A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3.
paper
Cited
Public
Unavailable
- Authors
- Cingolani, Pablo; Platts, Adrian; Wang, Le Lily; Coon, Melissa; Nguyen, Tung; Wang, Luan; Land, Susan J; Lu, Xiangyi; Ruden, Douglas M
- Year
- 2012
- Journal
- Fly
- PMID
- 22728672
- DOI
- 10.4161/fly.19695
- PMCID
- PMC3679285
We describe a new computer program, SnpEff, for rapidly categorizing the effects of variants in genome sequences. Once a genome is sequenced, SnpEff annotates variants based on their genomic locations and predicts coding effects. Annotated genomic locations include intronic, untranslated region, upstream, downstream, splice site, or intergenic regions. Coding effects such as synonymous or non-synonymous amino acid replacement, start codon gains or losses, stop codon gains or losses, or frame shifts can be predicted. Here the use of SnpEff is illustrated by annotating ~356,660 candidate SNPs in ~117 Mb unique sequences, representing a substitution rate of ~1/305 nucleotides, between the Drosophila melanogaster w(1118); iso-2; iso-3 strain and the reference y(1); cn(1) bw(1) sp(1) strain. We show that ~15,842 SNPs are synonymous and ~4,467 SNPs are non-synonymous (N/S ~0.28). The remaining SNPs are in other categories, such as stop codon gains (38 SNPs), stop codon losses (8 SNPs), and start codon gains (297 SNPs) in the 5'UTR. We found, as expected, that the SNP frequency is proportional to the recombination frequency (i.e., highest in the middle of chromosome arms). We also found that start-gain or stop-lost SNPs in Drosophila melanogaster often result in additions of N-terminal or C-terminal amino acids that are conserved in other Drosophila species. It appears that the 5' and 3' UTRs are reservoirs for genetic variations that changes the termini of proteins during evolution of the Drosophila genus. As genome sequencing is becoming inexpensive and routine, SnpEff enables rapid analyses of whole-genome sequencing data to be performed by an individual laboratory.
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| Investigating the Genetic Underpinnings of Ongoing Fall Armyworm (FAW) Range Expansion in Aotearoa New Zealand. | Vaughan AL et al. | β | 2026 | β |
| JoGo 1.0: the ACTG hierarchical nomenclature and database covering 4.7 million haplotypes across 19,194 human genes. | Nagasaki M et al. | β | 2026 | β |
| Key Genomic Regions of Rice Cultivar GuiHeFeng and Its Derivatives Revealed by Genome-Wide Analysis. | Chen YZ et al. | β | 2026 | β |
| Large-scale exome analyses reveal new rare variant contributions in amyotrophic lateral sclerosis. | Hop PJ et al. | β | 2026 | β |
| Large-scale testing of antimicrobial lethality at single-cell resolution predicts mycobacterial infection outcomes. | Jovanovic A et al. | β | 2026 | β |
| Limitations of serial cloning in mammals. | Wakayama S et al. | β | 2026 | β |
| Mapping and Functional Characterization of Homologous Genes AhSUCA06 and AhSUCA16 Underlying Sucrose, Oil and Protein Contents in Peanut (Arachis hypogaea L.). | Zheng Y et al. | β | 2026 | β |
| Marine litter drives population expansion of Metridium senile (Cnidaria: Actiniaria): Genomic insights into dual-scale ecological drivers. | Teng G et al. | β | 2026 | β |
| Mechanistic insights into dual-active liver and blood-stage antiplasmodials. | Rawat M et al. | β | 2026 | β |
| Metabolic resistance of the tiger mosquito to pyrethroid insecticides in La RΓ©union Island likely results from local adaptation. | Bacot T et al. | β | 2026 | β |
| Metabolite-based genome-wide association analysis reveals genetic loci and candidate genes affecting breast muscle metabolites in Sansui ducks. | Feng Y et al. | β | 2026 | β |
| Microevolution and stress tolerance of Arabidopsis thaliana from the Chernobyl-affected zone. | Blinova Y et al. | β | 2026 | β |
| Micrometastasis-derived models enable drug testing for early-stage, high-risk melanoma patients. | Weidele K et al. | β | 2026 | β |
| Micropropagation of Cannabis sativa: genetic and epigenetic stability assessment over multiple generations. | Lefebvre V et al. | β | 2026 | β |
| Minor QTLs and the temperature during the grain filling stage contributed to the considerable variation in rice eating and cooking quality. | Huang W et al. | β | 2026 | β |
| Molecular and Clinical Analyses of Gene Fusions Identify Therapeutic Targets in Paired Primary and Metastatic Breast Cancer from the AURORA Program (BIG 14-01). | Biagioni C et al. | β | 2026 | β |
| Molecular mechanism of resistance to lonafarnib conferred by mutations in the cysteine-rich region of respiratory syncytial virus fusion glycoprotein and discovery of a lonafarnib-derived antiviral PROTAC. | Yang Q et al. | β | 2026 | β |
| Multilocus genetic and functional profiling of Indian-origin Lentinula edodes strains: Implications for cultivation and nutraceutical breeding. | Makkar S et al. | β | 2026 | β |
| Multi-omics feature engineering driven by biomedical foundation models improves drug response prediction for inflammatory bowel disease patients. | Gardiner LJ et al. | β | 2026 | β |
| Multi-omics reveals co-regulation of hepatic bile acid metabolism in laying hens by host genetics and the cecal Anaerostipes. | Yang W et al. | β | 2026 | β |
| Multi-omics reveals key molecular and cellular features of advanced small cell lung cancers associated with distinct therapeutic opportunities. | Nones K et al. | β | 2026 | β |
| Multivariate colorimetric phenotyping reveals genetic loci associated with soybean seed coat pigmentation and epicatechin accumulation. | Lee E et al. | β | 2026 | β |
| Mutant transcription factor CopR promotes LDB_RS05285 expression to suppress yogurt post-acidification and enhance texture stability. | Zhao W et al. | β | 2026 | β |
| Mutational landscapes and functional insights in oral cancer and diabetes: A comparative perspective. | Janardan K et al. | β | 2026 | β |
| Mutational patterns in a large cohort of parathyroid carcinomas. | Pandya C et al. | β | 2026 | β |
| Mutational profiles of spontaneous and radiation-related mammary carcinomas in a rat model of Brca1 haploinsufficiency. | Nakamura Y et al. | β | 2026 | β |
| Mutation in HER1 enhances stigma exsertion and hybrid seed production in rice. | Guo D et al. | β | 2026 | β |
| NanoVar: a comprehensive workflow for structural variant detection to uncover the genome's hidden patterns. | Samy A et al. | β | 2026 | β |
| Natural variation in Arabidopsis uncouples leaf and flower development and reveals massive transcriptomic heterochrony. | DieudonnΓ© S et al. | β | 2026 | β |
| Near telomere-to-telomere diploid genome assembly of Acrossocheilus wenchowensis. | Xue L et al. | β | 2026 | β |
| Neoadjuvant palbociclib and endocrine therapy versus chemotherapy in ERβ+β/HER2- breast cancer: a randomized phase II trial. | Matikas A et al. | β | 2026 | β |
| Next-generation sequencing as an applicable method: from technical basis to use in medical diagnosis. | Moradi A et al. | β | 2026 | β |
| Oncogenicity Variant Interpreter: Oncogenicity Guidelines Implementation to Support Somatic Variants Interpretation in Precision Oncology. | Carta MG et al. | β | 2026 | β |
| OsAux1 is required for nutritropism in rice roots. | Yamazaki K et al. | β | 2026 | β |
| Ovary-specific transcriptomes and the essential role of vitelline membrane protein 26Ab in embryonic desiccation resistance and female fertility of Zeugodacus tau. | Xu C et al. | β | 2026 | β |
| Overcoming host restrictions to enable continuous passaging of GII.3 human norovirus in human intestinal enteroids. | Kaur G et al. | β | 2026 | β |
| Pan-genome analysis reveals hidden diversity and selection signatures of auxin response factors (ARFs) associated with breeding in barley. | Tan K et al. | β | 2026 | β |
| Pan-genome of wild and cultivated rice uncovers genetic diversity, lost and selected sequences during rice domestication. | Tao H et al. | β | 2026 | β |
| Parallel Sympatric Divergence Driven by Disruptive Selection Acting on a Magic Temporal Isolation Trait in a Wild Annual Fish. | Yang H et al. | β | 2026 | β |
| Pathogenomic insights and prevalence of the big six Enterohemorrhagic Escherichia coli from cattle and sheep. | GΓΆncΓΌoΔlu M et al. | β | 2026 | β |
| Phage resistance mutations in a marine bacterium impact biogeochemically relevant cellular processes. | Urvoy M et al. | β | 2026 | β |
| Phylogenomic analysis and genetic mechanisms of antifungal resistance in clinical isolates of <i>Candida glabrata</i> (<i>Nakaseomyces glabratus</i>) from across Canada, 2013-2020. | De Luca DG et al. | β | 2026 | β |
| Phylogenomics of Plasmopara halstedii Reveals Genomic Regions Associated With the Breakdown of Sunflower Downy Mildew Resistance Genes. | Pecrix Y et al. | β | 2026 | β |
| Polarising SNPs Without Outgroup. | Liang J et al. | β | 2026 | β |
| PoolSeq Genome-Wide Association Studies and Microbial Signature Analyses Identify Novel Candidates Associated With Pyrethroid Resistance Evolution in Anopheles funestus in Cameroon. | Gadji M et al. | β | 2026 | β |
| Population genomic analysis of Weining chicken via dd-RAD sequencing: Unraveling diversity, structure, and selective sweeps. | Ai Z et al. | β | 2026 | β |
| Population genomics reveals deep diversification in Malayan pangolins. | Li B et al. | β | 2026 | β |
| Population structure analysis of eight goat breeds based on super-genotyping-by-sequencing. | Gou X et al. | β | 2026 | β |
| Population-wide single-pollen nuclei genotyping in rye sheds light on the genetic basis and environmental plasticity of meiotic recombination. | Waesch C et al. | β | 2026 | β |
| Predicting the functional impact of single nucleotide variants in Drosophila melanogaster with FlyCADD. | Beets J et al. | β | 2026 | β |
| Prevalence of deleterious variants in cardiomyopathy genes in early-onset atrial fibrillation. | Vad OB et al. | β | 2026 | β |
| Protein-protein interactions shape trans-regulatory impact of genetic variation on protein expression and complex traits. | Li J et al. | β | 2026 | β |
| PTGDS is a potential marker for lung adenocarcinoma identified in a pancancer analysis. | Wang R et al. | β | 2026 | β |
| PTPN11-related Noonan syndrome predisposes to multifocal low-grade CNS tumors harboring FGFR1 variants. | Kohanbash G et al. | β | 2026 | β |
| Purifying selection on deleterious variants affected by the combination of subgenomes and gene expression in bread wheat. | Halstead-Nussloch G et al. | β | 2026 | β |
| Quick creation and mapping of EMS-induced maize kernel mutants identifies classical gene ZmBT1 and novel gene ZmTOP6A. | Dong H et al. | β | 2026 | β |
| Rare genetic variants confer a high risk of ADHD and implicate neuronal biology. | Demontis D et al. | β | 2026 | β |
| Rare heterozygous missense variants in VSX2 are associated with retinal detachment. | Brock DC et al. | β | 2026 | β |
| Rare regulatory mutations disrupt mesenchymal molecular programs driving endocardial cushion formation in bicuspid aortic valve. | Zhigulev A et al. | β | 2026 | β |
| Recurrent mutations in the stress regulator Cap1 reveal a trade-off between azole resistance and oxidative stress response in Candida albicans. | Zhou X et al. | β | 2026 | β |
| Removal of Transgenes and Evaluation of Yield Penalties in Genome Edited Bacterial Blight Resistant Rice Varieties. | Loo EPI et al. | β | 2026 | β |
| Resistance evaluation and surveillance initiative for schistosomiasis treatment: study protocol for the RESIST project. | Knopp S et al. | β | 2026 | β |
| Resolving sampling and population-size biases in domestication genomics supports a South Asian origin of walnuts. | Chen CJ et al. | β | 2026 | β |
| Response to Immune Checkpoint Blockade Is Enhanced in the Presence of Hematopoietic TET2 Inactivation. | Rondeau V et al. | β | 2026 | β |
| Revisiting the impact of BRCA1 pathogenic variants on the aggressiveness of prostate cancer. | Sasagawa H et al. | β | 2026 | β |
| Salt-stress-induced tomato sweetening involves an SlSnRK2.6-SlZHD8 sugar accumulation cascade triggered by root-derived abscisic acid. | Xu J et al. | β | 2026 | β |
| Sequence Variations in MYB (v-myb Myeloblastosis Viral Oncogene Homolog) Genes Impair Anthocyanin Biosynthesis and Contribute to Yellow Flower Phenotype in <i>Rehmannia glutinosa</i>. | Tang J et al. | β | 2026 | β |
| Sequencing Ultraconserved Elements (UCEs) for Marine Population Genomics: A Proof-of-Concept Using a Deep-Sea Mussel Species. | Li YX et al. | β | 2026 | β |
| Sex chromosome evolution mediated by a large inversion and a possible switch of the sex determination gene. | Mao X et al. | β | 2026 | β |
| Signatures of Radiation-Induced Stress and Putative Selection on Immune Targets in Chornobyl Wolves. | Love CN et al. | β | 2026 | β |
| Spatial and temporal description of antimalarial drug resistance markers in Ghana using targeted amplicon deep sequencing. | Tandoh KZ et al. | β | 2026 | β |
