Neurobiology of the Caenorhabditis elegans genome.
- Authors
- Bargmann, C I
- Year
- 1998
- Journal
- Science (New York, N.Y.)
- PMID
- 9851919
- DOI
- 10.1126/science.282.5396.2028
Neurotransmitter receptors, neurotransmitter synthesis and release pathways, and heterotrimeric GTP-binding protein (G protein)-coupled second messenger pathways are highly conserved between Caenorhabditis elegans and mammals, but gap junctions and chemosensory receptors have independent origins in vertebrates and nematodes. Most ion channels are similar to vertebrate channels but there are no predicted voltage-activated sodium channels. The C. elegans genome encodes at least 80 potassium channels, 90 neurotransmitter-gated ion channels, 50 peptide receptors, and up to 1000 orphan receptors that may be chemoreceptors. For many gene families, C. elegans has both conventional members and divergent outliers with weak homology to known genes; these outliers may provide insights into previously unknown functions of conserved protein families.
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| Addiction research in a simple animal model: the nematode Caenorhabditis elegans. | Schafer WR | β | 2004 | β |
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| A new gene-finding tool: using the Caenorhabditis elegans operons for identifying functional partner proteins in human cells. | EichmΓΌller S et al. | β | 2004 | β |
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| Using C. elegans to screen for targets of ethanol and behavior-altering drugs. | Davies AG et al. | β | 2004 | β |
| 2P domain K+ channels: novel pharmacological targets for volatile general anesthetics. | Patel AJ et al. | β | 2003 | β |
| Agonist-induced formation of opioid receptor-G protein-coupled receptor kinase (GRK)-G beta gamma complex on membrane is required for GRK2 function in vivo. | Li J et al. | β | 2003 | β |
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| Bridging the gap between genes and behavior: recent advances in the electrophysiological analysis of neural function in Caenorhabditis elegans. | Francis MM et al. | β | 2003 | β |
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| Comparison of the canine and human olfactory receptor gene repertoires. | Quignon P et al. | β | 2003 | β |
| Critical residues of the Caenorhabditis elegans unc-2 voltage-gated calcium channel that affect behavioral and physiological properties. | Mathews EA et al. | β | 2003 | β |
| Differential activation of "social" and "solitary" variants of the Caenorhabditis elegans G protein-coupled receptor NPR-1 by its cognate ligand AF9. | Kubiak TM et al. | β | 2003 | β |
| Dissection of K+ currents in Caenorhabditis elegans muscle cells by genetics and RNA interference. | Santi CM et al. | β | 2003 | β |
| Dying for a cause: invertebrate genetics takes on human neurodegeneration. | Driscoll M et al. | β | 2003 | β |
| From genes to integrative physiology: ion channel and transporter biology in Caenorhabditis elegans. | Strange K | β | 2003 | β |
| Functional annotation of the putative orphan Caenorhabditis elegans G-protein-coupled receptor C10C6.2 as a FLP15 peptide receptor. | Kubiak TM et al. | β | 2003 | β |
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| In vivo imaging of C. elegans mechanosensory neurons demonstrates a specific role for the MEC-4 channel in the process of gentle touch sensation. | Suzuki H et al. | β | 2003 | β |
| LIM homeobox gene-dependent expression of biogenic amine receptors in restricted regions of the C. elegans nervous system. | Tsalik EL et al. | β | 2003 | β |
| mGluR1, but not mGluR5, mediates depolarization of spinal cord neurons by blocking a leak current. | Kettunen P et al. | β | 2003 | β |
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| Presence of the delta-MSH sequence in a proopiomelanocortin cDNA cloned from the pituitary of the galeoid shark, Heterodontus portusjacksoni. | Dores RM et al. | β | 2003 | β |
| Presynaptic N-type calcium channels regulate synaptic growth. | Rieckhof GE et al. | β | 2003 | β |
| Progress in methodology. Improved reporter gene assays used to identify ligands acting on orphan seven-transmembrane receptors. | Kotarsky K et al. | β | 2003 | β |
| Reliability measures for membrane protein topology prediction algorithms. | MelΓ©n K et al. | β | 2003 | β |
| Seeing touch: moving closer to the worm mechanotransduction complex. | Hill JK et al. | β | 2003 | β |
