelerate tumor formation in mice. | Tran P et al. | β | 2024 | β |
| A macroevolutionary role for chromosomal fusion and fission in <i>Erebia</i> butterflies. | Augustijnen H et al. | β | 2024 | β |
| [Analysis of changes in the genome of the Omsk hemorrhagic fever virus (Flaviviridae: <i>Orthoflavivirus</i>) during laboratory practices for virus preservation]. | Tyulko ZS et al. | β | 2024 | β |
| Analysis of cis-regulatory changes underlying phenotype divergence shaped by domestication in pigs. | Liu C et al. | β | 2024 | β |
| Analysis of SARS-CoV-2 omicron mutations that emerged during long-term replication in a lung cancer xenograft mouse model. | Baek K et al. | β | 2024 | β |
| Analytical Performance of a Novel Nanopore Sequencing for SARS-CoV-2 Genomic Surveillance. | Maimaiti M et al. | β | 2024 | β |
| A naturally occurring canine model of syndromic congenital microphthalmia. | Murgiano L et al. | β | 2024 | β |
| Ancestry dynamics and trait selection in a designer cat breed. | Kaelin CB et al. | β | 2024 | β |
| A new cell culture resource for investigations of reptilian gene function. | Samudra SP et al. | β | 2024 | β |
| A new species of giant gecko of the genus Rhacodactylus from New Caledonia (Squamata, Gekkota, Diplodactylidae). | KΓΆhler G et al. | β | 2024 | β |
| A Next Generation of Hierarchical Bayesian Analyses of Hybrid Zones Enables Model-Based Quantification of Variation in Introgression in R. | Gompert Z et al. | β | 2024 | β |
| A noncoding regulatory variant in IKZF1 increases acute lymphoblastic leukemia risk in Hispanic/Latino children. | de Smith AJ et al. | β | 2024 | β |
| An Orphan Gene Enhances Male Reproductive Success in Plutella xylostella. | Zhao Q et al. | β | 2024 | β |
| A pipeline for identification of causal mutations in barley identifies Xantha-j as the chlorophyll synthase gene. | Stuart D et al. | β | 2024 | β |
| A platform for rapid patient-derived cutaneous neurofibroma organoid establishment and screening. | Nguyen HTL et al. | β | 2024 | β |
| A population genomics approach to unlock the genetic potential of lablab (Lablab purpureus (L.) Sweet), an underutilized tropical forage crop. | Teshome A et al. | β | 2024 | β |
| A potent pan-sarbecovirus neutralizing antibody resilient to epitope diversification. | Rosen LE et al. | β | 2024 | β |
| A Protocol to Extract a Specific Genomic Region from a Public Whole-Genome Database and Modify Analytical Bin Length for Population Genetic Studies. | Akhtar MS et al. | β | 2024 | β |
| A rapid approach for sex assignment by RAD-seq using a reference genome. | Peralta DM et al. | β | 2024 | β |
| A role for the stringent response in ciprofloxacin resistance in Pseudomonas aeruginosa. | GarcΓa-Villada L et al. | β | 2024 | β |
| Association of rare and common genetic variants in MOCOS with inadequate response to allopurinol. | Fanning NC et al. | β | 2024 | β |
| Average nucleotide identity-based <i>Staphylococcus aureus</i> strain grouping allows identification of strain-specific genes in the pangenome. | Raghuram V et al. | β | 2024 | β |
| Benchmarking bioinformatic virus identification tools using real-world metagenomic data across biomes. | Wu LY et al. | β | 2024 | β |
| Benchmarking bulk and single-cell variant-calling approaches on Chromium scRNA-seq and scATAC-seq libraries. | Wiens M et al. | β | 2024 | β |
| Benchmarking kinship estimation tools for ancient genomes using pedigree simulations. | AktΓΌrk Ε et al. | β | 2024 | β |
| Benchmarking short-, long- and hybrid-read assemblers for metagenome sequencing of complex microbial communities. | Goussarov G et al. | β | 2024 | β |
| Benchmarking UMI-aware and standard variant callers for low frequency ctDNA variant detection. | Maruzani R et al. | β | 2024 | β |
| Biased Gene Introgression and Adaptation in the Face of Chloroplast Capture in Aquilegia amurensis. | Wang H et al. | β | 2024 | β |
| Boolean Modeling of Biological Network Applied to Protein-Protein Interaction Network of Autism Patients. | Nezamuldeen L et al. | β | 2024 | β |
| Bromodomain inhibitor treatment leads to overexpression of multiple kinases in cancer cells. | Chandrashekar DS et al. | β | 2024 | β |
| Capitalizing on genebank core collections for rare and novel disease resistance loci to enhance barley resilience. | Yuan Z et al. | β | 2024 | β |
| Carbon usage in yellow-fleshed Manihot esculenta storage roots shifts from starch biosynthesis to cell wall and raffinose biosynthesis via the myo-inositol pathway. | Gutschker S et al. | β | 2024 | β |
| cGMP-dependent pathway and a GPCR kinase are required for photoresponse in the nematode Pristionchus pacificus. | Nakayama K et al. | β | 2024 | β |
| Characterization and distribution of a 14-Mb chromosomal inversion in native populations of rainbow trout (Oncorhynchus mykiss). | Hale MC et al. | β | 2024 | β |
| Characterization of Reference Materials for DPYD: A GeT-RM Collaborative Project. | Gaedigk A et al. | β | 2024 | β |
| Chloroplast genome-based genetic resources via genome skimming for the subalpine forests of Japan and adjacent regions. | Worth JRP et al. | β | 2024 | β |
| Chromosome-level genome assemblies reveal genome evolution of an invasive plant Phragmites australis. | Wang C et al. | β | 2024 | β |
| Chromosome-scale genome assembly of acerola (Malpighia emarginata DC.). | Shirasawa K et al. | β | 2024 | β |
| Clinging on the brink: Whole genomes reveal human-induced population declines and severe inbreeding in the Critically Endangered Emirati Leaf-toed Gecko (Asaccus caudivolvulus). | Burriel-Carranza B et al. | β | 2024 | β |
| Clinical significance of the genetically variable landscape of the gut microbiome in patients with gestational diabetes mellitus patients. | Zhang K et al. | β | 2024 | β |
| Co-evolution of vaginal microbiome and cervical cancer. | Hu M et al. | β | 2024 | β |
| Colonial-driven extinction of the blue antelope despite genomic adaptation to low population size. | Hempel E et al. | β | 2024 | β |