| Species-Specific Variations of A-to-I RNA Editing in Three Tegulidae Gastropods. | Zhu YJ et al. | β | 2026 | β |
| Stepwise recombination suppression around the mating-type locus associated with a diploid-like life cycle in Schizothecium fungi. | De Filippo E et al. | β | 2026 | β |
| Strength of selection potentiates distinct adaptive responses in an evolution experiment with outcrossing yeast. | Phillips MA et al. | β | 2026 | β |
| Stress controls heterochromatin inheritance via histone H3 ubiquitylation. | Bhatt B et al. | β | 2026 | β |
| Structural and Genomic Bases of Branching Traits in Spur-Type Apple: Insights from Morphology and Whole-Genome Resequencing. | Wang H et al. | β | 2026 | β |
| Substitutions in RNA-binding protein Hrp1 map a potential interaction surface with the yeast RNA polymerase II elongation complex. | Wang M et al. | β | 2026 | β |
| Surviving the Squeeze: Genomic Analysis of a Successful Invasion by European Common Wall Lizards (Podarcis muralis) in North America (Ohio, USA). | Bode ER et al. | β | 2026 | β |
| Temperature and genetic background drive mobilization of diverse transposable elements in a global human fungal pathogen. | Mackey AI et al. | β | 2026 | β |
| The annotated blueprint: integrated functional genomic resources for a model tetraploid wheat Triticum turgidum cv Kronos. | Seong K et al. | β | 2026 | β |
| The chromosome-level genome of Chinese indicine cattle breed provides insights into bovine adaptation and immunity. | Ge F et al. | β | 2026 | β |
| The development and validation of a genotyping-by-target sequencing chip for fungal population genetic analysis. | Yan H et al. | β | 2026 | β |
| The Explosive Radiation of the Neotropical Tillandsia Subgenus Tillandsia (Bromeliaceae) Has Been Accompanied by Pervasive Hybridization. | Yardeni G et al. | β | 2026 | β |
| The genetic basis of mimicry in the snowy bumble bee (Bombus niveatus) in Anatolia with insights from a color polymorphic gynandromorph. | Dabak T et al. | β | 2026 | β |
| The genomic impact of population connectivity and decline in Africa's elephants. | PeΔnerovΓ‘ P et al. | β | 2026 | β |
| The Genomics of Convergent Adaptation to Intertidal Gravel Beaches in Mediterranean Clingfishes. | Wagner M et al. | β | 2026 | β |
| The Late Quaternary climate impact on the genome of the woodland strawberry (Fragaria vesca), a perennial herb. | Toivainen T et al. | β | 2026 | β |
| The mutation landscape of Daphnia obtusa reveals evolutionary forces shaping genome stability. | Deng R et al. | β | 2026 | β |
| The pan-plastome of Strobilanthes cusia provided new information about the genetic diversity and cultivation history of an important medicinal and natural dye plant. | Lin Z et al. | β | 2026 | β |
| The Trichinella Super-Pangenome Reveals the Evolution of Encapsulation and Predicted Host-Parasite Protein Interactions. | Lv Q et al. | β | 2026 | β |
| The unique role of <i>nucS</i>-mediated noncanonical mismatch repair in <i>Mycobacterium tuberculosis</i> resistance evolution. | MartΓn-Blecua I et al. | β | 2026 | β |
| Tomato antiviral ubiquitin-proteasome system recognizes viral 59βkDa protein to confer tomato chlorosis virusΒ resistance. | Zhao D et al. | β | 2026 | β |
| Tracing 2500 years of human betaherpesvirus 6A and 6B diversity through ancient DNA. | Guellil M et al. | β | 2026 | β |
| Transcriptomic signatures of highβintensity pyrethroid resistance in Anopheles gambiae from a Cameroonian agricultural hotspot. | Tepa A et al. | β | 2026 | β |
| Trans-QTL Alliance of HKT1 and PHL7 Modulate Salinity Stress Tolerance and Enhance Crop Yield Endurance. | Mohanty JK et al. | β | 2026 | β |
| Tumor DNA methylation subtypes predict immunotherapy outcomes in pleural mesothelioma patients in the NIBIT-EPI-MESO study. | CalabrΓ² L et al. | β | 2026 | β |
| Tutorial for variant interrogation in tumor samples. | Arseneau RJ et al. | β | 2026 | β |
| Unidirectional genomic introgression facilitates the colonization of an invasive orchid in arid, metal-enriched sedimentary habitats. | Jiao Z et al. | β | 2026 | β |
| Unlocking genetic diversity in Colombian cassava landraces for accelerated breeding. | Zhao K et al. | β | 2026 | β |
| Unraveling the population genetic structure and identifying candidate genes for dorsal plumage color in Liangshan Yanying chickens. | Yu J et al. | β | 2026 | β |
| Updated compendium of genes and variants associated with congenital hypogonadotropic hypogonadism: systematic review, classification pipeline, and network analysis. | Brunello FG et al. | β | 2026 | β |
| When South Meets North: A Joint Contact Zone Coinciding With Environmental Gradients in Three Boreal Tree Species. | Herrera-Egoavil P et al. | β | 2026 | β |
| Whole genome sequencing from dried blood spots for newborn screening of Menkes disease and 36 other actionable inherited neurometabolic disorders. | Kaler SG et al. | β | 2026 | β |
| Whole-genome sequencing of 2032 diverse tobacco accessions reveals genetic variation and population differentiation. | Zheng X et al. | β | 2026 | β |
| Whole-Genome Sequencing Reveals Genetic Diversity and Structure of Taiwan Commercial Red-Feathered Country Chickens. | Hsiao YW et al. | β | 2026 | β |
| Whole-genome sequencing reveals novel ryanodine receptor mutations P4568L and Y4701D conferring high-level chlorantraniliprole resistance in Spodoptera litura (Lepidoptera: Noctuidae). | Chen Y et al. | β | 2026 | β |
| YamOmics: a comprehensive data resource on yam multi-omics. | Zhao Y et al. | β | 2026 | β |
| 2b-RAD sequencing of Malus florentina populations reveals strong population structure and signals of balancing selection at disease resistance loci. | Papp D et al. | β | 2025 | β |
| A BRASSINOSTEROID INSENSISTIVE 1 receptor kinase ortholog is required for sex determination in Ceratopteris richardii. | Burow KM et al. | β | 2025 | β |
| Abundant A-to-I RNA editing in spermatocytes may suppress transposons to compensate for piRNA downregulation in male germlines. | Duan Y et al. | β | 2025 | β |
| Abundant Recurrent Mitochondrial Mutations and Widespread Mitonuclear Epistasis in Caenorhabditis elegans. | Nguyen THM et al. | β | 2025 | β |
| Accurate detections of the heterozygous SNPs with rice genomic data and prediction of de novo spontaneous mutation rate. | Balimponya EG et al. | β | 2025 | β |
| Accurate Identification of Native Asian Honey Bee Populations in Jilong (Xizang, China) by Population Genomics and Deep Learning. | Liu Z et al. | β | 2025 | β |
| A Chromosome Inversion Creates a Supergene for Sex and Colour in Lake Malawi Cichlids. | Behrens KA et al. | β | 2025 | β |
| A clinico-genomic prognostic model for primary myelodysplastic neoplasm in Asia. | Gill H et al. | β | 2025 | β |
| A Comparative Study of Epstein-Barr Virus Genomes Detected in Tumor, Nasopharyngeal Swab, and Saliva Samples From Patients With Nasopharyngeal Carcinoma. | Liang J et al. | β | 2025 | β |
| A complex interplay of genetic introgression and local adaptation during the evolutionary history of three closely related spruce species. | Feng S et al. | β | 2025 | β |
| A comprehensive multi-omics analysis uncovers the associations between gut microbiota and pancreatic cancer. | Han Y et al. | β | 2025 | β |
| Activation of the ChvG-ChvI pathway promotes survival during cell wall stress in <i>Agrobacterium tumefaciens</i>. | Bouchier JM et al. | β | 2025 | β |
| Adaptation of the Cyst Nematode Globodera pallida to the Colinear Potato Resistant QTLs GpaV<sub>vrn</sub> and GpaV<sub>spl</sub> Involved Distinct Genomic Regions and Absence of Cross-Virulence. | Lechevalier O et al. | β | 2025 | β |
| Adaptation to Hot and Humid Climates in the Silkworm: Energy Reallocation and Cuticle Transpiration. | Zhuo J et al. | β | 2025 | β |
| Adaptive Evolution for Freshwater Adaptation in Coilia nasus by Directional Selection on Osmoregulation Genes. | Han S et al. | β | 2025 | β |
| Adaptive introgression in modern human circadian rhythm genes. | Kendall C et al. | β | 2025 | β |
| A deletion at the X-linked ARHGAP36 gene locus is associated with the orange coloration of tortoiseshell and calico cats. | Toh H et al. | β | 2025 | β |
| A de novo-originated gene drives rose scent diversification. | Li Y et al. | β | 2025 | β |
| Adjuvant nivolumab in muscle-invasive urothelial carcinoma: exploratory biomarker analysis of the randomized phase 3 CheckMate 274 trial. | Galsky MD et al. | β | 2025 | β |
| Admixture and selection offer insights for the conservation and breeding of Guyuan cattle. | Liu S et al. | β | 2025 | β |
| Advancing precision oncology with AI-powered genomic analysis. | Srivastava R | β | 2025 | β |
| Aeronautical Mutagenesis and Whole-genome Resequencing Reveal the Genetic Basis of Color Change in <i>Naematelia aurantialba</i>. | Zeng Y et al. | β | 2025 | β |
| A FAM8A1 frameshift variant is associated with REM sleep behavior disorder, urinary retention, and mydriasis in Russian Blue cats. | Stee K et al. | β | 2025 | β |
| A fixed mutation in the respiratory complex I impairs mitochondrial bioenergetics in the endangered Apennine brown bear. | Trucchi E et al. | β | 2025 | β |
| A Forward Genetics Strategy for High-Throughput Gene Identification via Precise Image-Based Phenotyping of an Indexed EMS Mutant Library. | Wang H et al. | β | 2025 | β |
| A framework for identifying and prioritizing SNPs in genes of the hypothalamic- pituitary-gonadal axis in Guzerat cattle using amplicon-based NGS. | Marcuzzi O et al. | β | 2025 | β |
| A genome resource for the marine annelid Platynereis spp. | Mutemi KN et al. | β | 2025 | β |
| A Genome-Wide Analysis of Structure and Evolution in Irish and British Populations of <i>Bombus terrestris</i> (L. 1758): Implications for Genetic Resource Conservation. | Larragy SJ et al. | β | 2025 | β |
| A genome-wide investigation of insidious uveitis in Appaloosa horses. | Kingsley NB et al. | β | 2025 | β |
| A haplotype-based evolutionary history of barley domestication. | Guo Y et al. | β | 2025 | β |
| A Hitchhiker's Guide to long-read genomic analysis. | Mahmoud M et al. | β | 2025 | β |
| Allele Mining of Seed-Related Genes Reveals Early movement, Selection and Adaptation of Asian Rice Landraces. | Wu CC et al. | β | 2025 | β |
| Allelic differences within DNA polymerase delta subunit 1 correlate with geminivirus resistance in diverse plants. | Gilbert KB et al. | β | 2025 | β |
| Allelic variation and duplication of the dmrt1 were associated with sex chromosome turnover in three representative Scatophagidae fish species. | Huang YQ et al. | β | 2025 | β |
| Allelic variation in a cluster of epsilon glutathione S-transferase genes contributes to DDT and pyrethroid resistance in the major African malaria vector Anopheles funestus. | Kouamo MFM et al. | β | 2025 | β |
| ALOXE3 missense variant in a Chihuahua with autosomal recessive ichthyosis. | Vinberg C et al. | β | 2025 | β |
| Altered microbiota of the lower respiratory tract and its association with COVID-19 severity analysed by metagenomics and metatranscriptomics. | Wang D et al. | β | 2025 | β |
| Alzheimer's Disease Sequencing Project release 4 whole genome sequencing dataset. | Leung YY et al. | β | 2025 | β |
| Amplicon sequencing of pasteurized retail dairy enables genomic surveillance of H5N1 avian influenza virus in United States cattle. | Lail AJ et al. | β | 2025 | β |
| A Multipurpose Microhaplotype Panel for Genetic Analysis of California Chinook Salmon. | Anderson EC et al. | β | 2025 | β |
| An ADAR2-mimic base editor for efficient C-to-U RNA editing in vivo. | Hao C et al. | β | 2025 | β |
| Analysis of gene expansion and defense-related genes in Anacardiaceae family from an evolutionary aspect. | Fan BL et al. | β | 2025 | β |
| Analysis of the genetic diversity of the soybean rust pathogen Phakopsora pachyrhizi reveals two major evolutionary lineages. | Rocha VDD et al. | β | 2025 | β |
| Analysis of the genetic structure and selection signatures of Xiangyang black pigs using whole-genome resequencing data. | Xu Z et al. | β | 2025 | β |
| An animal toxin-antidote system kills cells by creating a novel cation channel. | Caro L et al. | β | 2025 | β |
| AnatomyArray: A high-throughput platform for anatomical phenotyping in plants. | Cheng Y et al. | β | 2025 | β |
| An elite allele TaDT1-A<sup>hapI</sup> enhances drought tolerance via mediating autophagic pathways in wheat. | Liu X et al. | β | 2025 | β |
| An explainable artificial intelligence framework reveals mutations associated with drug resistance in <i>Mycobacterium tuberculosis</i>. | Cen H et al. | β | 2025 | β |
| A north-south hemispheric migratory divide in the butterfly Vanessa cardui. | GarcΓa-Berro A et al. | β | 2025 | β |
| A novel frameshift variant in ALS2 associated with segmental axonopathy in Merino sheep. | Eager KLM et al. | β | 2025 | β |