| Selection at a gamma-aminobutyric acid receptor gene in Haemonchus contortus resistant to avermectins/milbemycins. | Blackhall WJ et al. | β | 2003 | β |
| Sequence-function analysis of the K+-selective family of ion channels using a comprehensive alignment and the KcsA channel structure. | Shealy RT et al. | β | 2003 | β |
| sup-9, sup-10, and unc-93 may encode components of a two-pore K+ channel that coordinates muscle contraction in Caenorhabditis elegans. | de la Cruz IP et al. | β | 2003 | β |
| The Caenorhabditis elegans dopaminergic system: opportunities for insights into dopamine transport and neurodegeneration. | Nass R et al. | β | 2003 | β |
| The EGL-21 carboxypeptidase E facilitates acetylcholine release at Caenorhabditis elegans neuromuscular junctions. | Jacob TC et al. | β | 2003 | β |
| The evolutionarily triumphant G-protein-coupled receptor. | Perez DM | β | 2003 | β |
| The sodium-activated potassium channel is encoded by a member of the Slo gene family. | Yuan A et al. | β | 2003 | β |
| 4-aminopyridine- and dendrotoxin-sensitive potassium channels influence excitability of vagal mechano-sensitive endings in guinea-pig oesophagus. | Zagorodnyuk VP et al. | β | 2002 | β |
| A comparative study of odorant binding protein genes: differential expression of the PBP1-GOBP2 gene cluster in Manduca sexta (Lepidoptera) and the organization of OBP genes in Drosophila melanogaster (Diptera). | Vogt RG et al. | β | 2002 | β |
| Analyzing defects in the Caenorhabditis elegans nervous system using organismal and cell biological approaches. | Guziewicz M et al. | β | 2002 | β |
| Analyzing the evolution of the opioid/orphanin gene family. | Dores RM et al. | β | 2002 | β |
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| A question of size: the eukaryotic proteome and the problems in defining it. | Harrison PM et al. | β | 2002 | β |
| Characterisation of guanylyl cyclase genes in the soybean cyst nematode, Heterodera glycines. | Yan Y et al. | β | 2002 | β |
| Characterization of K(+) currents using an in situ patch clamp technique in body wall muscle cells from Caenorhabditis elegans. | Jospin M et al. | β | 2002 | β |
| Combinatorial expression of TRPV channel proteins defines their sensory functions and subcellular localization in C. elegans neurons. | Tobin DM et al. | β | 2002 | β |
| Downstream targets of let-60 Ras in Caenorhabditis elegans. | Romagnolo B et al. | β | 2002 | β |
| Expression pattern in the antennae of a newly isolated lepidopteran Gq protein alpha subunit cDNA. | Jacquin-Joly E et al. | β | 2002 | β |
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| Functional screening of G protein-coupled receptors by measuring intracellular calcium with a fluorescence microplate reader. | Kassack MU et al. | β | 2002 | β |
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| G protein-coupled receptors: dominant players in cell-cell communication. | Bockaert J et al. | β | 2002 | β |
| Identification of a dopamine receptor from Caenorhabditis elegans. | Suo S et al. | β | 2002 | β |
| Identification of G protein-coupled receptor genes from the human genome sequence. | Takeda S et al. | β | 2002 | β |
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| In vivo genetics of anaesthetic action. | Nash HA | β | 2002 | β |
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| Localization of the tandem pore domain K+ channel KCNK5 (TASK-2) in the rat central nervous system. | Gabriel A et al. | β | 2002 | β |
| Mammalian chemosensory receptors. | Sullivan SL | β | 2002 | β |
| Metabotropic glutamate receptors provide intrinsic modulation of the lamprey locomotor network. | El Manira A et al. | β | 2002 | β |
| Neuropeptides in the nervous system of Drosophila and other insects: multiple roles as neuromodulators and neurohormones. | NΓ€ssel DR | β | 2002 | β |
| Novel animal-health drug targets from ligand-gated chloride channels. | Raymond V et al. | β | 2002 | β |
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| Paraherquamide and 2-deoxy-paraherquamide distinguish cholinergic receptor subtypes in Ascaris muscle. | Robertson AP et al. | β | 2002 | β |
| Structural characterization of the human proteome. | MΓΌller A et al. | β | 2002 | β |
| Studying genomes through the aeons: protein families, pseudogenes and proteome evolution. | Harrison PM et al. | β | 2002 | β |