| Combined transcriptomic and ChIPseq analyses of the <i>Bordetella pertussis</i> RisA regulon. | Coutte L et al. | β | 2024 | β |
| Combining machine learning with high-content imaging to infer ciprofloxacin susceptibility in isolates of Salmonella Typhimurium. | Tran TA et al. | β | 2024 | β |
| Combining Short- and Long-Read Sequencing Technologies to Identify SARS-CoV-2 Variants in Wastewater. | Jayme G et al. | β | 2024 | β |
| Comparative analysis of whole exome sequencing kits for the canine genome. | Jang J et al. | β | 2024 | β |
| Complete genome sequence of an Indian outbreak strain of chikungunya virus. | Laha E et al. | β | 2024 | β |
| Complete genome sequences of <i>Geobacillus stearothermophilus</i> strains EF60045 and SJEF4-2 from Korean hot springs. | Sung J-Y et al. | β | 2024 | β |
| Complete Genomic Landscape Reveals Hidden Evolutionary History and Selection Signature in Asian Water Buffaloes (Bubalus bubalis). | Si J et al. | β | 2024 | β |
| Complex Genomic Landscape of Inversion Polymorphism in Europe's Most Destructive Forest Pest. | Mykhailenko A et al. | β | 2024 | β |
| Construction of relatedness matrices in autopolyploid populations using low-depth high-throughput sequencing data. | Bilton TP et al. | β | 2024 | β |
| Contrasting demographic history and mutational load in three threatened whitebark pines (Pinus subsect. Gerardianae): implications for conservation. | Kou YX et al. | β | 2024 | β |
| Contrasting the role of historic factors in phylogeograpic patterns in the native Johnny darter (<i>Etheostoma nigrum</i>) and invasive round goby (<i>Neogobius melanostomus</i>) in lower michigan. | Wicks AJ et al. | β | 2024 | β |
| Contributions of Germline and Somatic Mosaic Genetics to Thoracic Aortic Aneurysms in Nonsyndromic Individuals. | Chen MH et al. | β | 2024 | β |
| Cost-effective genomic prediction of critical economic traits in sturgeons through low-coverage sequencing. | Song H et al. | β | 2024 | β |
| Cryptic hybridization between the ancient lineages of Natterer's bat (Myotis nattereri). | JosiΔ D et al. | β | 2024 | β |
| Cutaneous Wound Healing and the Effects of Cannabidiol. | Shah P et al. | β | 2024 | β |
| CXCR4 orchestrates the TOX-programmed exhausted phenotype of CD8<sup>+</sup> TΒ cells via JAK2/STAT3 pathway. | Cao C et al. | β | 2024 | β |
| Deep longitudinal lower respiratory tract microbiome profiling reveals genome-resolved functional and evolutionary dynamics in critical illness. | Cheng M et al. | β | 2024 | β |
| Deep population structure linked to host vernalization requirement in the barley net blotch fungal pathogen. | RamΓrez MartΓnez J et al. | β | 2024 | β |
| Demultiplexing of single-cell RNA-sequencing data using interindividual variation in gene expression. | Nassiri I et al. | β | 2024 | β |
| De novo transcriptomes of cave and surface isopod crustaceans: insights from 11 species across three suborders. | JovoviΔ L et al. | β | 2024 | β |
| Detection of dengue virus serotype 4 in Panama after 23 years without circulation. | Chen-GermΓ‘n M et al. | β | 2024 | β |
| Development and validation of a 66K SNP array for the hard clam (Mercenaria mercenaria). | Grouzdev D et al. | β | 2024 | β |
| Different control of resistance to two Colletotrichum orbiculare pathogenic races 0 and 1 in cucumber (Cucumis sativus L.). | Fitriyah F et al. | β | 2024 | β |
| Distribution and genetic diversity of Bombyx mori nucleopolyhedrovirus in mass-reared silkworms in Thailand. | Wennmann JT et al. | β | 2024 | β |
| Diverse Origins of Near-Identical Antifreeze Proteins in Unrelated Fish Lineages Provide Insights Into Evolutionary Mechanisms of New Gene Birth and Protein Sequence Convergence. | Rives N et al. | β | 2024 | β |
| Diverse RNA viruses of parasitic nematodes can elicit antibody responses in vertebrate hosts. | Quek S et al. | β | 2024 | β |
| Draft Genome of Akame (Lates Japonicus) Reveals Possible Genetic Mechanisms for Long-Term Persistence and Adaptive Evolution with Low Genetic Diversity. | Hashiguchi Y et al. | β | 2024 | β |
| Drivers of genomic differentiation landscapes in populations of disparate ecological and geographical settings within mainland Apis cerana. | Dong J et al. | β | 2024 | β |
| Drought-induced molecular changes in crown of various barley phytohormone mutants. | KuczyΕska A et al. | β | 2024 | β |
| Dysregulation of CD4<sup>+</sup> and CD8<sup>+</sup> resident memory T, myeloid, and stromal cells in steroid-experienced, checkpoint inhibitor colitis. | He JY et al. | β | 2024 | β |
| Effects of Angiotensin-I-Converting Enzyme (ACE) Mutations Associated with Alzheimer's Disease on Blood ACE Phenotype. | Kryukova OV et al. | β | 2024 | β |
| Effects of trimer repeats on Psidium guajava L. gene expression and prospection of functional microsatellite markers. | Pires GP et al. | β | 2024 | β |
| Elevated mutation rates in multi-azole resistant Aspergillus fumigatus drive rapid evolution of antifungal resistance. | Bottery MJ et al. | β | 2024 | β |
| Emergence of enhancers at late DNA replicating regions. | Cornejo-PΓ‘ramo P et al. | β | 2024 | β |
| Enhanced pollen tube performance at high temperature contributes to thermotolerant fruit and seed production in tomato. | Ouonkap SVY et al. | β | 2024 | β |
| Environmental genome-wide association studies across precipitation regimes reveal that the E3 ubiquitin ligase MBR1 regulates plant adaptation to rainy environments. | Castellana S et al. | β | 2024 | β |
| Environmental radiation exposure at Chornobyl has not systematically affected the genomes or chemical mutagen tolerance phenotypes of local worms. | Tintori SC et al. | β | 2024 | β |
| Epigenetic alterations affecting hematopoietic regulatory networks as drivers of mixed myeloid/lymphoid leukemia. | Mulet-Lazaro R et al. | β | 2024 | β |
| Establishment of primary prostate epithelial and tumorigenic cell lines using a non-viral immortalization approach. | Lange S et al. | β | 2024 | β |