| A novel HEXA frameshift mutation identified in Angus cattle with GM2 gangliosidosis. | Eager KLM et al. | β | 2025 | β |
| An updated Gallus gallus genome annotation through multi-tissue transcriptome analysis. | de Lima AO et al. | β | 2025 | β |
| A pan-azole and pan-echinocandin resistant Wickerhamomyces anomalus isolate causing bloodstream infection: ERG11<sup>Y140F</sup>, <sup>K151R</sup> with copy number variation and FKS1<sup>F665S</sup> mutation. | Luo Z et al. | β | 2025 | β |
| A pangenome reference of wild and cultivated rice. | Guo D et al. | β | 2025 | β |
| A point mutation in the photosystem II protein PsbW disrupts thylakoid organization and alters starch granule formation. | Ilse TE et al. | β | 2025 | β |
| A Population Genomics Approach to Understand the Diversity, Migration, and Reproduction of the Rice Pathogen <i>Cercospora janseana</i>. | Searight J et al. | β | 2025 | β |
| Application and Progress of Genomics in Deciphering the Genetic Regulation Mechanisms of Plant Secondary Metabolites. | Liu C et al. | β | 2025 | β |
| A quinolone N-oxide antibiotic selectively targets Neisseria gonorrhoeae via its toxin-antitoxin system. | Mix AK et al. | β | 2025 | β |
| Archaic adaptive introgression in modern human reproductive genes. | Kendall C et al. | β | 2025 | β |
| Artificial intelligence coupled to pharmacometrics modelling to tailor malaria and tuberculosis treatment in Africa. | Turon G et al. | β | 2025 | β |
| A splice donor variant in <i>SLAMF1</i> is associated with canine atopic dermatitis. | Forman OP et al. | β | 2025 | β |
| Assessing genetic diversity and performing genome-wide association studies (GWAS) using multiple marker types across desi, kabuli, and wild accessions in chickpea (Cicer arietinum L.). | Ruperao P et al. | β | 2025 | β |
| Assessing In Silico Tools for Accurate Pathogenicity Prediction in CHD Nucleosome Remodelers. | Rabouhi N et al. | β | 2025 | β |
| Assessment of genomic prediction capabilities of transcriptome data in a barley multi-parent RIL population. | Arlt C et al. | β | 2025 | β |
| Assessment of peripheral blood DNA methylation signatures as pharmacodynamic and predictive biomarkers during azacitidine therapy in juvenile myelomonocytic leukaemia: Results of the EWOG-MESRAT study. | SchΓΆnung M et al. | β | 2025 | β |
| Association between genomic single nucleotide polymorphisms and susceptibility of Talaromyces marneffei. | Li X et al. | β | 2025 | β |
| Association genetics and genomic prediction for resistance to root rot in a diverse collection of Pisum sativum L. | Ariza-Suarez D et al. | β | 2025 | β |
| Association of Pathogenic/Likely Pathogenic Genetic Variants for Cardiomyopathies With Clinical Outcomes: A Multiancestry Analysis in the All of Us Research Program. | Shetty NS et al. | β | 2025 | β |
| Association of Spexin Gene Polymorphisms with Serum Spexin Levels and Biochemical Parameters in Iraqi Women with Type 2 Diabetes Mellitus: A Case-Control Study. | Shamkhi FH et al. | β | 2025 | β |
| A synonymous single nucleotide variant on the FAM20C gene causes non-lethal Raine syndrome. | Toraman B et al. | β | 2025 | β |
| A systems-based approach to uterine fibroids identifies differential splicing associated with abnormal uterine bleeding. | Wang CY et al. | β | 2025 | β |
| A telomere-to-telomere gap-free assembly integrating multi-omics uncovers the genetic mechanism of fruit quality and important agronomic trait associations in pomegranate. | Chen L et al. | β | 2025 | β |
| A transcription factor gene CaMYB114 associated with black seed coat in chickpea. | Luo H et al. | β | 2025 | β |
| A transposon insertion in <i>CmKNAT2-like2</i> disrupts mottled rind formation in melon (<i>Cucumis melo</i> L.). | Li S et al. | β | 2025 | β |
| Augmenting precision medicine via targeted RNA-Seq detection of expressed mutations. | Li D et al. | β | 2025 | β |
| A unique case of late-onset CIPO caused by a missense mutation in the long isoform of <i>FLNA</i>. | D'Amato I et al. | β | 2025 | β |
| Avian Paramyxovirus Type 1 from Wild Birds: Population Adaptation and Immunogenicity in Chickens. | Espejo R et al. | β | 2025 | β |
| A wheat CC-NBS-LRR protein Ym1 confers WYMV resistance by recognizing viral coat protein. | Chen Y et al. | β | 2025 | β |
| Balancing selection of climate adaptive loci underlies the success of introduction of Eurasian Tree Sparrows. | Chen Y et al. | β | 2025 | β |
| Base editing of BnaFAD2 fine-tunes oleic acid content in allotetraploid rapeseed without compromising yield. | Wang J et al. | β | 2025 | β |
| BCL-2 Family Inhibition Enhances mTORC1/2 Inhibition in PIK3CA-Mutant Colorectal Cancer. | DeStefanis RA et al. | β | 2025 | β |
| Biosurveillance of Invasive Southern Corn Rust: Insights Into Recent Migration Patterns and Virulence Variation. | Li Y et al. | β | 2025 | β |
| Bivariate GWAS performed on rabbits divergently selected for intramuscular fat content reveals pleiotropic genomic regions and genes related to meat and carcass quality traits. | Sosa-Madrid BS et al. | β | 2025 | β |
| BlihIA-A Novel Type I Restriction-Modification System from <i>Bacillus licheniformis</i> Is Sensitive to In Vitro Inhibition by ArdB Antirestriction Protein. | Kudryavtseva A et al. | β | 2025 | β |
| Bringing tuberculosis genomics to the clinic: development and validation of a comprehensive pipeline to predict antimicrobial susceptibility from genomic data, accredited to ISO standards. | Horan KA et al. | β | 2025 | β |
| Bulk Segregant Analysis Reveals Genomic Regions Associated With Imidacloprid Resistance in the Colorado Potato Beetle. | Edison A et al. | β | 2025 | β |
| Candidate gene identification and marker development for seed coat peeling rate in peanut (Arachis Hypogaea L.). | Liu H et al. | β | 2025 | β |
| Case-Control Study for 23 Cancer Types With Functional Analysis of <i>CHEK2</i>: Risk Estimation and Clinical Recommendations in East Asia. | Takehara Y et al. | β | 2025 | β |
| CDKN2A alternations in non-small cell lung cancer: An evaluation using next-generation sequencing. | Feng X et al. | β | 2025 | β |
| Ceftazidime-avibactam use selects multidrug-resistance and prevents designing collateral sensitivity-based therapies against Pseudomonas aeruginosa. | Hernando-Amado S et al. | β | 2025 | β |
| Cell type mapping of mild malformations of cortical development with oligodendroglial hyperplasia in epilepsy using single-nucleus multiomics. | GalvΓ£o IC et al. | β | 2025 | β |
| Changes in intra-host mycovirus population diversity after vertical and horizontal transmission. | PeraniΔ K et al. | β | 2025 | β |
| Characterisation of a persistent SARS-CoV-2 infection lasting more than 750 days in a person living with HIV: a genomic analysis. | Velasquez-Reyes JM et al. | β | 2025 | β |
| Characterisation of <i>in vitro</i> resistance selection against second-/last-line antibiotics in methicillin-resistant <i>Staphylococcus aureus</i> ATCC 43300 strain. | Prasetyoputri A et al. | β | 2025 | β |
| Characterisation of the Historic Demographic Decline of the British European Polecat Population. | Shaw R et al. | β | 2025 | β |
| Characterization of Bunch Compactness in a Diverse Collection of <i>Vitis vinifera</i> L. Genotypes Enriched in Table Grape Cultivars Reveals New Candidate Genes Associated with Berry Number. | Meneses M et al. | β | 2025 | β |
| Characterization of Plasmodium falciparum infections among people living with HIV under antiretroviral and co-trimoxazole chemoprophylaxis in Brazzaville, Republic of Congo. | Djontu JC et al. | β | 2025 | β |
| Characterizing the mutational landscape of sinonasal squamous cell carcinoma using whole-exome sequencing. | Vareta JA et al. | β | 2025 | β |
| Chromosome-level comparative genomics and host-specific fungal transcriptomics uncover adaptive virulence strategies in the sugarcane smut pathogen. | Vilanova PF et al. | β | 2025 | β |
| Chromosome-Level Genome and Variation Map of Eri Silkworm <i>Samia cynthia ricini</i>. | Lu K et al. | β | 2025 | β |
| Chromosome-level genome assembly of the king horseshoe bat (Rhinolophus rex) provides insights into its conservation status and chromosomal evolution of Rhinolophus. | Lan L et al. | β | 2025 | β |
| Chromosome-scale genome assembly and annotation of two geographically distinct strains of malaria vector Anopheles albimanus. | Derilus D et al. | β | 2025 | β |
| Circulating Tumor DNA Profiling Identifies Actionable Mutations as Prognostic Markers in Advanced Neuroendocrine Tumors. | Zhou N et al. | β | 2025 | β |
| Clinical characteristics of EYS-associated retinal dystrophy in 291 Japanese patients. | Koyanagi Y et al. | β | 2025 | β |
| Clinical response to azacitidine in MDS is associated with distinct DNA methylation changes in HSPCs. | Thoms JAI et al. | β | 2025 | β |
| Clonal Expansion from Standing Genetic Variation Underpins the Evolution of <i>Curtobacterium flaccumfaciens</i> pv. <i>flaccumfaciens</i> in Australia. | Sparks AH et al. | β | 2025 | β |
| Coexisting With Humans: Genomic and Behavioral Consequences in a Small and Isolated Bear Population. | Fabbri G et al. | β | 2025 | β |
| Common gardens reveal genomic susceptibility and vulnerability to climate change in Eucalyptus. | Zhu X et al. | β | 2025 | β |
| Comparative analysis of RAD-seq methods for SNP discovery and genetic diversity assessment in oil seed crop safflower. | Pathania P et al. | β | 2025 | β |
| Comparative analysis the complete chloroplast genomes in wild Musa species of India for its phylogenetic and taxonomic implications. | Pathania P et al. | β | 2025 | β |
| Comparative genomic analysis of Acer tsinglingense and A.Β davidii provides insights into nervonic acid biosynthesis, population evolution and genome vulnerability of endangered A. tsinglingense. | Meng X et al. | β | 2025 | β |
| Comparative genomic analysis of multiple mammary tumors from a single dog: whole-genome sequencing study. | Kim K et al. | β | 2025 | β |
| Comparative genomic analysis of QTL for resistance to Aphanomyces euteiches between pea, lentil, faba bean, and the model species Medicago truncatula. | LeprΓ©vost T et al. | β | 2025 | β |
| Comparative Genomics and Draft Genome Assembly of the Elite Tunisian Date Palm Cultivar Deglet Nour: Insights into the Genetic Variations Linked to Fruit Ripening and Quality Traits. | Zarkouna R et al. | β | 2025 | β |
| Comparative genomics of Shiga toxin-producing <i>Escherichia coli</i> reveals host-specific adhesiome adaptations in humans and cattle. | MartΓnez V et al. | β | 2025 | β |
| Comparative mutant analyses reveal a novel mechanism of ARF regulation in land plants. | Prigge MJ et al. | β | 2025 | β |
| Complete genomes of Rickettsia typhi reveal a clonal population. | Keeratipusana C et al. | β | 2025 | β |
| Complete genomes reveal the full extent of <i>Mycobacterium tuberculosis</i> complex diversity across evolutionary scales | GarcΓa-MarΓn AM et al. | β | 2025 | β |
| Comprehensive analysis of prognosis markers with molecular features derived from pan-cancer whole-genome sequences. | Kato M et al. | β | 2025 | β |
| Comprehensive detection of structural variations in long and short reads dataset of French cattle. | Naji MM et al. | β | 2025 | β |
| Comprehensive Genetic Map of Muscle Lipidome Reveals Novel Insights Into Flavor Variation in Ruminant Meat. | Zhang X et al. | β | 2025 | β |
| Comprehensive genome analysis of <i>Mycobacterium avium</i> subsp. <i>paratuberculosis</i> in camels from Saudi Arabia: Molecular epidemiology and antimicrobial resistance. | Salem M et al. | β | 2025 | β |
| Comprehensive GWAS and transcriptome analysis discovered new candidate genes for powdery mildew response in pea (Pisum sativum L.). | Zhong X et al. | β | 2025 | β |
| Comprehensive Multi-omics Analysis of Regulatory Variants for Body Weight in Cattle. | Niu ηηΎ€η Q et al. | β | 2025 | β |
| Comprehensive Transcriptomic Analysis and Experimental Validation of Notochordal Cells and Nucleus Pulposus Cells: Uncovering Novel Therapeutic Targets for Intervertebral Disc Degeneration. | Li Y et al. | β | 2025 | β |
| Conservation Arks: Genomic Erosion and Inbreeding in an Abundant Island Population of Koalas. | Gates K et al. | β | 2025 | β |
| Conserved chromatin regulators control the transcriptional immune response to intracellular pathogens in Caenorhabditis elegans. | Tecle E et al. | β | 2025 | β |
| Constraints to gene flow increase the risk of genome erosion in the Ngorongoro Crater lion population. | Dussex N et al. | β | 2025 | β |
| Construction of an ultrahigh-density genetic linkage map for Manihot esculenta Crantz and identification of QTL for root quantity traits. | Liu Q et al. | β | 2025 | β |
| Continent-wide view of genomic diversity and divergence in the wolves of Asia. | Hennelly LM et al. | β | 2025 | β |
| Contrasting Evolutionary Trajectories Under Paternal Genome Elimination in Male and Female Citrus Mealybugs. | Mongue AJ et al. | β | 2025 | β |