| The C. elegans ric-3 gene is required for maturation of nicotinic acetylcholine receptors. | Halevi S et al. | β | 2002 | β |
| The L-type voltage-dependent Ca2+ channel EGL-19 controls body wall muscle function in Caenorhabditis elegans. | Jospin M et al. | β | 2002 | β |
| The synaptic vesicle cycle: exocytosis and endocytosis in Drosophila and C. elegans. | Richmond JE et al. | β | 2002 | β |
| Why are olfactory systems of different animals so similar? | Eisthen HL | β | 2002 | β |
| A cGMP-dependent protein kinase is implicated in wild-type motility in C. elegans. | Stansberry J et al. | β | 2001 | β |
| A conserved mechanism of synaptogyrin localization. | Zhao H et al. | β | 2001 | β |
| Allosteric mechanisms in normal and pathological nicotinic acetylcholine receptors. | Changeux J et al. | β | 2001 | β |
| A putative tachykinin receptor in the cockroach brain: molecular cloning and analysis of expression by means of antisera to portions of the receptor protein. | Johard HA et al. | β | 2001 | β |
| Beta-adrenergic signaling in the heart: dual coupling of the beta2-adrenergic receptor to G(s) and G(i) proteins. | Xiao RP | β | 2001 | β |
| C. elegans: a novel pharmacogenetic model to study Parkinson's disease. | Nass R et al. | β | 2001 | β |
| Cellular and subcellular localization, N-terminal acylation, and calcium binding of Caenorhabditis elegans protein phosphatase with EF-hands. | Ramulu P et al. | β | 2001 | β |
| cGMP enhances the sonic hedgehog response in neural plate cells. | Robertson CP et al. | β | 2001 | β |
| Characterization of the deg-3/des-2 receptor: a nicotinic acetylcholine receptor that mutates to cause neuronal degeneration. | Yassin L et al. | β | 2001 | β |
| Chemotaxis of the nematode Caenorhabditis elegans toward cycloheximide and quinine hydrochloride. | Tajima T et al. | β | 2001 | β |
| Cloning of a novel biogenic amine receptor-like G protein-coupled receptor expressed in human brain. | Cikos S et al. | β | 2001 | β |
| DAF-7/TGF-beta expression required for the normal larval development in C. elegans is controlled by a presumed guanylyl cyclase DAF-11. | Murakami M et al. | β | 2001 | β |
| Distribution analysis of human two pore domain potassium channels in tissues of the central nervous system and periphery. | Medhurst AD et al. | β | 2001 | β |
| DLG-1 is a MAGUK similar to SAP97 and is required for adherens junction formation. | Firestein BL et al. | β | 2001 | β |
| Evolution tunes the excitability of individual neurons. | Salkoff L et al. | β | 2001 | β |
| Expression of a CIC chloride channel in Caenorhabditis elegans gamma-aminobutyric acid-ergic neurons. | Bianchi L et al. | β | 2001 | β |
| Fruits of human genome project and private venture, and their impact on life science. | Ikekawa A et al. | β | 2001 | β |
| Genetic variations and polymorphisms of G protein-coupled receptors: functional and therapeutic implications. | Rana BK et al. | β | 2001 | β |
| Genomic analysis of synaptotagmin genes. | Craxton M | β | 2001 | β |
| GLC-3: a novel fipronil and BIDN-sensitive, but picrotoxinin-insensitive, L-glutamate-gated chloride channel subunit from Caenorhabditis elegans. | Horoszok L et al. | β | 2001 | β |
| Glutamate receptor channel signatures. | Sprengel R et al. | β | 2001 | β |
| G protein-coupled receptor drug discovery: implications from the crystal structure of rhodopsin. | Ballesteros J et al. | β | 2001 | β |
| GYGD pore motifs in neighbouring potassium channel subunits interact to determine ion selectivity. | Chapman ML et al. | β | 2001 | β |
| Identification of neuropeptide-like protein gene families in Caenorhabditiselegans and other species. | Nathoo AN et al. | β | 2001 | β |
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| Non-synaptic ion channels in insects--basic properties of currents and their modulation in neurons and skeletal muscles. | Wicher D et al. | β | 2001 | β |
| Potassium channels: how genetic studies of epileptic syndromes open paths to new therapeutic targets and drugs. | Cooper EC | β | 2001 | β |
| Regulation of distinct attractive and aversive mechanisms mediating benzaldehyde chemotaxis in Caenorhabditis elegans. | Nuttley WM et al. | β | 2001 | β |
| Regulation of distinct muscle behaviors controls the C. elegans male's copulatory spicules during mating. | Garcia LR et al. | β | 2001 | β |
| Stability of membrane proteins: relevance for the selection of appropriate methods for high-resolution structure determinations. | Rosenbusch JP | β | 2001 | β |