| European farmhouse brewing yeasts form a distinct genetic group. | Preiss R et al. | β | 2024 | β |
| Evaluating the Efficacy of Target Capture Sequencing for Genotyping in Cattle. | Ren Y et al. | β | 2024 | β |
| Evaluation of Aedes aegypti control intervention with pyriproxyfen by lcWGS in Manacapuru, Amazonas, Brazil. | Leles LFO et al. | β | 2024 | β |
| Evaluation of genotype imputation using Glimpse tools on low coverage ancient DNA. | Γubukcu H et al. | β | 2024 | β |
| Evidence for feminized genetic males in a flea beetle using newly identified X-linked markers. | Rohlfing K et al. | β | 2024 | β |
| Evolution and host-specific adaptation of <i>Pseudomonas aeruginosa</i>. | Weimann A et al. | β | 2024 | β |
| Evolution and legacy of East Asian aurochs. | Hou J et al. | β | 2024 | β |
| Evolution and strain diversity advance exploration of <i>Candida albicans</i> biology. | Anderson MZ et al. | β | 2024 | β |
| Evolutionary radiation of the Eurasian Pinus species under pervasive gene flow. | Zhao W et al. | β | 2024 | β |
| Evolutionary Rate Shifts in Coding and Regulatory Regions Underpin Repeated Adaptation to Sulfidic Streams in Poeciliid Fishes. | De-Kayne R et al. | β | 2024 | β |
| Evolution of Transcript Abundance is Influenced by Indels in Protein Low Complexity Regions. | Dickson ZW et al. | β | 2024 | β |
| Evolution of unexpected diversity in a putative mating type locus and its correlation with genome variability reveals likely asexuality in the model mycorrhizal fungus Rhizophagus irregularis. | Lee SJ et al. | β | 2024 | β |
| Exceptional Evolution of a Squamous Odontogenic Tumor in the Jaw: Molecular Approach. | Alonso-Juarranz M et al. | β | 2024 | β |
| Exome-wide evidence of compound heterozygous effects across common phenotypes in the UK Biobank. | Lassen FH et al. | β | 2024 | β |
| Exploring the extrachromosomal plasmid rDNA of Naegleria fowleri AY27 genotype II: A human brain-eating amoeba via high-throughput sequencing. | Aurongzeb M et al. | β | 2024 | β |
| Extant and extinct bilby genomes combined with Indigenous knowledge improve conservation of a unique Australian marsupial. | Hogg CJ et al. | β | 2024 | β |
| Fast and accurate variant identification tool for sequencing-based studies. | Gaston JM et al. | β | 2024 | β |
| Footprints of innate immune activity during HIV-1 reservoir cell evolution in early-treated infection. | Sun W et al. | β | 2024 | β |
| Functional characteristics and computational model of abundant hyperactive loci in the human genome. | Hudaiberdiev S et al. | β | 2024 | β |
| Gelada genomes highlight events of gene flow, hybridisation and local adaptation that track past climatic changes. | Caldon M et al. | β | 2024 | β |
| Genetic background of primary and familial HLH in Qatar: registry data and population study. | Elgaali E et al. | β | 2024 | β |
| Genetic constitution and variability in synthetic populations of intermediate wheatgrass, an outcrossing perennial grain crop. | Bajgain P et al. | β | 2024 | β |
| Genetic Diversity and Genome-Wide Association Study of Total Phenolics, Flavonoids, and Antioxidant Properties in Potatoes (<i>Solanum tuberosum</i> L.). | Rasheed H et al. | β | 2024 | β |
| Genetic diversity, population structure, and phylogeny of insular Spanish pepper landraces (<i>Capsicum annuum</i> L.) through phenotyping and genotyping-by-sequencing. | Ortega-Albero N et al. | β | 2024 | β |
| Genetic mapping of deoxynivalenol and fusarium damaged kernel resistance in an adapted durum wheat population. | Berraies S et al. | β | 2024 | β |
| Genetics in the Ocean's Twilight Zone: Population Structure of the Glacier Lanternfish Across Its Distribution Range. | Quintela M et al. | β | 2024 | β |
| Genetic testing of BehΓ§et's disease using next-generation sequencing to identify monogenic mimics and HLA-B*51. | Burleigh A et al. | β | 2024 | β |
| Genetic, transcriptomic, histological, and biochemical analysis of progressive supranuclear palsy implicates glial activation and novel risk genes. | Farrell K et al. | β | 2024 | β |
| Genome divergence and reproductive incompatibility among populations of Ganaspis near brasiliensis. | Hopper KR et al. | β | 2024 | β |
| Genome sequencing, comparative analysis, and gene expression responses of cytochrome P450 genes in <i>Oryzias curvinotus</i> provide insights into environmental adaptation. | Li M et al. | β | 2024 | β |
| Genome-wide association mapping in exotic Γ Canadian elite crosses: mining beneficial alleles for agronomic and seed composition traits in soybean. | Fortune K et al. | β | 2024 | β |
| Genome-wide detection of runs of homozygosity and heterozygosity in Tunchang pigs. | Liu SQ et al. | β | 2024 | β |
| Genome-wide quantification of RNA flow across subcellular compartments reveals determinants of the mammalian transcript life cycle. | Ietswaart R et al. | β | 2024 | β |
| Genomic analysis of global Plasmodium vivax populations reveals insights into the evolution of drug resistance. | Ngwana-Joseph GC et al. | β | 2024 | β |
| Genomic analysis of human brain metastases treated with stereotactic radiosurgery reveals unique signature based on treatment failure. | Shireman JM et al. | β | 2024 | β |
| Genomic analysis reveals deep population divergence in the water snake <i>Trimerodytes percarinatus</i> (Serpentes, Natricidae). | Lyu B et al. | β | 2024 | β |
| Genomic changes and stabilization following homoploid hybrid speciation of the Oxford ragwort Senecio squalidus. | Nevado B et al. | β | 2024 | β |
| Genomic Characterization of Quality Wool Traits in Spanish Merino Sheep. | Anaya G et al. | β | 2024 | β |
| Genomic data provides insights into the evolutionary history and adaptive differentiation of two tetraploid strawberries. | Lin H et al. | β | 2024 | β |
| Genomic determinants, architecture, and constraints in drought-related traits in Corymbia calophylla. | Ahrens CW et al. | β | 2024 | β |
| Genomic imputation of ancient Asian populations contrasts local adaptation in pre- and post-agricultural Japan. | Cooke NP et al. | β | 2024 | β |