| Copy number and structural variant analyses of VHL gene using droplet digital PCR and targeted adaptive sampling long-read sequencing. | Kato S et al. | β | 2025 | β |
| ctDNA detects residual disease after neoadjuvant chemoradiotherapy and guides adjuvant therapy in esophageal squamous cell carcinoma. | Liu Z et al. | β | 2025 | β |
| Decoding the genome of Brainea insignis reveals insights into fern evolution and conservation. | Xia Z et al. | β | 2025 | β |
| Decoding VZV's evolutionary arsenal: how Beijing strains use recombination and adaptive mutations to thrive. | Han X et al. | β | 2025 | β |
| Deep sequencing of circulating tumour DNA as a biomarker of clinical outcome to transarterial chemoembolisation in hepatocellular carcinoma. | Sharma R et al. | β | 2025 | β |
| Deep short-read sequences facilitated identification of seven putative drought tolerance genes in a genome-wide association study in soybean. | Parajuli A et al. | β | 2025 | β |
| Delineating molecular mechanisms on the acquisition of <i>in vitro-</i>adapted colistin-resistant <i>Klebsiella pneumoniae</i> by transcriptomic analysis. | Kyung SM et al. | β | 2025 | β |
| De Novo Missense Variant in Bovine WDR33 Associated With a Complex Syndromic Form of Cleft Palate With Pentalogy of Fallot and Internal Hydrocephalus. | Bolcato M et al. | β | 2025 | β |
| Detection and variant characterization of lumpy skin disease virus from dairy cattle in India. | Bajpai M et al. | β | 2025 | β |
| Detection of a hydrogen sulfide-negative <i>Salmonella</i> Typhimurium from cattle feces in a cross-sectional study of cow-calf herds in the Southeastern United States. | Bentum KE et al. | β | 2025 | β |
| Detection of Circulating mRNA Variants in Hepatocellular Carcinoma Patients Using Targeted RNAseq. | Zezulinski D et al. | β | 2025 | β |
| Detection of Selection Signatures and Genome-Wide Association Analysis of Body Weight Traits in Xianan Cattle. | Zhu H et al. | β | 2025 | β |
| Detection of the Candidate Genes of Economically Important Traits in Dorper Sheep Through Whole-Genome Resequencing. | Wang Z et al. | β | 2025 | β |
| Deubiquitinase ZmUBP5 is essential for maize kernel development. | Dong H et al. | β | 2025 | β |
| Developing a crop- wild-reservoir pathogen system to understand pathogen evolution and emergence. | McMullan M et al. | β | 2025 | β |
| Development and application of an updated haplotype reference panel for association analysis of spontaneous sex reversal in XX rainbow trout. | Liu S et al. | β | 2025 | β |
| Development and Characterization of New SSR Markers in <i>Sclerotinia sclerotiorum</i> Using Genomic and Variant Analysis. | Lee DJ et al. | β | 2025 | β |
| Development and Characterization of Wheat-<i>Thinopyrum elongatum</i> 1B-1E Translocation Lines with Fusarium Head Blight Resistance. | Wang C et al. | β | 2025 | β |
| Development and validation of sex-associated markers using whole-genome re-sequencing in frog <i>Quasipaa spinosa</i>. | Zhang L et al. | β | 2025 | β |
| Development of a Liquid-Phased Probe Array for Upland Cotton and Its Application in Cultivar Identification. | Tian H et al. | β | 2025 | β |
| Development of a whole-exome sequencing kit to facilitate porcine biomedical research. | Vijayakumar V et al. | β | 2025 | β |
| Development of cleaved amplified polymorphic sequence marker for powdery mildew resistance in Korean malting barley using QTL-seq. | Park JC et al. | β | 2025 | β |
| Differences in allele frequencies of personality-related genes in three varieties of Shiba Inu in Japan. | Arahori M et al. | β | 2025 | β |
| Differences in gene expression and genetic variation underlying preference-performance mismatches: insights from a specialized native herbivore on an invasive toxic plant. | Ravikanthachari N et al. | β | 2025 | β |
| Differentiation of European yellow rust subraces within the 'Warrior(-)' genetic group. | Breitkreuz C et al. | β | 2025 | β |
| Digenic Inheritance Mode in Congenital Hypothyroidism Due to Thyroid Dysgenesis: HYPOTYGEN Translational Cohort Study. | Stoupa A et al. | β | 2025 | β |
| Directed evolution of a staphylophage under biofilm and planktonic conditions. | Valdivia C et al. | β | 2025 | β |
| Discovery of globally rare CYP51 mutations associated with azole resistance in Iranian Zymoseptoria tritici isolates. | Esfehani A et al. | β | 2025 | β |
| Discovery of variation in genes related to agronomic traits by sequencing the genome of Cucurbita pepo varieties. | PΓ©rez-Moro C et al. | β | 2025 | β |
| Disrupting cross-adaptation in high-risk MRSA: Sanguinarine as a multi-effective stress sensitizer for environmental and food safety. | Ma Q et al. | β | 2025 | β |
| Disruption of normal stem cell function and transmission of myelodysplastic syndrome by self-renewal of committed myeloid lineage cells. | Chung YJ et al. | β | 2025 | β |
| Dissecting seed composition QTL from wild soybean: fine-mapping, candidate gene identification, and evaluation of introgression effects on agronomic performance. | De Meyer E et al. | β | 2025 | β |
| Dissection of the Ren6 and Ren7 powdery mildew resistance loci in Vitis piasezkii DVIT2027 using phased parental-progeny genomes and intraspecific locus graph reconstruction. | Massonnet M et al. | β | 2025 | β |
| Distinct genetic alterations in CD10-negative MUM1-positive follicular lymphoma. | Yang Y et al. | β | 2025 | β |
| Distinct routes to thermotolerance in the fungal pathogen Cryptococcus neoformans. | Schwiesow MJW et al. | β | 2025 | β |
| Divergence of underlying mechanisms in response to alkalinity conditions between two crucian carp (Carassius auratus) populations. | Zhang K et al. | β | 2025 | β |
| DLBCL Cells Emerge after CD19 CAR T Cells with Cross-Antigen Resistance and a Gene Signature Predictive of Clinical CAR T-cell Response. | LΓΌΓΆnd F et al. | β | 2025 | β |
| Donor Variability and Seeding Density Shape NK-Cell Proliferation and Surface Receptor Expression: Insights from an Integrated Phenotypic and Genetic Analysis. | Kusch N et al. | β | 2025 | β |
| Double-stranded DNA deaminase DddA<sup>E1347A</sup> can increase the efficiency and targeting range of cytidine base editors. | Qian Y et al. | β | 2025 | β |
| DTC-Flow: a flow cytometry-based detection platform for characterizing bone marrow disseminated tumor cells in breast cancer. | Chislock EM et al. | β | 2025 | β |
| Dual genetic loci and flavonoid metabolism orchestrate fruiting body coloration in Flammulina filiformis: a multi-omic roadmap for fungal pigmentation. | Lv ZW et al. | β | 2025 | β |
| Durum wheat mutants with enhanced disease resistance to stripe rust show differential responses to other fungal diseases. | Lunde C et al. | β | 2025 | β |
| Dynamics of Deleterious Mutations and Purifying Selection in Small Population Isolates. | Chen Y et al. | β | 2025 | β |
| Early detection of SARS-CoV-2 variants using genomic surveillance: insights from aircraft wastewater and nasal swabs at Kigali International Airport, Rwanda. | Gashegu M et al. | β | 2025 | β |
| Early germline sequestration in a basidiomycete fungus. | ThorΓ©n MH et al. | β | 2025 | β |
| Early-life viability selection targets deleterious mutations in exons. | Chen RS et al. | β | 2025 | β |
| Early lipid genetics: identification of common and rare genetic variants for lipid traits in Indian adolescents. | Nair JM et al. | β | 2025 | β |
| Effective Purging and Conservation of Heterozygous Regions During Independent Evolution to High-Level Inbreeding in Wild Paradise Fishes. | Wang Z et al. | β | 2025 | β |
| Effects of resource packaging on the adaptative and pleiotropic consequences of evolution. | Ahlawat N et al. | β | 2025 | β |
| Efficacy of artesunate-amodiaquine for the treatment of uncomplicated Plasmodium falciparum malaria among children aged 2-11Β years in the Asante Akim North Municipality, Ghana: a single-arm open trial. | Hanson H et al. | β | 2025 | β |
| Efficacy of pembrolizumab and vorinostat combination in patients with recurrent and/or metastatic squamous cell carcinomas: a phase 2 basket trial. | Borcoman E et al. | β | 2025 | β |
| EFNB3 Frameshift Variant in Weimaraner Dogs with a Condition Resembling a Congenital Mirror Movement Disorder. | Schwarz C et al. | β | 2025 | β |
| Egg-laying ChickenGTEx resource deciphers context-specific regulatory effects on fertility traits. | Zhu D et al. | β | 2025 | β |
| Elective genomic screening: results of the implementation of a whole genome sequencing program at a medical check-up unit in Spain. | Palao B et al. | β | 2025 | β |
| EMS-induced genomic variation and QTL-seq analysis of safflower spininess through whole genome sequencing (WGS). | Karami-Moalem S et al. | β | 2025 | β |
| Enhanced resistance of metal sequestering agents by reconfiguration of the Staphylococcus aureus cell wall. | Paterson JR et al. | β | 2025 | β |
| Enhancing bovicin HC5 production in Streptococcus equinus HC5 through adaptive laboratory evolution under thermal stress. | Dias RG et al. | β | 2025 | β |
| Enhancing oil feedstock utilization for high-yield low-carbon polyhydroxyalkanoates industrial bioproduction. | Jiang T et al. | β | 2025 | β |
| Environmental monitoring and equipment sanitation to mitigate <i>Listeria</i> risks in a soil-based controlled environment agriculture system. | Ayala-San NicolΓ‘s M et al. | β | 2025 | β |
| Environment-by-Environment Interactions Differ Across Genetic Backgrounds. | Schmidlin K et al. | β | 2025 | β |
| Epileptic encephalopathy in a young Bengal cat caused by CAD deficiency. | Kaczmarska A et al. | β | 2025 | β |
| Establishment and genetic characterization of zebrafish RW line. | Sadamitsu K et al. | β | 2025 | β |
| Establishment of Initiated Cell Line Derived From NIH3T3 Fibroblasts. | Ro MH et al. | β | 2025 | β |
| Evaluating the roles of drift and selection in trait loss along an elevational gradient. | Buysse SF et al. | β | 2025 | β |
| Evaluation and genome-wide association study of saline-alkali tolerance in high-latitude rice resource populations. | Wang R et al. | β | 2025 | β |
| Evolution and phylogenetic characteristics of the first <i>Brucella canis</i> strain isolated from a human patient in Yunnan Province, China. | Yang Q et al. | β | 2025 | β |
| Evolutionary divergence on the Qinghai-Xizang Plateau: How life-history traits shape the diversity of plateau zokor and pika populations. | Wei Y et al. | β | 2025 | β |
| Evolutionary dynamics of recurrent hepatocellular carcinoma under divergent immune selection pressures. | Chakravarthy A et al. | β | 2025 | β |
| Evolution of cross-tolerance to metals in yeast. | Bazzicalupo AL et al. | β | 2025 | β |
| Evolution of Mycobacterium tuberculosis transcription regulation is associated with increased transmission and drug resistance. | Culviner PH et al. | β | 2025 | β |
| Exceedingly low genetic diversity in snow leopards due to persistently small population size. | Solari KA et al. | β | 2025 | β |
| Exome sequencing of a Portuguese cohort of early-onset Alzheimer's disease implicates the X-linked lysosomal gene GLA. | TΓ‘buas-Pereira M et al. | β | 2025 | β |
| Expanding the Phenotypic Spectrum Associated with DPH5-Related Diphthamide Deficiency. | Politano D et al. | β | 2025 | β |
| Expansion of the functional genomics GRACE library reveals genes relevant for temperature-dependent fitness in Candida albicans. | Fu C et al. | β | 2025 | β |
| Experimental evolution of a pathogen confronted with innate immune memory increases variation in virulence. | KorΕ‘a A et al. | β | 2025 | β |
| Experimental Validation of Genome-Environment Associations in Arabidopsis. | Luo Y et al. | β | 2025 | β |
| Exploring additive and non-additive genetic models to decipher the genetic regulation of almond tolerance to <i>Diaporthe amygdali</i>. | Catalano C et al. | β | 2025 | β |
| Exploring the evolutionary journey of the lumpy skin disease virus through the phylogenetic and phylo-geo network analysis. | Bayyappa MRG et al. | β | 2025 | β |
| Expression of <i>dnaE2</i> promotes genetic diversity in mycobacterial biofilms. | Salini S et al. | β | 2025 | β |
| Expression profiling, functional characterization, and potential functional variants of the COL7A1 gene in sheep horn development. | Zhang S et al. | β | 2025 | β |
| Extensive Recombination Suppression and Genetic Degeneration of a Young ZW Sex Chromosome System in Halfbeak Fish. | Xing TF et al. | β | 2025 | β |
| Extreme heterochiasmy and high rates of sex-reversed recombination result in large yet homomorphic sex chromosomes in the Emei moustache toad. | Xie S et al. | β | 2025 | β |
| Faster adaptation but slower divergence of X chromosomes under paternal genome elimination. | Baird RB et al. | β | 2025 | β |
| Fast evolutionary turnover and overlapping variances of sex-biased gene expression patterns defy a simple binary sex classification of somatic tissues. | Xie C et al. | β | 2025 | β |