| Taste: independent origins of chemoreception coding systems? | Robertson HM | β | 2001 | β |
| The genetics of aging. | Finch CE et al. | β | 2001 | β |
| The guanine protein coupled receptor rhodopsin is developmentally regulated in the free-living stages of Schistosoma mansoni. | Hoffmann KF et al. | β | 2001 | β |
| The role of cytomegalovirus-encoded homologs of G protein-coupled receptors and chemokines in manipulation of and evasion from the immune system. | Vink C et al. | β | 2001 | β |
| Topology of gap junction networks in C. elegans. | Majewska A et al. | β | 2001 | β |
| What does a worm want with 20,000 genes? | Hodgkin J | β | 2001 | β |
| Acetylcholine receptors and myasthenia. | Lindstrom JM | β | 2000 | β |
| A common muscarinic pathway for diapause recovery in the distantly related nematode species Caenorhabditis elegans and Ancylostoma caninum. | Tissenbaum HA et al. | β | 2000 | β |
| Activation of MAPK cascades by G-protein-coupled receptors: the case of gonadotropin-releasing hormone receptor. | Naor Z et al. | β | 2000 | β |
| A functional role for the two-pore domain potassium channel TASK-1 in cerebellar granule neurons. | Millar JA et al. | β | 2000 | β |
| Analysis of the expressed genome of the lone star tick, Amblyomma americanum (Acari: Ixodidae) using an expressed sequence tag approach. | Hill CA et al. | β | 2000 | β |
| An oxygen-, acid- and anaesthetic-sensitive TASK-like background potassium channel in rat arterial chemoreceptor cells. | Buckler KJ et al. | β | 2000 | β |
| A perspective: the new millennium dawns on a new paradigm for cardiology--molecular genetics. | Roberts R | β | 2000 | β |
| Brain-specific expression of novel G-protein-coupled receptors, with homologies to Xenopus PSP24 and human GPR45. | Kawasawa Y et al. | β | 2000 | β |
| Caenorhabditis elegans senses protons through amphid chemosensory neurons: proton signals elicit avoidance behavior. | Sambongi Y et al. | β | 2000 | β |
| Chemokines and myeloid cell recruitment. | Greaves DR et al. | β | 2000 | β |
| Classification of transmembrane protein families in the Caenorhabditis elegans genome and identification of human orthologs. | Remm M et al. | β | 2000 | β |
| Comparative genomics of the eukaryotes. | Rubin GM et al. | β | 2000 | β |
| Computational analysis of two similar neuropeptides yields distinct conformational ensembles. | Carlacci L et al. | β | 2000 | β |
| Conservation and novelty in the evolution of cell adhesion and extracellular matrix genes. | Hutter H et al. | β | 2000 | β |
| Dauer formation induced by high temperatures in Caenorhabditis elegans. | Ailion M et al. | β | 2000 | β |
| Deus ex genomix. | Miklos GL et al. | β | 2000 | β |
| Drosophila melanogaster G protein-coupled receptors. | Brody T et al. | β | 2000 | β |
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| Food and metabolic signalling defects in a Caenorhabditis elegans serotonin-synthesis mutant. | Sze JY et al. | β | 2000 | β |
| Functional genomic analysis of C. elegans chromosome I by systematic RNA interference. | Fraser AG et al. | β | 2000 | β |
| Future opportunities for life science programs in space. | Yokota H et al. | β | 2000 | β |
| GABAB receptors: a new paradigm in G protein signaling. | Couve A et al. | β | 2000 | β |
| Genomics: from novel genes to new therapeutics in parasitology. | Gutierrez JA | β | 2000 | β |
| Group I, II, and III mGluR compounds affect rhythm generation in the gastric circuit of the crustacean stomatogastric ganglion. | Krenz WD et al. | β | 2000 | β |
| Guanylin peptides: renal actions mediated by cyclic GMP. | Forte LR et al. | β | 2000 | β |
| Localization of nAChR subunit mRNAs in the brain of Macaca mulatta. | Han ZY et al. | β | 2000 | β |
| Localization of the tandem pore domain K+ channel TASK-1 in the rat central nervous system. | Kindler CH et al. | β | 2000 | β |
| Long-term nicotine adaptation in Caenorhabditis elegans involves PKC-dependent changes in nicotinic receptor abundance. | Waggoner LE et al. | β | 2000 | β |
| Mechanisms of guanylin action via cyclic GMP in the kidney. | Forte LR et al. | β | 2000 | β |
| Molecules of the brain. | Levey AI | β | 2000 | β |
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| Nematode Parasitism Genes. | Davis EL et al. | β | 2000 | β |
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| Neuronal KCNQ potassium channels: physiology and role in disease. | Jentsch TJ | β | 2000 | β |