| Genomic insights into local adaptation and vulnerability of Quercus longinux to climate change. | Sun PW et al. | β | 2024 | β |
| Genomic insights into Neolithic founding paternal lineages around the Qinghai-Xizang Plateau using integrated YanHuang resource. | Wang M et al. | β | 2024 | β |
| Genomic insights into the origin and evolution of spelt (Triticum spelta L.) as a valuable gene pool for modern wheat breeding. | Wang Y et al. | β | 2024 | β |
| Genomic sequencing of 10 spore-forming <i>Bacilli</i> strains isolated from zoo-dwelling mice. | Hashuel R et al. | β | 2024 | β |
| Genomic variation across distribution of Micro-Tom, a model cultivar of tomato (Solanum lycopersicum). | Nagasaki H et al. | β | 2024 | β |
| Genomic variation of European beech reveals signals of local adaptation despite high levels of phenotypic plasticity. | Lazic D et al. | β | 2024 | β |
| Germline variant profiling of CHEK2 sequencing variants in breast cancer patients. | McCarthy-Leo C et al. | β | 2024 | β |
| Giraffe lineages are shaped by major ancient admixture events. | Bertola LD et al. | β | 2024 | β |
| GraphSlimmer: Preserving Read Mappability with the Minimum Number of Variants. | Tavakoli N et al. | β | 2024 | β |
| GWAS of multiple neuropathology endophenotypes identifies new risk loci and provides insights into the genetic risk of dementia. | Shade LMP et al. | β | 2024 | β |
| HaplotagLR: An efficient and configurable utility for haplotagging long reads. | Holmes MJ et al. | β | 2024 | β |
| Haplotype-based pangenomes reveal genetic variations and climate adaptations in moso bamboo populations. | Hou Y et al. | β | 2024 | β |
| Haplotype-resolved assembly of a pig genome using single-sperm sequencing. | Niu Y et al. | β | 2024 | β |
| Haplotype-resolved genome and population genomics of the threatened garden dormouse in Europe. | Byerly PA et al. | β | 2024 | β |
| Harvesting and amplifying gene cassettes confers cross-resistance to critically important antibiotics. | Dulyayangkul P et al. | β | 2024 | β |
| Heterogeneous genomic architecture of skeletal armour traits in sticklebacks. | Yi X et al. | β | 2024 | β |
| Heterogeneous Group of Genetically Determined Auditory Neuropathy Spectrum Disorders. | Buianova AA et al. | β | 2024 | β |
| High-density genetic linkage mapping in Sitka spruce advances the integration of genomic resources in conifers. | Tumas H et al. | β | 2024 | β |
| High performance TadA-8e derived cytosine and dual base editors with undetectable off-target effects in plants. | Fan T et al. | β | 2024 | β |
| High prevalence of fecal carriage of extended-spectrum beta-lactamase producing <i>Enterobacterales</i> among patients with urinary tract infections in rural Tanzania. | Macha ME et al. | β | 2024 | β |
| High-resolution functional mapping of RAD51C by saturation genome editing. | Olvera-LeΓ³n R et al. | β | 2024 | β |
| Historical spread routes of wild walnuts in Central Asia shaped by man-made and nature. | Li X et al. | β | 2024 | β |
| Hybrid speciation driven by multilocus introgression of ecological traits. | Rosser N et al. | β | 2024 | β |
| Identification of Functional Variants Between Tong Sheep and Hu Sheep by Whole-Genome Sequencing Pools of Individuals. | Tang X et al. | β | 2024 | β |
| Identification of genetic loci for seed shattering in Italian ryegrass (Lolium multiflorum Lam.). | Tamura KI et al. | β | 2024 | β |
| Identification of genomic regions controlling spikelet degeneration under FRIZZLE PANICLE (FZP) defect genetic background in rice. | Wang SS et al. | β | 2024 | β |
| Identification of <i>Rmg11</i> in Tetraploid Wheat as a New Blast Resistance Gene with Tolerance to High Temperature. | Islam MT et al. | β | 2024 | β |
| Identification of potential inhibitors for drug-resistant EGFR mutations in non-small cell lung cancer using whole exome sequencing data. | Nagarajan N et al. | β | 2024 | β |
| Identification of QTLs involved in destemming and fruit quality for mechanical harvesting of New Mexico pod-type green chile. | Ortega F et al. | β | 2024 | β |
| Identification of skewed X chromosome inactivation using exome and transcriptome sequencing in patients with suspected rare genetic disease. | Fadra N et al. | β | 2024 | β |
| Identification of the causal mutation in early heading mutant of bread wheat (<i>Triticum aestivum</i> L.) using MutMap approach. | Komura S et al. | β | 2024 | β |
| Identification of tumor rejection antigens and the immunologic landscape of medulloblastoma. | Yang C et al. | β | 2024 | β |
| IDeRare: a lightweight and extensible open-source phenotype and exome analysis pipeline for germline rare disease diagnosis. | Harsono IW et al. | β | 2024 | β |
| Immune Checkpoint Inhibitor Therapy and Associations with Clonal Hematopoiesis. | Singh A et al. | β | 2024 | β |
| Impact of feralization on evolutionary trajectories in the genomes of feral cat island populations. | Nieto-BlΓ‘zquez ME et al. | β | 2024 | β |
| Impact of high-risk EBV strains on nasopharyngeal carcinoma gene expression. | Lim CY et al. | β | 2024 | β |
| Impact of Long-Term Pyriproxyfen Exposure on the Genetic Structure and Diversity of <i>Aedes aegypti</i> and <i>Aedes albopictus</i> in Manaus, Amazonas, Brazil. | Leles LFO et al. | β | 2024 | β |
| Impact of Vaccination on Intra-Host Genetic Diversity of Patients Infected with SARS-CoV-2 Gamma Lineage. | Marques BC et al. | β | 2024 | β |
| Impact of whole-genome duplications on structural variant evolution in Cochlearia. | HΓ€mΓ€lΓ€ T et al. | β | 2024 | β |
| Impaired signaling pathways on Berardinelli-Seip congenital lipodystrophy macrophages during Leishmania infantum infection. | Nogueira VB et al. | β | 2024 | β |
| Impairment in a member of AP2/ERF and F-box family protein enhances complete panicle exsertion in rice. | Ballichatla S et al. | β | 2024 | β |
| Imputation strategies for low-coverage whole-genome sequencing data and their effects on genomic prediction and genome-wide association studies in pigs. | Wang XQ et al. | β | 2024 | β |