| Fast evolution of SOS-independent multi-drug resistance in bacteria. | Zhang L et al. | β | 2025 | β |
| Feasibility of long-read sequencing to identify molecular alterations in an Indonesian cohort of locally advanced to advanced nasopharyngeal cancer. | Handoko et al. | β | 2025 | β |
| Fine mapping and candidate gene analysis of major QTLs for number of seeds per pod in Arachis hypogaea L. | Li L et al. | β | 2025 | β |
| Fine Mapping Identifies Candidate Genes Associated with Swine Inflammation and Necrosis Syndrome. | Gerhards K et al. | β | 2025 | β |
| Fine Mapping of a Major Locus for Leaf Sheath Hairiness in Wheat Identifies <i>TaSAIN1-4D</i> as a Candidate Gene. | Wu L et al. | β | 2025 | β |
| Fine mapping of a powdery mildew resistance gene PmLF540 from wild emmer wheat. | Liu R et al. | β | 2025 | β |
| First identification of ORF virus causing contagious ecthyma in Morocco (MOR20): Genomic, phylogenetic, and sequence variants analyses for vaccine design. | Elkarhat Z et al. | β | 2025 | β |
| First Report of <i>Candida auris</i> Candidemia in Portugal: Genomic Characterisation and Antifungal Resistance-Associated Genes Analysis. | Miranda IM et al. | β | 2025 | β |
| First report of whole genome sequence of a Mycobacterium bovis (3/86Rv) strain isolated from a cow in India. | Verma R et al. | β | 2025 | β |
| Food sensing controls <i>C. elegans</i> reproductive behavior by neuromodulatory disinhibition. | Chen YC et al. | β | 2025 | β |
| Footprints of Worldwide Adaptation in Structured Populations of Drosophila melanogaster Through the Expanded DEST 2.0 Genomic Resource. | Nunez JCB et al. | β | 2025 | β |
| Forward and reverse genomic screens enhance the understanding of phenotypic variation in a large Chinese rhesus macaque cohort. | Zhang BL et al. | β | 2025 | β |
| Forward genetics in <i>C. elegans</i> reveals genetic adaptations to polyunsaturated fatty acid deficiency. | Kaper D et al. | β | 2025 | β |
| Fraxinus excelsior updated long-read genome reveals the importance of MADS-box genes in tolerance mechanisms against ash dieback. | Franco Ortega S et al. | β | 2025 | β |
| From genotype to phenotype with 1,086 near telomere-to-telomere yeast genomes. | Loegler V et al. | β | 2025 | β |
| From Rare to Common: Genetic Insights into TLR7 Variants in a Multicentric Spanish Study on COVID-19 Severity. | AntolΓ A et al. | β | 2025 | β |
| Functional maps of a genomic locus reveal confinement of an enhancer by its target gene. | Eder M et al. | β | 2025 | β |
| Gene-by-environment interactions modulate the infant gut microbiota in asthma and atopy. | Stickley SA et al. | β | 2025 | β |
| Genetic Analyses, BSA-Seq, and Transcriptome Analyses Reveal Candidate Genes Controlling Leaf Plastochron in Rapeseed (<i>Brassica napus</i> L.). | Qin M et al. | β | 2025 | β |
| Genetic analysis of non-syndromic peg lateralis using whole-exome sequencing. | Choi J et al. | β | 2025 | β |
| Genetic analysis of the single internode dwarf 1 mutant in barley. | Overlander-Chen M et al. | β | 2025 | β |
| Genetic analysis of wild walnuts in Xinjiang based on whole-genome resequencing. | Liu Y et al. | β | 2025 | β |
| Genetic and histological characterization of a dwarf mutant in melon (Cucumis melo L.) reveals potential for breeding semi-dwarf cultivars. | Han Z et al. | β | 2025 | β |
| Genetic architecture of plasma metabolome in 254,825 individuals. | Qiang YX et al. | β | 2025 | β |
| Genetic assessment and Identification of genes related to characterization of Guangdong local goose breeds based on modern and historical genomes. | Zhang X et al. | β | 2025 | β |
| Genetic atlas of plasma metabolome across 40 human common diseases: mapping causal metabolites to disease risk. | Li Y et al. | β | 2025 | β |
| Genetic basis of phenotypic diversity in <i>C. stenophylla</i>: a stepping stone for climate-adapted coffee cultivar development. | Lahai PM et al. | β | 2025 | β |
| Genetic characteristics associated with isolated Microtia revealed through whole exome sequencing of 201 pedigrees. | Wu S et al. | β | 2025 | β |
| Genetic characterization of coronaviruses causing common cold symptoms based on micro-targeted capture sequencing. | Qiao Q et al. | β | 2025 | β |
| Genetic data normalization for genomic medicine: a Fast Healthcare Interoperability Resources Genomics reference implementation. | Dolin RH et al. | β | 2025 | β |
| Genetic design of soybean hosts and bradyrhizobial endosymbionts reduces N<sub>2</sub>O emissions from soybean rhizosphere. | Nishida H et al. | β | 2025 | β |
| Genetic Determinants Associated With the Biofilm Formation Impairment in Pseudomonas aeruginosa Clinical Isolates. | Vvedenskii AV et al. | β | 2025 | β |
| Genetic differentiation and adaptive evolution of buff-tailed bumblebees in Asia. | Su L et al. | β | 2025 | β |
| Genetic Dissection of Frost Tolerance in Winter Durum Wheat: Three Validated KASP Markers for Marker-Assisted Selection. | Divashuk M et al. | β | 2025 | β |
| Genetic diversity analysis and multi-fingerprint map construction of Naematelia aurantialba germplasm resources. | Zeng Y et al. | β | 2025 | β |
| Genetic Diversity and Chromosomal Variations in the Iranian <i>Leishmania major</i> Strain: Insights into Pathogenicity and Drug Resistance. | Sharifian H et al. | β | 2025 | β |
| Genetic Diversity and Core Germplasm Identification in <i>Penaeus japonicus</i> Using Whole-Genome Resequencing. | Zhang D et al. | β | 2025 | β |
| Genetic diversity and fine-scale spatial genetic structure of European beech populations along an elevational gradient. | Grigoriadou Zormpa O et al. | β | 2025 | β |
| Genetic Diversity and Population Structure of Farmed Longfin Batfish (<i>Platax teira</i>) in the South China Sea. | Gao Y et al. | β | 2025 | β |
| Genetic Diversity and Population Structure of <i>Acanthopagrus latus</i> in the South China Sea. | Sun CH et al. | β | 2025 | β |
| Genetic diversity and stress resistance evaluation of Chinese mitten crab (Eriocheir sinensis) genetic resources in the Yangtze River estuary. | Zheng C et al. | β | 2025 | β |
| Genetic Insights into Familial Hypospadias Identifying Rare Variants and Their Potential Role in Urethral Development. | Al-Shafai KN et al. | β | 2025 | β |
| Genetic investigation of sinopulmonary diseases in Vietnam: seeking specific causes from non-specific symptoms. | Phuong PT et al. | β | 2025 | β |
| Genetic pre-adaptations in Saccharomyces cerevisiae Andean chicha isolates facilitate industrial brewery application. | Flores J et al. | β | 2025 | β |
| Genetic profiling of the circulating proteome in common diseases suggests causal proteins and improves risk prediction. | Ma Q et al. | β | 2025 | β |
| Genetic purging in an island-endemic pigeon recovering from the brink of extinction. | Tsujimoto D et al. | β | 2025 | β |
| Genetic Regulation of Alternative Polyadenylation Provides Novel Insights into Molecular Mechanisms Underlying Non-small Cell Lung Cancer. | Jin M et al. | β | 2025 | β |
| Genetic rescue of Florida panthers reduced homozygosity but did not swamp ancestral genotypes. | Aguilar-GΓ³mez D et al. | β | 2025 | β |
| Genetic Resources for Research on the Regulatory Mechanism of Ο-3 Fatty Acids in Oysters. | Li Q et al. | β | 2025 | β |
| Genetics and context for precision health in Greater Boston. | Koyama S et al. | β | 2025 | β |
| Genetic Spectrum of Negative Electroretinograms in a Predominantly Pediatric Cohort of 177 Patients. | Zaslavsky K et al. | β | 2025 | β |
| Genetic traceability, conservation effectiveness, and selection signatures analysis based on ancestral information: a case study of Beijing-You chicken. | Kong Y et al. | β | 2025 | β |
| Genetic variability associates with ancestry, age at disease onset, organ involvement and disease severity in juvenile-onset systemic lupus erythematosus. | Natoli V et al. | β | 2025 | β |
| Genetic Variants in the ATF6 Gene and Their Relationship with Milk-Quality Traits in Yaks. | Ma X et al. | β | 2025 | β |
| Genetic variants of LncRNA associated with splicing regulation and their impact on ovarian cancer development. | Zou L et al. | β | 2025 | β |
| Genome analyses suggest recent speciation and postglacial isolation in the Norwegian lemming. | Lord E et al. | β | 2025 | β |
| Genome architecture evolution in an invasive copepod species complex. | Du Z et al. | β | 2025 | β |
| Genome diversity and signatures of natural selection in mainland Southeast Asia. | He Y et al. | β | 2025 | β |
| Genome organization, virulence genes, and temperature-dependent motility of an emerging pathogen, <i>Escherichia marmotae</i>. | Oladipo PM et al. | β | 2025 | β |
| Genome region aware CADD thresholds for noncoding variant prioritization. | Tenywa JF et al. | β | 2025 | β |
| Genome resequencing and custom genotyping elucidates the origin and dissemination history of an emblematic grapevine cultivar, 'Tempranillo Tinto'. | Tello J et al. | β | 2025 | β |
| Genome restructuring and lineage diversification of Cryptococcus neoformans during chronic infection of human hosts. | Montoya MC et al. | β | 2025 | β |
| Genome sequencing and population genetics provide insights into local adaptation of Opisthopappus species on cliff environments of Taihang Mountains. | Wang Y et al. | β | 2025 | β |
| Genome sequencing and population genomics provide insights into the demographic history, genetic load, and local adaptation of an endangered Tertiary relict. | Lin N et al. | β | 2025 | β |
| Genomes of critically endangered saola are shaped by population structure and purging. | Garcia-Erill G et al. | β | 2025 | β |
| Genome Structural Variants Shape Adaptive Success of an Invasive Urban Malaria Vector Anopheles stephensi. | Samano A et al. | β | 2025 | β |
| Genome-to-genome analysis reveals associations between human and mycobacterial genetic variation in tuberculosis patients from Tanzania. | Xu ZM et al. | β | 2025 | β |
| Genome-Wide Adaptation to a Complex Environmental Gradient in a Keystone Phytoplankton Species. | Pinseel E et al. | β | 2025 | β |
| Genome-wide allele-specific expression in multi-tissue samples from healthy male baboons reveals the transcriptional complexity of mammals. | Ramasamy R et al. | β | 2025 | β |
| Genome-wide analysis of genetic diversity in Anopheles darlingi from RondΓ΄nia State, Brazil. | Moss S et al. | β | 2025 | β |
| Genome-wide analysis of Udai21: Unraveling the genetic basis of superior eating quality in rice. | Ikeda H et al. | β | 2025 | β |
| Genome-wide association mapping dissects the selective breeding of determinacy and photoperiod sensitivity in common bean (Phaseolus vulgaris L.). | Denning-James KE et al. | β | 2025 | β |
| Genome-wide association studies reveal genetic diversity and regulatory loci underlying dwarfing traits in banana. | Li Y et al. | β | 2025 | β |
| Genome-wide association studies unveil candidate genes linked with fruit fiber traits in Calotropis procera. | Gadri HS et al. | β | 2025 | β |
| Genome-wide association study analysis of single nucleotide variants in <i>L. infantum</i> associated with IL-6 inflammatory response in visceral leishmaniasis. | da Silva AM et al. | β | 2025 | β |
| Genome-wide association study and BSR-seq identify nitrate reductase-related genes in rice landraces (Oryza sativa L.). | Luo S et al. | β | 2025 | β |
| Genome-Wide Association Study for Weight-Related Traits in <i>Scylla paramamosain</i> Using Whole-Genome Resequencing. | Chen L et al. | β | 2025 | β |
| Genome-wide association study identifies candidate genes affecting major traits of Ziwuling black goat. | Zhou C et al. | β | 2025 | β |
| Genome-Wide Association Study of Age-Related Hearing Loss in CFW Mice Identifies Multiple Genes and Loci, Including Prkag2. | Polesskaya O et al. | β | 2025 | β |
| Genome-wide association study of a Guinea grass (Megathyrsus maximus) diversity panel reveals the genetic basis of agronomic and nutritional traits. | LΓ³pez-Contreras LM et al. | β | 2025 | β |
| Genome-Wide Association Study of Immune Indices in Yaks. | Yu D et al. | β | 2025 | β |
| Genome-wide association study reveals novel loci associated with body size and carcass yields in Shaoxing ducks. | Xu W et al. | β | 2025 | β |
| Genome-wide enhancer-gene regulatory maps of liver reveal novel regulatory mechanisms underlying NAFLD pathogenesis. | Li R et al. | β | 2025 | β |
| Genome-wide Genetic Mutations Accumulated in Pigs Genome-edited for Xenotransplantation and Their Filial Generation. | Huo ιε¦δΊ X et al. | β | 2025 | β |
| Genome-Wide, High-Density Genotyping Approaches for Plant Germplasm Characterisation (Methods and Applications). | Werghi S et al. | β | 2025 | β |
| Genome-wide identification and association analysis of informative SNPs of various nutri-nutraceutical traits in Buckwheat (<i>Fagopyrum</i> spp.). | Manzoor M et al. | β | 2025 | β |