| Neurotrophins: key regulators of cell fate and cell shape in the vertebrate nervous system. | Bibel M et al. | β | 2000 | β |
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| Potassium-channel closure taken to TASK. | North RA | β | 2000 | β |
| Protein interaction mapping in C. elegans using proteins involved in vulval development. | Walhout AJ et al. | β | 2000 | β |
| Regulation of mitogen-activated protein kinase signaling networks by G protein-coupled receptors. | Gutkind JS | β | 2000 | β |
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| Serotonin transporter polymorphism and response to SSRIs in major depression and relevance to anxiety disorders and substance abuse. | Weizman A et al. | β | 2000 | β |
| TASK-3, a novel tandem pore domain acid-sensitive K+ channel. An extracellular histiding as pH sensor. | Rajan S et al. | β | 2000 | β |
| The brain-specific G-protein coupled receptor GPR85 with identical protein sequence in man and mouse maps to human chromosome 7q31. | Hellebrand S et al. | β | 2000 | β |
| The human phosphodiesterase PDE10A gene genomic organization and evolutionary relatedness with other PDEs containing GAF domains. | Fujishige K et al. | β | 2000 | β |
| The large srh family of chemoreceptor genes in Caenorhabditis nematodes reveals processes of genome evolution involving large duplications and deletions and intron gains and losses. | Robertson HM | β | 2000 | β |
| The molecular biology of invertebrate voltage-gated Ca(2+) channels. | Jeziorski MC et al. | β | 2000 | β |
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| Using green fluorescent proteins to study G-protein-coupled receptor localization and trafficking. | Kallal L et al. | β | 2000 | β |
| A phenylalanine hydroxylase gene from the nematode C. elegans is expressed in the hypodermis. | Loer CM et al. | β | 1999 | β |
| Background K+ channels: an important target for volatile anesthetics? | Franks NP et al. | β | 1999 | β |
| Ca(2+)/Calmodulin-dependent protein kinase cascade in Caenorhabditis elegans. Implication in transcriptional activation. | Eto K et al. | β | 1999 | β |
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| Cloning of a new mouse two-P domain channel subunit and a human homologue with a unique pore structure. | Salinas M et al. | β | 1999 | β |
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| Disruption of clh-1, a chloride channel gene, results in a wider body of Caenorhabditis elegans. | Petalcorin MI et al. | β | 1999 | β |
| Divergence of RGS proteins: evidence for the existence of six mammalian RGS subfamilies. | Zheng B et al. | β | 1999 | β |
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| Fluoxetine-resistant mutants in C. elegans define a novel family of transmembrane proteins. | Choy RK et al. | β | 1999 | β |
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| Frontiers in anthelmintic pharmacology. | Geary TG et al. | β | 1999 | β |
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| G proteins, chemosensory perception, and the C. elegans genome project: An attractive story. | Wilkie TM | β | 1999 | β |
| Guanylin regulatory peptides: structures, biological activities mediated by cyclic GMP and pathobiology. | Forte LR | β | 1999 | β |
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| How do antidepressants work? Prospects for genetic analysis of drug mechanisms. | Schafer WR | β | 1999 | β |
| Identification and characterization of a putative C. elegans potassium channel gene (Ce-slo-2) distantly related to Ca(2+)-activated K(+) channels. | Lim HH et al. | β | 1999 | β |
| Imaging synaptic activity in intact brain and slices with FM1-43 in C. elegans, lamprey, and rat. | Kay AR et al. | β | 1999 | β |
| Ion channel genes and human neurological disease: recent progress, prospects, and challenges. | Cooper EC et al. | β | 1999 | β |
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| Mechanisms of life span determination in Caenorhabditis elegans. | Vanfleteren JR et al. | β | 1999 | β |
| Mechano- or acid stimulation, two interactive modes of activation of the TREK-1 potassium channel. | Maingret F et al. | β | 1999 | β |
| Molecular neurogenetics of sexual differentiation and behaviour. | Goodwin SF | β | 1999 | β |
| Molecular tinkering of G protein-coupled receptors: an evolutionary success. | Bockaert J et al. | β | 1999 | β |
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