| Inferring allele-specific copy number aberrations and tumor phylogeography from spatially resolved transcriptomics. | Ma C et al. | β | 2024 | β |
| Influenza A genomic diversity during human infections underscores the strength of genetic drift and the existence of tight transmission bottlenecks. | Martin MA et al. | β | 2024 | β |
| Insecticide resistance and population structure of the invasive malaria vector, Anopheles stephensi, from Fiq, Ethiopia. | Samake JN et al. | β | 2024 | β |
| Insights into Adaption and Growth Evolution: Genome-Wide Copy Number Variation Analysis in Chinese Hainan Yellow Cattle Using Whole-Genome Re-Sequencing Data. | Zhong Z et al. | β | 2024 | β |
| Insights into genomic sequence diversity of the SAG surface antigen superfamily in geographically diverse Eimeria tenella isolates. | Kiang AL et al. | β | 2024 | β |
| Integrative genomics identifies SHPRH as a tumor suppressor gene in lung adenocarcinoma that regulates DNA damage response. | Nagelberg AL et al. | β | 2024 | β |
| Integrative regulation of hLMR1 by dietary and genetic factors in nonalcoholic fatty liver disease and hyperlipidemia. | Jaso-Vera ME et al. | β | 2024 | β |
| Interpretation of SNP combination effects on schizophrenia etiology based on stepwise deep learning with multi-precision data. | Jo Y et al. | β | 2024 | β |
| In vitro phenotypic characterisation of two genotype I African swine fever viruses with genomic deletion isolated from Sardinian wild boars. | Franzoni G et al. | β | 2024 | β |
| Landscape genomics reveals regions associated with adaptive phenotypic and genetic variation in Ethiopian indigenous chickens. | Kebede FG et al. | β | 2024 | β |
| Leaf gene expression trajectories during the growing season are consistent between sites and years in American beech. | Sezen UU et al. | β | 2024 | β |
| Linkage mapping of root shape traits in two carrot populations. | Vega A et al. | β | 2024 | β |
| Long genetic and social isolation in Neanderthals before their extinction. | Slimak L et al. | β | 2024 | β |
| Longitudinal molecular profiling elucidates immunometabolism dynamics in breast cancer. | Wang K et al. | β | 2024 | β |
| Long-range linkage disequilibrium events on the genome of dromedary camels as a signal of epistatic and directional positive selection. | Bahbahani H | β | 2024 | β |
| Long-term stability of acquired drug resistance and resistance associated mutations in the fungal pathogen <i>Nakaseomyces glabratus</i> (<i>Candida glabrata</i>). | Ksiezopolska E et al. | β | 2024 | β |
| <i>Brd4::Nutm1</i> fusion gene initiates NUT carcinoma in vivo. | Zheng D et al. | β | 2024 | β |
| <i>Hydra</i> has mammal-like mutation rates facilitating fast adaptation despite its nonaging phenotype. | Sahm A et al. | β | 2024 | β |
| <i>In vitro</i> development of resistance against antipseudomonal agents: comparison of novel Ξ²-lactam/Ξ²-lactamase inhibitor combinations and other Ξ²-lactam agents. | Castanheira M et al. | β | 2024 | β |
| Mapping seasonal migration in a songbird hybrid zone -- heritability, genetic correlations, and genomic patterns linked to speciation. | Justen HC et al. | β | 2024 | β |
| Measuring X-Chromosome inactivation skew for X-linked diseases with adaptive nanopore sequencing. | Gocuk SA et al. | β | 2024 | β |
| Mismatch between lab-generated and field-evolved resistance to transgenic Bt crops in <i>Helicoverpa zea</i>. | Legan AW et al. | β | 2024 | β |
| Mitochondrial and Nuclear DNA Variants in Amyotrophic Lateral Sclerosis: Enrichment in the Mitochondrial Control Region and Sirtuin Pathway Genes in Spinal Cord Tissue. | Cox SN et al. | β | 2024 | β |
| Mitochondrial genome variants associated with amyotrophic lateral sclerosis and their haplogroup distribution. | Briones MRS et al. | β | 2024 | β |
| Mitonuclear interactions impact aerobic metabolism in hybrids and may explain mitonuclear discordance in young, naturally hybridizing bird lineages. | McDiarmid CS et al. | β | 2024 | β |
| Modeling Heartland virus disease in mice and therapeutic intervention with 4'-fluorouridine. | Westover JB et al. | β | 2024 | β |
| Molecular Mechanisms of Temperature Tolerance Plasticity in an Arthropod. | Aagaard A et al. | β | 2024 | β |
| Molecular patterns of resistance to immune checkpoint blockade in melanoma. | Lauss M et al. | β | 2024 | β |
| Molecular Profiling Defines Three Subtypes of Synovial Sarcoma. | Chen Y et al. | β | 2024 | β |
| Multi-dimensional cell-free DNA-based liquid biopsy for sensitive early detection of gastric cancer. | Yu P et al. | β | 2024 | β |
| Multi-locus investigation of Anopheles-mediated selective pressure on Plasmodium falciparum in Africa. | Gunarathna I et al. | β | 2024 | β |
| Multiple Human Population Movements and Cultural Dispersal Events Shaped the Landscape of Chinese Paternal Heritage. | Wang M et al. | β | 2024 | β |
| Multiple introductions of divergent lineages and admixture conferred the high invasiveness in a widespread weed (<i>Hypochaeris radicata</i>). | Lee SR et al. | β | 2024 | β |
| Mutation profiling through whole genome sequencing of electron beam-induced black gram (<i>Vigna mungo</i> L. Hepper) mutant. | Habde SV et al. | β | 2024 | β |
| Natural variation in infection specificity of Caenorhabditis briggsae isolates by two RNA viruses. | Alkan C et al. | β | 2024 | β |
| Natural variation in yeast reveals multiple paths for acquiring higher stress resistance. | Scholes AN et al. | β | 2024 | β |
| Near-complete genome assembly of tomato (<i>Solanum lycopersicum</i>) cultivar Micro-Tom. | Shirasawa K et al. | β | 2024 | β |
| Neotelomeres and telomere-spanning chromosomal arm fusions in cancer genomes revealed by long-read sequencing. | Tan KT et al. | β | 2024 | β |
| Neq2X7: a multi-purpose and open-source fusion DNA polymerase for advanced DNA engineering and diagnostics PCR. | HernΓ‘ndez-RollΓ‘n C et al. | β | 2024 | β |