| Genome-wide Parallelism Underlies Rapid Freshwater Adaptation Fueled by Standing Genetic Variation in a Wild Fish. | Yang H et al. | β | 2025 | β |
| Genome wide population genetics and molecular surveillance of insecticide resistance in Anopheles stephensi mosquitoes from Awash Sebat Kilo in Ethiopia. | Acford-Palmer H et al. | β | 2025 | β |
| Genome-wide screen uncovers novel host factors for L-A virus maintenance and a potential mutualistic-symbiosis relationship in yeast. | Hsiao WY et al. | β | 2025 | β |
| Genome-Wide SNP Analysis Reveals Population Structure and Genetic Diversity in <i>Lycium ruthenicum</i> Murr. | Yang R et al. | β | 2025 | β |
| Genome-wide study links cardiometabolic factors to cognition via APOA4-APOA5-ZPR1-BUD13 and other loci in rural Indians. | Chakraborty S et al. | β | 2025 | β |
| Genomic analysis association of tolerance to heat stress in subtropical Egyptian goats Raised in hot dry environment. | Aboul-Naga AM et al. | β | 2025 | β |
| Genomic analysis of Dasiphora on the Qinghai-Tibet Plateau provides insights into genetic divergence and flower color variation. | Tian Z et al. | β | 2025 | β |
| Genomic analysis of <i>Companilactobacillus musae</i> zy130 isolated from corn silage reveals its potential as a superior silage inoculant. | Ma J et al. | β | 2025 | β |
| Genomic analysis of xerophyte Salweenia species provides insights into the alpine dry-warm valleys divergence and survival history. | Liao M et al. | β | 2025 | β |
| Genomic and genetic insights into Mendel's pea genes. | Feng C et al. | β | 2025 | β |
| Genomic and population genomic analyses reveal contrasting diversity and demographic histories in a critically endangered and a widespread <i>Oreocharis</i> species. | Peng N et al. | β | 2025 | β |
| Genomic and transcriptomic landscapes of metastatic neuroendocrine neoplasms from distinct primary sites and their clinical implications. | Wee K et al. | β | 2025 | β |
| Genomic architecture of purebred and crossbred Moghani lambs with Texel and Booroola sheep. | Talebi R et al. | β | 2025 | β |
| Genomic Ascertainment of CHEK2-Related Cancer Predisposition. | Kim SY et al. | β | 2025 | β |
| Genomic assembly and resequencing of the mango seed weevil Sternochetus mangiferae (Fabricius) provide insights into host adaptation and invasion control. | Zhang L et al. | β | 2025 | β |
| Genomic-based revelation of genetic structure and adaptive characterization of Schizopygopsis malacanthus in the Jinsha River and Yalong River. | Yan T et al. | β | 2025 | β |
| Genomic characterisation of recurrent Mycobacterium avium isolates from chronically infected patients reveals patterns of within-host evolution. | Walsh AM et al. | β | 2025 | β |
| Genomic characterization of eight novel Bartonella species from bats and ectoparasites reveals phylogenetic diversity and host adaptation. | Wang WJ et al. | β | 2025 | β |
| Genomic characterization of host gene alterations in Theileria annulata-transformed leukocytes. | Dandasena D et al. | β | 2025 | β |
| Genomic characterization of XDR Mycobacterium tuberculosis isolates in Argentina (2006-2015). | Castello FA et al. | β | 2025 | β |
| Genomic data reveal a north-south split and introgression history of blood fluke populations across Africa. | Platt Ii RN et al. | β | 2025 | β |
| Genomic differentiation between wild and domesticated populations of large yellow croaker (Larimichthys crocea): environmental impacts. | Jiang L et al. | β | 2025 | β |
| Genomic Drivers of Biofilm Formation in <i>Salmonella</i> Enteritidis and <i>S</i>. Kentucky from Poultry Production. | Zhang J et al. | β | 2025 | β |
| Genomic Drivers of Pyrethroid Resistance Escalation in the Malaria Vector Anopheles funestus Across Africa. | Gadji M et al. | β | 2025 | β |
| Genomic epidemiology of mpox virus during the 2022 outbreak in New York City. | Akther S et al. | β | 2025 | β |
| Genomic Evaluation of Assisted Gene Flow Options in an Endangered Rattlesnake. | Mathur S et al. | β | 2025 | β |
| Genomic evidence for low genetic diversity but purging of strong deleterious variants in snow leopards. | Yang L et al. | β | 2025 | β |
| Genomic evidence unveils the genetic architecture and evolution of the S-locus controlling heterostyly in Rubiaceae. | Yuan S et al. | β | 2025 | β |
| Genomic evolution and stability of the mcr-1-harboring IncI2 plasmid in the presence and absence of colistin. | Shen C et al. | β | 2025 | β |
| Genomic insights into adaptive evolution of Island brown rats (Rattus norvegicus): evidence from Iturup Island in the Russian Far East. | Liu N et al. | β | 2025 | β |
| Genomic insights into clonal diversity in UK populations of the potato aphid, Macrosiphum euphorbiae. | Whitehead M et al. | β | 2025 | β |
| Genomic Insights Into Early-Stage Selective Filtering During the Transport Stage of Biological Invasions. | Chen Y et al. | β | 2025 | β |
| Genomic Insights into Genetic Diversity and Adaptation of Nanyang Cattle: Implications for Conservation and Breeding. | Zhang Y et al. | β | 2025 | β |
| Genomic insights into genome-wide heterozygosity and its impact on walnut adaptive evolution and improvement. | Chen M et al. | β | 2025 | β |
| Genomic Insights into <i>Neofusicoccum laricinum</i>: The Pathogen Behind Chinese Larch Shoot Blight. | Pan J et al. | β | 2025 | β |
| Genomic insights into the convergent evolution of desert adaptation in camels and antelopes. | Zhou J et al. | β | 2025 | β |
| Genomic insights into the demographic history and local adaptation of wild boars across Eurasia. | Wang Z et al. | β | 2025 | β |
| Genomic insights into the divergence between hulled and hulless oats. | Li W et al. | β | 2025 | β |
| Genomic insights into the genetic basis of the seed size and weight revealed by the Chinese peanut key landraces. | Wang J et al. | β | 2025 | β |
| Genomic insights into the virulence repertoire and hemibiotrophic lifestyle of the grapevine black rot pathogen Phyllosticta ampelicida. | Colombo M et al. | β | 2025 | β |
| Genomic introgression underlies environmental adaptation in three species of Chinese wingnuts, <i>Pterocarya</i>. | Geng θΏζΉδΈ F et al. | β | 2025 | β |
| Genomic landscape of a long-term surviving patient with metastatic cancer of the larynx: a case report. | BiΕ‘of V et al. | β | 2025 | β |
| Genomic landscape of diffuse glioma revealed by whole genome sequencing. | Kinnersley B et al. | β | 2025 | β |
| Genomic pathogenic alterations in the SWI/SNF complex compromise the outcomes of immunotherapy in Chinese patients with KRAS-mutant NSCLC by downregulating STING expression. | Gao L et al. | β | 2025 | β |
| Genomic Prediction for Growth-Related Traits in Golden Pompano (<i>Trachinotus ovatus</i>). | Sun H et al. | β | 2025 | β |
| Genomic Profiles of Pathogenic and Moderate-Penetrance Germline Variants Associated With Risk of Early-Onset Lung Adenocarcinoma. | Cho H et al. | β | 2025 | β |
| Genomic Profiling Reveals Clinically Relevant Antimicrobial Resistance and Virulence Genes in <i>Klebsiella pneumoniae</i> from Hong Kong Wet Markets. | Ngan WY et al. | β | 2025 | β |
| Genomic resequencing reveals genetic diversity, population structure, and core collection of durian germplasm. | Zhong Y et al. | β | 2025 | β |
| Genomic resequencing unravels species differentiation and polyploid origins in the aquatic plant genus Trapa. | Fan X et al. | β | 2025 | β |
| Genomic resources for Australian alfalfa (Medicago sativa L.) genomics: reformatted reference genome, annotated variants, gene presence-absence and diversity analysis from genome re-sequencing. | Malmberg MM et al. | β | 2025 | β |
| Genomic Signatures and Demographic History of the Widespread and Critically Endangered Yellow-Breasted Bunting. | Chen G et al. | β | 2025 | β |
| Genomic Signatures in Maned Three-Toed Sloths From Ancient to Recent Environmental Changes in Brazil's Threatened Atlantic Forest. | Arantes LS et al. | β | 2025 | β |
| Genomic signatures of subterranean lifestyle and ecological adaptation in Myospalax. | Wan N et al. | β | 2025 | β |
| Genomic structure and life history variation of isofemale lineages of Myzus persicae with different levels of parasitization by Diaeretiella rapae. | Gomes MP et al. | β | 2025 | β |
| Genomic Surveillance of <i>Plasmodium falciparum</i> Drug Resistance Markers Between October 2021 and June 2023 in Kigali, Rwanda. | Fankem SN et al. | β | 2025 | β |
| Genomic surveillance of vancomycin-resistant Enterococcus faecium: a study on Resistome, Plasmidome, and mobilome profiling. | Mathpal S et al. | β | 2025 | β |
| Genomic vulnerability assessment reveals the potential benefits of adaptive introgression by mitigating the maladaptive risk of admixed populations. | Li WH et al. | β | 2025 | β |
| Genomic-Wide Association Markers and Candidate Genes for the High-Protein Trait in Storage Roots of Cassava (<i>Manihot esculenta</i>). | Wang D et al. | β | 2025 | β |
| Geographic Divergence and Putative Candidate Gene Discovery of Rice Grain Quality in China. | Wang F et al. | β | 2025 | β |
| Germline Multigene Panel Testing in Japanese Patients with Pheochromocytoma and Paraganglioma: Technical Feasibility and Clinical Utility. | Yonamine M et al. | β | 2025 | β |
| Germline mutation profiling of breast cancer patients using a non-BRCA sequencing panel. | Panigoro SS et al. | β | 2025 | β |
| Germline pathogenic variants in HIC1 DNA binding domains are associated with familial serrated polyposis syndrome. | DomΓnguez-Rovira X et al. | β | 2025 | β |
| Germline rare variants in cancer susceptibility genes and subsequent neoplasm risk after childhood cancer. | Zamani SA et al. | β | 2025 | β |
| Germline Variant Call Accuracy in Whole Genome Sequence Data from Canine Formalin-Fixed Paraffin-Embedded Tissue Samples. | Jagannathan V et al. | β | 2025 | β |
| Germline variants of the POLH and RAD51 genes are candidate variants associated with risk of hormone receptor-negative young-onset breast cancer. | Yazaki S et al. | β | 2025 | β |
| Glial-to-mesenchymal transition of tumor Schwann cells drives the genetic burden in MPNSTs from neurofibromatosis type 1 mouse model. | Radomska KJ et al. | β | 2025 | β |
| Glioblastoma resistance to EGFR antibody-drug conjugate is driven by transcriptional reprogramming and TEK-induced EGFR suppression. | Blomquist MR et al. | β | 2025 | β |
| Global Stress Responses Identify the Functionally Divergent Regulators Required for <i>Candida auris</i> Commensalism and Pathogenicity. | Xu C et al. | β | 2025 | β |
| Graph-based pangenomes and pan-phenome provide a cornerstone for eggplant biology and breeding. | Gaccione L et al. | β | 2025 | β |
| GWAS for QTLs associated with agronomic traits in Chickpea (Cicer arietinum L.) harvested in South-East Kazakhstan. | Zatybekov A et al. | β | 2025 | β |
| GWAS Reveals Key Candidate Genes Associated with Milk-Production in Saanen Goats. | Li F et al. | β | 2025 | β |
| Hairpin loop to hairpin loop: a full-length assembly of the ASFV genome using Oxford Nanopore long-read sequencing. | Phadphon P et al. | β | 2025 | β |
| Heritability and genomic basis of age-at-maturity in Chinook Salmon. | Willis SC et al. | β | 2025 | β |
| Heterogeneous <i>Salmonella</i> typhi transmission within a household: genomic insights from a chronic carrier. | Hussain R et al. | β | 2025 | β |
| High-density SNP-based linkage map construction and QTL analysis for growth-related traits in <i>Luciobarbus brachycephalus</i> using whole-genome resequencing data. | Wang X et al. | β | 2025 | β |
| High Gene Expression Predicts Extremely Low Segregation of Deleterious Mutations in Large Penguin Populations. | Trucchi E et al. | β | 2025 | β |
| Highly conserved Plasmodium vivax genomes in Duffy-negative individuals from Sudan. | Schroeder RE et al. | β | 2025 | β |
| High-quality reference genome and population analysis of allotetraploid Elymus sibiricus provide insight into genome origin and environmental adaptations to the Qinghai-Tibetan Plateau. | Li X et al. | β | 2025 | β |
| Host-Adaptive Divergence Shapes the Genetic Architecture of <i>Magnaporthe oryzae</i> in Southern China's Rice Agroecosystems. | Liu X et al. | β | 2025 | β |
| Host range expansion of asexual parasite can be explained by loss of adaptions in Muller's Ratchet. | Tichkule S et al. | β | 2025 | β |
| Hotspot gene conversion between FKS1 and FKS2 in echinocandin resistant Candida glabrata serial isolates. | Zajac C et al. | β | 2025 | β |
| HSP90 as an evolutionary capacitor drives adaptive eye size reduction via atonal. | Sayed R et al. | β | 2025 | β |
| Human MAPT knockin mouse models of frontotemporal dementia for the neurodegenerative research community. | Morito T et al. | β | 2025 | β |
| Humpback whale genomes reflect the increased efficiency of commercial whaling. | Furni F et al. | β | 2025 | β |
| Hybridization Drives Trait Integration in Telomere-To-Telomere Apocynum Genomes. | Xu P et al. | β | 2025 | β |