| Network of large pedigrees reveals social practices of Avar communities. | Gnecchi-Ruscone GA et al. | β | 2024 | β |
| Next-generation phenotyping integrated in a national framework for patients with ultrarare disorders improves genetic diagnostics and yields new molecular findings. | Schmidt A et al. | β | 2024 | β |
| Next-generation phylogeography reveals unanticipated population history and climate and human impacts on the endangered floodplain bitterling (Acheilognathus longipinnis). | Onuki K et al. | β | 2024 | β |
| No evidence that a transmissible cancer has shifted from emergence to endemism in Tasmanian devils. | Stammnitz MR et al. | β | 2024 | β |
| Non-cell-autonomous signaling associated with barley ALOG1 specifies spikelet meristem determinacy. | Jiang G et al. | β | 2024 | β |
| Observing character displacement from process to pattern in a novel vertebrate community. | Stroud JT et al. | β | 2024 | β |
| On the evolution and genetic diversity of the bread wheat D genome. | Wang Z et al. | β | 2024 | β |
| Optimization data for an ARTIC-/Illumina-based whole-genome sequencing protocol and pipeline for SARS-CoV-2 analysis. | Bundschuh C et al. | β | 2024 | β |
| Oral microbial diversity in 18th century African individuals from South Carolina. | Fleskes RE et al. | β | 2024 | β |
| Origin and diversity of the wild cottons (Gossypium hirsutum) of Mound Key, Florida. | Ning W et al. | β | 2024 | β |
| otb: an automated HiC/HiFi pipeline assembles the Prosapia bicincta Genome. | Molik DC et al. | β | 2024 | β |
| Oxford Nanopore's 2024 sequencing technology for <i>Listeria monocytogenes</i> outbreak detection and source attribution: progress and clone-specific challenges. | Biggel M et al. | β | 2024 | β |
| Pan-azole- and multi-fungicide-resistant <i>Aspergillus fumigatus</i> is widespread in the United States. | Celia-Sanchez BN et al. | β | 2024 | β |
| Pan-cancer discovery of somatic mutations from RNA sequencing data. | Tang G et al. | β | 2024 | β |
| Phenome-wide association study in 25,639 pregnant Chinese women reveals loci associated with maternal comorbidities and child health. | Guo J et al. | β | 2024 | β |
| Phenotypic and genetic characterization of unexplored, potential cattle population of Madhya Pradesh. | Sivalingam J et al. | β | 2024 | β |
| Phylogenetic and Molecular Characteristics of Wild Bird-Origin Avian Influenza Viruses Circulating in Poland in 2018-2022: Reassortment, Multiple Introductions, and Wild Bird-Poultry Epidemiological Links. | Dziadek K et al. | β | 2024 | β |
| Plant growth Enhancement in Colchicine-Treated Tomato Seeds without Polyploidy Induction. | Obando-GonzΓ‘lez RI et al. | β | 2024 | β |
| Polyploid genome assembly of <i>Cardamine chenopodiifolia</i>. | Emonet A et al. | β | 2024 | β |
| Population comparative genomics discovers gene gain and loss during grapevine domestication. | Long Q et al. | β | 2024 | β |
| Population genetics and phylogeographic history of the insular lizard <i>Podarcis lilfordi</i> (Gunther, 1874) from the Balearic Islands based on genome-wide polymorphic data. | Otalora K et al. | β | 2024 | β |
| Population Genomic History of the Endangered Anatolian and Cyprian Mouflons in Relation to Worldwide Wild, Feral, and Domestic Sheep Lineages. | AtaΔ G et al. | β | 2024 | β |
| Population genomics of seal lice provides insights into the postglacial history of northern European seals. | Sromek L et al. | β | 2024 | β |
| Position-dependent function of human sequence-specific transcription factors. | Duttke SH et al. | β | 2024 | β |
| Predicted genetic burden and frequency of phenotype-associated variants in the horse. | Durward-Akhurst SA et al. | β | 2024 | β |
| Prediction of the 3D cancer genome from whole-genome sequencing using InfoHiC. | Lee Y et al. | β | 2024 | β |
| Predominance of multidrug-resistant Salmonella Typhi genotype 4.3.1 with low-level ciprofloxacin resistance in Zanzibar. | Onken A et al. | β | 2024 | β |
| Preliminary investigation of potential links between pigmentation variants and opioid analgesic effectiveness in horses during cerebrospinal fluid centesis. | Bacon EK et al. | β | 2024 | β |
| Prevalent Fast Evolution of Genes Involved in Heterochromatin Functions. | Lin L et al. | β | 2024 | β |
| Probiotic neoantigen delivery vectors for precision cancer immunotherapy. | Redenti A et al. | β | 2024 | β |
| Programmed cell death regulator BAP2 is required for IRE1-mediated unfolded protein response in Arabidopsis. | Pastor-Cantizano N et al. | β | 2024 | β |
| Propagation path of a flowering cherry (Cerasus Γ yedoensis) cultivar 'Somei-Yoshino' traced by somatic mutations. | Shirasawa K et al. | β | 2024 | β |
| Protocol for preparing Drosophila genomic DNA to create chromosome-level de novo genome assemblies. | Sperling AL et al. | β | 2024 | β |
| QTL mapping and BSR-seq revealed loci and candidate genes associated with the sporadic multifoliolate phenotype in soybean (Glycine max). | Wang Z et al. | β | 2024 | β |
| QTL mapping and candidate gene analysis reveal two major loci regulating green leaf color in non-heading Chinese cabbage. | Bai A et al. | β | 2024 | β |
| QTL mapping of downy mildew resistance in foxtail millet by SLAFβseq and BSR-seq analysis. | Liu X et al. | β | 2024 | β |
| Rare Germline Variants in DNA Repair Genes Detected in <i>BRCA</i>-Negative Finnish Patients with Early-Onset Breast Cancer. | Kurkilahti V et al. | β | 2024 | β |
| Rare variation in non-coding regions with evolutionary signatures contributes to autism spectrum disorder risk. | Shin T et al. | β | 2024 | β |
| Reciprocal regulation of enterococcal cephalosporin resistance by products of the autoregulated yvcJ-glmR-yvcL operon enhances fitness during cephalosporin exposure. | DjoriΔ D et al. | β | 2024 | β |
| Recombination, admixture and genome instability shape the genomic landscape of Saccharomyces cerevisiae derived from spontaneous grape ferments. | Ward CM et al. | β | 2024 | β |
| Recommendations for Uniform Variant Calling of SARS-CoV-2 Genome Sequence across Bioinformatic Workflows. | Connor R et al. | β | 2024 | β |
| Recurrent Duplication and Diversification of a Vital DNA Repair Gene Family Across Drosophila. | Brand CL et al. | β | 2024 | β |
| Reduction of bitter taste receptor gene family in folivorous colobine primates relative to omnivorous cercopithecine primates. | Hou M et al. | β | 2024 | β |
| Reference Genome Choice and Filtering Thresholds Jointly Influence Phylogenomic Analyses. | Rick JA et al. | β | 2024 | β |
| Regional diversity and leaf microbiome interactions of the fungal maize pathogen Exserohilum turcicum in Switzerland: A metagenomic analysis. | Vidal-Villarejo M et al. | β | 2024 | β |
| Repeat-induced point mutations driving Parastagonospora nodorum genomic diversity are balanced by selection against non-synonymous mutations. | Jones DAB et al. | β | 2024 | β |
| Resequencing of reindeer genomes provides clues to their docile habits. | Wu B et al. | β | 2024 | β |
| Resilience to periodic disturbances and the long-term genetic stability in Acropora coral. | Thomas L et al. | β | 2024 | β |
| Resolving complex duplication variants in autism spectrum disorder using long-read genome sequencing. | Eisfeldt J et al. | β | 2024 | β |
| Retention of ES cell-derived 129S genome drives NLRP1 hypersensitivity and transcriptional deregulation in Nlrp3<sup>tm1Flv</sup> mice. | Weiss FD et al. | β | 2024 | β |
| Revealing Differential RNA Editing Specificity of Human ADAR1 and ADAR2 in <i>Schizosaccharomyces pombe</i>. | Zhang N et al. | β | 2024 | β |
| Revealing genes related teat number traits via genetic variation in Yorkshire pigs based on whole-genome sequencing. | Wei J et al. | β | 2024 | β |
| Revealing the Demographic History of the European Nightjar (<i>Caprimulgus europaeus</i>). | Day G et al. | β | 2024 | β |
| RNA Editing Signatures Powered by Artificial Intelligence: A New Frontier in Differentiating Schizophrenia, Bipolar, and Schizoaffective Disorders. | Checa-Robles FJ et al. | β | 2024 | β |
| SARS-CoV-2 surveillance in captive animals at the belo horizonte zoo, Minas Gerais, Brazil. | Castillo AP et al. | β | 2024 | β |
| Seamless, rapid, and accurate analyses of outbreak genomic data using split <i>k</i>-mer analysis. | Derelle R et al. | β | 2024 | β |
| Selection signature analysis reveals genes associated with tail phenotype in sheep. | Qi Y et al. | β | 2024 | β |
| Sequence-Based Machine Learning Reveals 3D Genome Differences between Bonobos and Chimpanzees. | Brand CM et al. | β | 2024 | β |
| Sequence signatures within the genome of SARS-CoV-2 can be used to predict host source. | Rudar J et al. | β | 2024 | β |
| Sequencing of Kaposi's Sarcoma Herpesvirus (KSHV) genomes from persons of diverse ethnicities and provenances with KSHV-associated diseases demonstrate multiple infections, novel polymorphisms, and low intra-host variance. | Marshall VA et al. | β | 2024 | β |
| SeqVerify: An accessible analysis tool for cell line genomic integrity, contamination, and gene editing outcomes. | Pierson Smela M et al. | β | 2024 | β |
| Severe Bottleneck Impacted the Genomic Structure of Egg-Eating Cichlids in Lake Victoria. | Imamoto M et al. | β | 2024 | β |
| Sex chromosome turnover in hybridizing stickleback lineages. | Yi X et al. | β | 2024 | β |
| Shared xerophytic genes and their re-use in local adaptation to aridity in the desert plant Gymnocarpos przewalskii. | Fu R et al. | β | 2024 | β |
| Simulating Genetic Mixing in Strongly Structured Populations of the Threatened Southern Brown Bandicoot (<i>Isoodon obesulus</i>). | Black JG et al. | β | 2024 | β |
| Single-cell RNA-seq reveals keratinocyte and fibroblast heterogeneity and their crosstalk via epithelial-mesenchymal transition in psoriasis. | Guo D et al. | β | 2024 | β |
| Single nucleotide polymorphisms conferring susceptibility to leukemia and oral mucositis: a multi-center pilot study of patients prior to conditioning therapy for hematopoietic cell transplant. | Mougeot JC et al. | β | 2024 | β |
| Site-directed genotype screening for elimination of antinutritional saponins in quinoa seeds identifies TSARL1 as a master controller of saponin biosynthesis selectively in seeds. | Trinh MDL et al. | β | 2024 | β |
| SLRfinder: A method to detect candidate sex-linked regions with linkage disequilibrium clustering. | Yi X et al. | β | 2024 | β |
| Somatic mutation rates scale with time not growth rate in long-lived tropical trees. | Satake A et al. | β | 2024 | β |
| Somatic mutations associate with clonal expansion of CD8<sup>+</sup> T cells. | Lundgren S et al. | β | 2024 | β |
| STAG2 mutations reshape the cohesin-structured spatial chromatin architecture to drive gene regulation in acute myeloid leukemia. | Fischer A et al. | β | 2024 | β |
| Strongly deleterious mutations influence reproductive output and longevity in an endangered population. | Hasselgren M et al. | β | 2024 | β |
| Structural variation in the pangenome of wild and domesticated barley. | Jayakodi M et al. | β | 2024 | β |
| Substygophily in Dinaric Karst: A Model Case of Locally Endemic Minnows <i>Phoxinellus</i> (Leuciscinae). | PalandaΔiΔ A et al. | β | 2024 | β |
| Suppression of inositol pyrophosphate toxicosis and hyper-repression of the fission yeast <i>PHO</i> regulon by loss-of-function mutations in chromatin remodelers Snf22 and Sol1. | Schwer B et al. | β | 2024 | β |
| SuPreMo: a computational tool for streamlining in silico perturbation using sequence-based predictive models. | Gjoni K et al. | β | 2024 | β |
| Systematic review and feasibility study on pre-analytical factors and genomic analyses on archival formalin-fixed paraffin-embedded breast cancer tissue. | Salgkamis D et al. | β | 2024 | β |
| Temporal dynamics of faster neo-Z evolution in butterflies. | HΓΆΓΆk L et al. | β | 2024 | β |
| Temporal dynamics of woolly mammoth genome erosion prior to extinction. | Dehasque M et al. | β | 2024 | β |
| The auxin efflux carrier PIN1a regulates vascular patterning in cereal roots. | Fusi R et al. | β | 2024 | β |