| Hybrid Origin of Alpaca (Vicugna pacos) During Domestication of Camelids in the Mid-Holocene. | Wang Z et al. | β | 2025 | β |
| Identification of bioinformatic pipelines for virus monitoring using nanopore sequence data: A systematic assessment. | Kaiser NL et al. | β | 2025 | β |
| Identification of candidate cardiomyopathy modifier genes through genome sequencing and RNA profiling. | Lindholm ME et al. | β | 2025 | β |
| Identification of candidate gene controlling TSSL via BSA-seq and fine mapping and germplasm innovation in rice. | Dang X et al. | β | 2025 | β |
| Identification of candidate genes for watermelon (<i>Citrullus lanatus</i>) seed weight trait by BSA-seq. | Sun R et al. | β | 2025 | β |
| Identification of Differentially Expressed Genes and SNPs Linked to <i>Vibrio mimicus</i> Resistance in Yellow Catfish (<i>Pelteobagrus fulvidraco</i>). | Tong W et al. | β | 2025 | β |
| Identification of Expression Quantitative Trait Loci (eQTL) for Adipose-Specific Regulatory Mechanisms in Hanwoo (Korean Cattle). | Lee J et al. | β | 2025 | β |
| Identification of malignant cells in single-cell transcriptomics data. | Andreatta M et al. | β | 2025 | β |
| Identification of modifier gene variants overrepresented in familial hypomagnesemia with hypercalciuria and nephrocalcinosis patients with a more aggressive renal phenotype. | Vall-Palomar M et al. | β | 2025 | β |
| Identification of novel genetic mutations for the treatment prognostication of canine lymphoma. | Tsang J et al. | β | 2025 | β |
| Identification of novel TCOF1 mutations in Treacher Collins syndrome and their functional characterization. | Chen Y et al. | β | 2025 | β |
| Identification of the putative regulatory regions and candidate genes associated with backfat thickness and intramuscular fat content traits in Xiang pigs. | Chen X et al. | β | 2025 | β |
| Identification of variants from gene expression data of opioid-addicted patients. | Ajmeriya S et al. | β | 2025 | β |
| Identification of Ξ±-Azacyclic Acetamide-Based Inhibitors of <i>P. falciparum</i> Na<sup>+</sup> Pump (<i>Pf</i>ATP4) with Fast-Killing Asexual Blood-Stage Antimalarial Activity by Phenotypic Screening. | Casas A et al. | β | 2025 | β |
| Identifying functional roles and pathways of shared mutations in canine solid tumors by whole-genome sequencing. | Jeon Y et al. | β | 2025 | β |
| Identifying Genetic Variants in Patients With Cefaclor-Induced Anaphylaxis Using Human Leukocyte Antigen Typing and Whole-Exome Sequencing. | Kim SR et al. | β | 2025 | β |
| Identifying New Loci and Genes Associated with Feed Efficiency in Broilers. | Luo N et al. | β | 2025 | β |
| Identifying potential genetic biomarkers for sperm dysfunction through whole-genome sequencing. | Khan MR et al. | β | 2025 | β |
| Impact of germline variants on breast and ovarian cancer risk in Japanese women: an original cohort study and meta-analysis. | Yazaki S et al. | β | 2025 | β |
| Importance of Clinical, Laboratory, and Genetic Risk Factors for Incident CAD. | Bhattacharya R et al. | β | 2025 | β |
| Increased heterozygosity and balancing selection in isofemale generations of Anopheles stephensi under laboratory conditions. | Mohanty AK et al. | β | 2025 | β |
| Increasing pathogenic germline variant diagnosis rates in precision medicine: current best practices and future opportunities. | Dukda S et al. | β | 2025 | β |
| InDels in an intronic region of gene Ccsmd04 coding for dormancy/auxin-associated protein control sterility mosaic disease resistance in pigeonpea. | Rangari SK et al. | β | 2025 | β |
| In-depth investigation of genome to refine QTL positions for spontaneous sex-reversal in XX rainbow trout. | Dehaullon A et al. | β | 2025 | β |
| Indian Himalayan Arabidopsis thaliana population reflects deep history and might be the source of species expansion in the eastern edge. | Singh A et al. | β | 2025 | β |
| Induced somatic mutation accumulation during skeletal muscle regeneration reduces muscle strength. | VrtaΔnik P et al. | β | 2025 | β |
| Inflammation-like environments limit the loss of quorum sensing in <i>Pseudomonas aeruginosa</i>. | Fu T et al. | β | 2025 | β |
| Inner-mitochondrial membrane protein PfMPV17 is linked to P. falciparum in vitro resistance to the indoloquinolizidine alkaloid alstonine. | Macdonald JR et al. | β | 2025 | β |
| Innovative screening for mutants affected in seed oil/protein allocation identifies TRANSPARENT TESTA7 as a regulator of oil accumulation. | LΓ©cureuil A et al. | β | 2025 | β |
| Insight into the genetic underpinnings of tobacco hairy root formation by variant-associated genes based on whole-genome resequencing. | Wu X et al. | β | 2025 | β |
| Insights into genetic heterogeneity and drug resistance in Leishmania donovani of the Indian sub-continent from genomic data. | Verma A et al. | β | 2025 | β |
| Integrated chloroplast genomics and whole-genome resequencing reveals demographic history and selection signatures of black walnuts. | Ye H et al. | β | 2025 | β |
| Integrated genomic and transcriptomic analyses reveal the genetic and molecular mechanisms underlying hawthorn peel color and seed hardness diversity. | Meng J et al. | β | 2025 | β |
| Integrated QTL mapping and candidate gene analysis for yield-related traits and salt tolerance in a rice RIL population. | Zhang Y et al. | β | 2025 | β |
| Integrating Dense Genotyping with High-Throughput Phenotyping Empowers the Genetic Dissection of Berry Quality and Resilience Traits in Grapevine. | Zhang Y et al. | β | 2025 | β |
| Integrating eQTL and genome-wide association studies to uncover additive and dominant regulatory circuits in pig uterine capacity. | Xu Z et al. | β | 2025 | β |
| Integrating genome assembly, structural variation map construction and GWAS reveal the impact of SVs on agronomic traits of Brassica napus. | Wang N et al. | β | 2025 | β |
| Integrating host-pathogen interaction genomics to boost wheat defense against septoria tritici blotch. | DomΓnguez-RondΓ³n A et al. | β | 2025 | β |
| Integrating Multi-omics Analysis to Decipher the Genetic Basis of Heterosis in Xieyou9308. | Lin F et al. | β | 2025 | β |
| Integrating population genomics and environmental data to predict adaptation to climate change in post-bottleneck Tibetan macaques. | Teng Y et al. | β | 2025 | β |
| Integrating whole genome and transcriptome sequencing to characterize the genetic architecture of isoform variation. | Liu C et al. | β | 2025 | β |
| Integration of germline pharmacogenomic burden to predict fluoropyrimidine-related toxicity - A secondary analysis of the PREPARE trial. | De Mattia E et al. | β | 2025 | β |
| Integration of QTL mapping and GWAS reveals the complicated genetic architecture of chemical composition traits in tobacco leaves. | Ullah A et al. | β | 2025 | β |
| Integrative Genomics and Multi-Tissue Transcriptomics Identify Key Loci and Pathways for Hypoxia Tolerance in Grass Carp. | Wang W et al. | β | 2025 | β |
| Integrative Genotyping and Analysis of Canine Structural Variation Using Long-read and Short-read Data. | Schall PZ et al. | β | 2025 | β |
| Integrative multi-omics and computer-aided biofungicide design approach to combat fusarium wilt of chickpea. | Sahoo R et al. | β | 2025 | β |
| Integrative Neoepitope Discovery in Glioblastoma via HLA Class I Profiling and AlphaFold2-Multimer. | FrancΓ©s R et al. | β | 2025 | β |
| Interactions between the genome and the nuclear lamina are multivalent and cooperative. | Dauban L et al. | β | 2025 | β |
| Inter-host diversity associated with age, sex, and menstrual cycle modulates clinical manifestations in DENV-2 patients. | Khare K et al. | β | 2025 | β |
| Introgression dynamics of sex-linked chromosomal inversions shape the Malawi cichlid radiation. | Blumer LM et al. | β | 2025 | β |
| Investigating the "Dark" Genome: First Report of Partington Syndrome in Cyprus. | Aristidou C et al. | β | 2025 | β |
| Investigating the effects of chimerism on the inference of selection: quantifying genomic targets of purifying, positive, and balancing selection in common marmosets (Callithrix jacchus). | Soni V et al. | β | 2025 | β |
| Ionome profiling discriminate genotype-dependent responses to drought in durum wheat. | Quagliata G et al. | β | 2025 | β |
| Isoform analysis of heterozygous putative splicing variants at the allele level using nanopore long-read sequencing. | Ozaki K et al. | β | 2025 | β |
| Isolating selective from non-selective forces using site frequency ratios. | Hey J et al. | β | 2025 | β |
| JG2: an updated version of the Japanese population-specific reference genome. | Sriwichaiin S et al. | β | 2025 | β |
| Kazakh Tobet dogs in the genomic landscape: refining the history of livestock guardian breeds. | Perfilyeva A et al. | β | 2025 | β |
| K-rice: a comprehensive database of Korean rice germplasm variants. | Kim JG et al. | β | 2025 | β |
| Large DNA and protein language models enhance discovery of deleterious mutations in maize. | Wang Y et al. | β | 2025 | β |
| Latitude-driven adaptive evolution of body length in diverse pig breeds across China. | Wang Y et al. | β | 2025 | β |
| Lepidopteran Genomes Have Denser Transposable Elements in Smaller Chromosomes, Likely Driven by Non-allelic Homologous Recombination. | An H et al. | β | 2025 | β |
| Leveraging large language models to predict antibiotic resistance in Mycobacterium tuberculosis. | Testagrose C et al. | β | 2025 | β |
| Linking Measures of Inbreeding and Genetic Load to Demographic Histories Across Three Species of Bears. | Clendenin HR et al. | β | 2025 | β |
| LIPID RICH 1 modulates allocation of carbon between starch and triacylglycerol in Arabidopsis leaves. | Yamaguchi M et al. | β | 2025 | β |
| LMF1 frameshift deletion in Franches-Montagnes horses with hypertriglyceridemia-induced pancreatitis. | DrΓΆgemΓΌller M et al. | β | 2025 | β |
| Local adaptation to climate has facilitated the global invasion of cheatgrass. | Gamba D et al. | β | 2025 | β |
| Local Climate Adaptation in Chinese Indigenous Pig Genomes. | Liu Y et al. | β | 2025 | β |
| Long-read sequencing reveals genomic and epigenomic variation in the dark genome of human Alzheimer's disease. | Ramirez P et al. | β | 2025 | β |
| Long-read structural variant discovery and targeted short read genotyping enables population scale characterization of structural variation in rhesus macaques. | Ray K et al. | β | 2025 | β |
| Long-term culturing of <i>Pseudomonas aeruginosa</i> in static, minimal nutrient medium results in increased pyocyanin production, reduced biofilm production, and loss of motility. | Cecil RE et al. | β | 2025 | β |
| Low T cell diversity associates with poor outcome in bladder cancer: A comprehensive longitudinal analysis of the T cell receptor repertoire. | KjΓ¦r A et al. | β | 2025 | β |
| <i>Coccidioides</i> genomes from low-incidence states reveal complex migration history across the western United States. | Fonseca EM et al. | β | 2025 | β |
| <i>RAB24</i> Missense Variant in Dogs with Cerebellar Ataxia. | Schwarz C et al. | β | 2025 | β |
| <i>TP53</i> mutation and immunohistochemical p53 expression characteristics in diffuse large B-cell lymphoma. | Jin Y et al. | β | 2025 | β |
| Machine learning-based prediction of antimicrobial resistance and identification of AMR-related SNPs in Mycobacterium tuberculosis. | Xu Y et al. | β | 2025 | β |
| Mac-/Lactosylceramide regulates intestinal homeostasis and secretory cell fate commitment by facilitating Notch signaling. | Tang K et al. | β | 2025 | β |
| Macrovascular tumor infiltration and circulating tumor cell cluster dynamics in patients with cancer approaching the end of life. | Newcomer K et al. | β | 2025 | β |
| Manipulating alternative end-joining alters carbon-ion beam-induced genome mutation profiles in Arabidopsis thaliana. | Long J et al. | β | 2025 | β |
| Mapping multitissue regulatory variants reveals a liver-centric coexpression network associated with duck egg-laying performance. | Xi Y et al. | β | 2025 | β |
| Mapping QTLs for PHS resistance and development of a deep learning model to measure PHS rate in japonica rice. | Jun S et al. | β | 2025 | β |
| Mapping the regulatory genetic landscape of complex traits using a chicken advanced intercross line. | Zhu X et al. | β | 2025 | β |
| Mechanism of Tumor Budding in Patient-Derived Metachronous Oral Primary Squamous Cell Carcinoma Cell Lines. | Omae T et al. | β | 2025 | β |
| Mechanisms of Cefiderocol Resistance in Carbapenemase-Producing Enterobacterales: Insights from Comparative Genomics. | Tristancho-BarΓ³ A et al. | β | 2025 | β |
| Meropenem-induced cross-protection in Salmonella enterica resistant variants: Insights from adaptive laboratory evolution and whole genome sequencing. | Tavares da Silva R et al. | β | 2025 | β |
| Microbiome composition shapes temperature tolerance in a Hawaiian picture-winged Drosophila. | Price DK et al. | β | 2025 | β |