| The chromosome-scale reference genome for the pinfish (Lagodon rhomboides) provides insights into their evolutionary and demographic history. | Eaton KM et al. | β | 2024 | β |
| The complete mitochondrial genome of <i>Aglaia odorata</i>, insights into its genomic structure and RNA editing sites. | Hao Z et al. | β | 2024 | β |
| The complete mitochondrial genome of <i>Pontederia crassipes</i>: using HiFi reads to investigate genome recombination and gene transfer from chloroplast genome. | Hao Z et al. | β | 2024 | β |
| The genetics of Ug99 stem rust resistance in spring wheat variety 'Linkert'. | Edae EA et al. | β | 2024 | β |
| The Impact of Cell-Intrinsic STAT6 Protein on Donor T Cell-Mediated Graft-Versus-Tumor Effect. | Guan X et al. | β | 2024 | β |
| The kinase ATR controls meiotic crossover distribution at the genome scale in Arabidopsis. | Zhu L et al. | β | 2024 | β |
| The near-complete genome assembly of hexaploid wild oat reveals its genome evolution and divergence with cultivated oats. | He Q et al. | β | 2024 | β |
| The Population History of Domestic Sheep Revealed by Paleogenomes. | Kaptan D et al. | β | 2024 | β |
| The Primula edelbergii S-locus is an example of a jumping supergene. | Potente G et al. | β | 2024 | β |
| The Sensory Shark: High-quality Morphological, Genomic and Transcriptomic Data for the Small-spotted Catshark Scyliorhinus Canicula Reveal the Molecular Bases of Sensory Organ Evolution in Jawed Vertebrates. | Mayeur H et al. | β | 2024 | β |
| Towards Reliable Detection of Introgression in the Presence of Among-Species Rate Variation. | Koppetsch T et al. | β | 2024 | β |
| Tracing ALS Degeneration: Insights from Spinal Cord and Cortex Transcriptomes. | Sneha NP et al. | β | 2024 | β |
| Transposon-mediated genic rearrangements underlie variation in small RNA pathways. | Zhang G et al. | β | 2024 | β |
| Trio-based exome sequencing and high-resolution HLA typing in families of patients with autoimmune adrenal insufficiency and autoimmune polyglandular syndrome. | Buianova A et al. | β | 2024 | β |
| Twelve newly assembled jasmine chloroplast genomes: unveiling genomic diversity, phylogenetic relationships and evolutionary patterns among Oleaceae and Jasminum species. | Xu X et al. | β | 2024 | β |
| Two novel genomes of fireflies with different degrees of sexual dimorphism reveal insights into sex-biased gene expression and dosage compensation. | CatalΓ‘n A et al. | β | 2024 | β |
| txci-ATAC-seq: a massive-scale single-cell technique to profile chromatin accessibility. | Zhang H et al. | β | 2024 | β |
| Tyrp1 is the mendelian determinant of the Axolotl (Ambystoma mexicanum) copper mutant. | Cecil RF et al. | β | 2024 | β |
| Uncovering ghost introgression through genomic analysis of a distinct eastern Asian hickory species. | Zhang WP et al. | β | 2024 | β |
| Unravelling the genetic basis and regulation networks related to fibre quality improvement using chromosome segment substitution lines in cotton. | Qi G et al. | β | 2024 | β |
| Unveiling a potential threat to forest ecosystems: molecular diagnosis of <i>Alliaria petiolata</i>, a newly introduced alien plant in Korea. | Choi TY et al. | β | 2024 | β |
| Urbanization-associated range expansion genetically homogenizes a butterfly species. | Blattner LA et al. | β | 2024 | β |
| Usefulness of multigene liquid biopsy of bile for identifying driver genes of biliary duct cancers. | Ito S et al. | β | 2024 | β |
| Using bioinformatics to investigate functional diversity: a case study of MHC diversity in koalas. | Silver LW et al. | β | 2024 | β |
| Utility analyses of AVITI sequencing chemistry. | Liu S et al. | β | 2024 | β |
| Utilizing non-invasive prenatal test sequencing data for human genetic investigation. | Liu S et al. | β | 2024 | β |
| Vaccine Take of RV3-BB Rotavirus Vaccine Observed in Indonesian Infants Regardless of HBGA Status. | Donato CM et al. | β | 2024 | β |
| Variant load of mitochondrial DNA in single human mesenchymal stem cells. | Hipps D et al. | β | 2024 | β |
| VCAT: an integrated variant function annotation tools. | Huang B et al. | β | 2024 | β |
| VOE: automated analysis of variant epitopes of SARS-CoV-2 for the development of diagnostic tests or vaccines for COVID-19. | Lee D et al. | β | 2024 | β |
| Whole-Exome Sequencing Improves Understanding of Inherited Retinal Dystrophies in Korean Patients. | Park Y et al. | β | 2024 | β |
| Whole Genome Analysis Reveals Evolutionary History and Introgression Events in Bale Monkeys. | Seshadri L et al. | β | 2024 | β |
| Whole-genome analysis reveals phylogenetic and demographic history of Eurasian perch. | Lichman V et al. | β | 2024 | β |
| Whole-genome resequencing and RNA-seq analysis implicates GPR75 as a potential genetic basis related to retarded growth in South China carp (Cyprinus carpio rubrofuscus). | Zhong Z et al. | β | 2024 | β |
| Whole-genome resequencing of Chinese indigenous sheep provides insight into the genetic basis underlying climate adaptation. | Jin M et al. | β | 2024 | β |
| Whole genome sequence analysis of turkey orthoreovirus isolates reveals a strong viral host-specificity and naturally occurring co-infections in commercial turkeys. | Alvarez Narvaez S et al. | β | 2024 | β |
| Whole-Genome Sequences of 13 Chinese Indigenous Pinewood Nematodes, <i>Bursaphelenchus xylophilus</i>. | Dong B et al. | β | 2024 | β |
| Whole genome sequencing analysis of Mycobacterium tuberculosis reveals circulating strain types and drug-resistance mutations in the Philippines. | Wang L et al. | β | 2024 | β |
| Whole Genomes Reveal Evolutionary Relationships and Mechanisms Underlying Gene-Tree Discordance in Neodiprion Sawflies. | Herrig DK et al. | β | 2024 | β |
| Within-host influenza viral diversity in the pediatric population as a function of age, vaccine, and health status. | Sobel Leonard A et al. | β | 2024 | β |
| ZW sex chromosome structure in Amborella trichopoda. | Carey SB et al. | β | 2024 | β |