| Mining sorghum pangenome enabled identification of new dw3 alleles for breeding stable-dwarfing hybrids. | Marla SR et al. | β | 2025 | β |
| Molecular analysis of the evolutionary history of endometrial and ovarian carcinoma in Lynch syndrome. | Kauppinen AK et al. | β | 2025 | β |
| Molecular determinants of sotorasib clinical efficacy in KRAS<sup>G12C</sup>-mutated non-small-cell lung cancer. | Skoulidis F et al. | β | 2025 | β |
| Molecular Genetic Basis of Reproductive Fitness in Tibetan Sheep on the Qinghai-Tibet Plateau. | Zheng W et al. | β | 2025 | β |
| Molecular signals associated with intraperitoneal chemotherapy resistance in gastric cancer with peritoneal metastasis through PIPS GC trial integrated translational research. | Seo WJ et al. | β | 2025 | β |
| Monitoring ctDNA in aggressive B-cell lymphoma: a prospective correlative study of ctDNA kinetics and PET-CT metrics. | Vimalathas G et al. | β | 2025 | β |
| Mosaic variants of neurodevelopmental and mitochondrial genes in postmortem paraventricular thalamus in bipolar disorder detected by deep exome sequencing. | Nishioka M et al. | β | 2025 | β |
| Multidrug resistant hypervirulent ST307 clone from genomic surveillance of extended spectrum beta-lactamase-producing Klebsiella pneumoniae species complex in East Africa. | Kidenya BR et al. | β | 2025 | β |
| Multifaceted disruption of AMPA receptor signaling by <i>CACNG8</i> variants: Integrated evidence from human genetics and molecular simulation. | Alibrandi S et al. | β | 2025 | β |
| Multi-layer stratified oncology platform utilizing transcriptomics, prostate cancer organoids, and modeling of drug response. | Kang J et al. | β | 2025 | β |
| Multi-locus genome-wide association studies reveal genomic regions associated with sodicity tolerance in rice. | Akilan M et al. | β | 2025 | β |
| Multi-marker GWAS and variant-specific genomic prediction for growth traits in Pacific white shrimp. | Lv T et al. | β | 2025 | β |
| Multi-Omic Analysis of Bacteriophage-Insensitive Mutants Reveals a Putative Role for the Rcs Two-Component Phosphorelay System in Phage Resistance Development in <i>Erwinia amylovora</i>. | Ibrahim N et al. | β | 2025 | β |
| Multi-omics whole-genome characterization of the copy number landscape of metastatic pancreatic ductal adenocarcinoma. | Topham JT et al. | β | 2025 | β |
| Multiple genome analysis of Staphylococcus aureus from wild ungulates renders new insights into the links between genetic diversity and biofilm formation. | Teixeira S et al. | β | 2025 | β |
| Multiple Lignocellulosic Inhibitor-Tolerant <i>Saccharomyces cerevisiae</i> Strains Developed by Evolutionary Engineering and CRISPR/Cas9 Gene Editing Technology. | Chen G et al. | β | 2025 | β |
| Multiplex long-amplicon sequencing for comprehensive molecular surveillance of Plasmodium falciparum resistance to artemisinin and partner drugs in artemisinin-based combination therapies (ACTs). | Li F et al. | β | 2025 | β |
| Mutagenesis of Highland barley (Hordeum vulgare L. Var. nudum) using nitrogen ion beam implantation: screening of phenotypic Var.ations and comparative transcriptome analysis. | Yu HY et al. | β | 2025 | β |
| Mutational landscape and risk estimates of DDR genes in Chinese ovarian cancer patients. | Zhang C et al. | β | 2025 | β |
| Mutation- and Transcription-Driven Omic Burden of Daptomycin/Dalbavancin-R and Glycopeptide-RS Fitness Costs in High-Risk MRSA: A Nexus in Antimicrobial Resistance Mechanisms-Genome Proneness-Compensatory Adaptations. | Chines E et al. | β | 2025 | β |
| Mutation in maize chloroplastic polypeptide chain release factor (ZmcpRF1) affects chloroplast development and leaf color. | Chen H et al. | β | 2025 | β |
| Mutations in the floral regulator gene HUA2 restore flowering to the Arabidopsis trehalose 6-phosphate synthase1 (tps1) mutant. | Zeng L et al. | β | 2025 | β |
| Nanopore sequencing and hybrid assembly: unraveling the genomic landscape of dollar spot with enhanced annotation and drug resistance profiling. | Shi X et al. | β | 2025 | β |
| Nanopore sequencing in veterinary medicine: from concepts to clinical applications. | Chaves M et al. | β | 2025 | β |
| Natural variation of the streptococcal group A carbohydrate biosynthesis genes impacts host-pathogen interaction. | Schipper K et al. | β | 2025 | β |
| Neo-adjuvant pembrolizumab in stage IV high-grade serous ovarian cancer: the phase II Neo-Pembro trial. | Aronson SL et al. | β | 2025 | β |
| Neoantigen load as a predictor of relapse in early-stage NSCLC: features that agonise and antagonise prognosis. | Ye L et al. | β | 2025 | β |
| New genetic diagnoses for inherited retinal dystrophies by integrating splicing tools into NGS pipelines. | FernΓ‘ndez-SuΓ‘rez E et al. | β | 2025 | β |
| New QTLs involved in the control of stigma position in tomato. | Riccini A et al. | β | 2025 | β |
| New T2T assembly of Cryptosporidium parvum IOWA II annotated with Legacy-Compatible Gene identifiers. | Baptista RP et al. | β | 2025 | β |
| Next generation DNA sequencing data analysis and its application in clinical genomics. | Beura A et al. | β | 2025 | β |
| Non-Random Distribution of EMS-Induced Mutations Reveals Preference for Open Chromatin and Expressed Genes in Rice. | Yao XF et al. | β | 2025 | β |
| Non-truncating BMPR1A variants associated with familial colorectal cancer and adenomatous polyps. | Nieminen TT et al. | β | 2025 | β |
| Norovirus genomes detected from the Guillain-BarrΓ© syndrome (GBS) cases in a community outbreak in Pune, India, 2025. | Lavania M et al. | β | 2025 | β |
| Novel genetic associations with childhood adipocytokines in Indian adolescents. | Nair JM et al. | β | 2025 | β |
| Novel Grm6 Variant in a no b-wave (nob) Mouse Model: Phenotype Characterization and Gene Therapy. | Lin PH et al. | β | 2025 | β |
| Novel insecticide resistance mutations associated with variable PBO synergy in Anopheles gambiae s.l. from the Democratic Republic of Congo. | Pelloquin B et al. | β | 2025 | β |
| Novel perpetual genetic population development and genome assembly of superior maize inbred lines provide insights into genetic improvement. | Xue Y et al. | β | 2025 | β |
| Onkopus: precise interpretation and prioritization of sequence variants for biomedical research and precision medicine. | Kurz NS et al. | β | 2025 | β |
| Optimized lentiviral backbone induces robust and diverse T cell immunity against neoantigens to counteract tumor heterogeneity. | Vesin B et al. | β | 2025 | β |
| Organoid morphology-guided classification for oral cancer reveals prognosis. | Lee MR et al. | β | 2025 | β |
| Over-expression and increased copy numbers of a cytochrome P450 and two UDP-glucuronosyltransferase genes in macrocyclic lactone resistant Psoroptes ovis of cattle. | Hearn J et al. | β | 2025 | β |
| Pan-cancer prevalence, risk, and clinical and demographic characteristics of Lynch Syndrome-associated variants in BioBank Japan. | Mizukami K et al. | β | 2025 | β |
| Pangenome analysis reveals structural variation associated with seed size and weight traits in peanut. | Zhao K et al. | β | 2025 | β |
| Papillary Thyroid Carcinoma With 5 Unique Point Mutations and Typical Behavior. | Chauhan A et al. | β | 2025 | β |
| Partner dependency alters patterns of coevolutionary selection in mutualisms. | Vidal MC et al. | β | 2025 | β |
| Pasteurized Milk Serves as a Passive Surveillance Tool for Highly Pathogenic Avian Influenza Virus in Dairy Cattle. | Gontu A et al. | β | 2025 | β |
| Past, present, and future of genomic technologies in cerebellar ataxias. | Lucain M et al. | β | 2025 | β |
| Pathogenic diversity of <i>Cryptococcus</i> in <i>Galleria mellonella</i> extends beyond classical virulence factors. | Sena BAG et al. | β | 2025 | β |
| Pathogenicity and transmissibility of bovine-derived HPAI H5N1 B3.13 virus in pigs. | Kwon T et al. | β | 2025 | β |
| Pathway polygenic risk scores (pPRS) for the analysis of gene-environment interaction. | Gauderman WJ et al. | β | 2025 | β |
| Perioperative nivolumab and chemotherapy in locally advanced squamous cell carcinoma of the oesophagus: a randomized multicentre phase 2 study with circulating tumor DNA dynamics monitoring. | Jiao H et al. | β | 2025 | β |
| Persistent Genomic Erosion in Whooping Cranes Despite Demographic Recovery. | Fontsere C et al. | β | 2025 | β |
| Pervasive and recurrent hybridization prevents inbreeding in Europe's most threatened seabird. | Izquierdo-ArΓ nega G et al. | β | 2025 | β |
| Pervasive sex-dependent effects in the genetic architecture of starvation resistance in <i>Drosophila melanogaster</i>. | Chen J et al. | β | 2025 | β |
| Pf8: an open dataset of <i>Plasmodium falciparumΒ </i>genome variation in 33,325 worldwide samples. | Malaria Genomic Epidemiology Network (MalariaGEN) et al. | β | 2025 | β |
| Pharmacogenetic pilot study of CYP2D6 and CYP1A2 genes in Italian patients with non-dystrophic myotonia and myotonic dystrophy treated with mexiletine. | Brugnoni R et al. | β | 2025 | β |
| Phenotypic landscape of an invasive fungal pathogen reveals its unique biology. | Boucher MJ et al. | β | 2025 | β |
| Phenotypic, transcriptomic, and genomic analyses reveal the spatiotemporal patterns and associated genes of coarse hair density in goats. | Zhang JP et al. | β | 2025 | β |
| Phylloplane bacterial exometabolites suppress Xanthomonas axonopodis pv. punicae: Metabolomic and genomic insights for bacterial blight management in pomegranate. | Chouhan V et al. | β | 2025 | β |
| Phylogenetic Analysis of the Mpox Virus in Sub-Saharan Africa (2022-2024). | Ochieng M et al. | β | 2025 | β |
| Phylogenetic inference reveals clonal heterogeneity in circulating tumor cell clusters. | Gremmelspacher D et al. | β | 2025 | β |
| Phylogenetics and genomic variation of Hepatocystis isolated from shotgun sequencing of wild primate hosts. | Haffener PE et al. | β | 2025 | β |
| Phylogenomic insights into LA-MRSA from Argentine pig farm environments: novel <i>OptrA</i> variant and regional emergence of an ST9 lineage co-circulating with international CC398 lineages. | GonzΓ‘lez MJ et al. | β | 2025 | β |
| Physiology of salt tolerance introgressions from <i>Solanum galapagense</i> in the domesticated tomato. | Bonarota MS et al. | β | 2025 | β |
| PIGOME: An Integrated and Comprehensive Multi-omics Database for Pig Functional Genomics Studies. | Han G et al. | β | 2025 | β |
| Plasmodium falciparum DNA repair dynamics reveal unique roles for TLS polymerases and PfRad51 in genome diversification. | Vishwanatha A et al. | β | 2025 | β |
| Plastome diversity and phylogenetic insights among modern Egyptian wheat cultivars: Genome-Wide and Gene-Level perspectives. | Al-Andal A | β | 2025 | β |
| Polygenic risk score and prostate specific antigen predict death from prostate cancer in men with intermediate aggressive cancer. | Santiago LR et al. | β | 2025 | β |
| Polymorphism-driven transcriptomic changes in anthelmintic metabolism pathways of Anisakis simplex s.s. L3 larvae. | MaΕΊdziarz M et al. | β | 2025 | β |
| Population Genomic Analysis Provides Insights Into the Evolution and Conservation of Two Critically Endangered Musk Deer Species. | Chen G et al. | β | 2025 | β |
| Population genomic landscapes and insights for conservation of the critically endangered island-endemic Chinese pangolin in Taiwan. | Zhai T et al. | β | 2025 | β |
| Population Genomics and Climate Change Vulnerability in Two Sympatric Desert Rodents. | Tian T et al. | β | 2025 | β |
| Population Genomics of Incipient Allochronic Divergence inΒ the Pine Processionary Moth. | Muller T et al. | β | 2025 | β |
| Population genomics reveal multiple independent origins of pesticide resistance in the polyphagous pest, Tetranychus urticae. | Chen L et al. | β | 2025 | β |
| Population Genomics Reveals Demographic History and Climate Adaptation in Japanese Arabidopsis halleri. | Suda RA et al. | β | 2025 | β |
| Population-scale gene expression analysis reveals the contribution of expression diversity to the modern wheat improvement. | Zhang Z et al. | β | 2025 | β |
| Posttransplantation clonal dynamics of hematopoietic stem cells carrying prenatal and early-life <i>DNMT3A</i> mutations. | Derks LLM et al. | β | 2025 | β |
| Potential risk of dipterocarps in the marginal Asian rainforests: low population size and high genomic erosion. | Zhu XL et al. | β | 2025 | β |
| Potential role of avibactam in restoring susceptibility in Escherichia coli with two copies of bla<sub>KPC-3</sub> and PBP3 mutations. | Giuliano S et al. | β | 2025 | β |
| Predicted deleterious mutations reveal the genetic architecture of male reproductive success in a lekking bird. | Chen RS et al. | β | 2025 | β |
| Predicting high confidence ctDNA somatic variants with ensemble machine learning models. | Maruzani R et al. | β | 2025 | β |
| Prediction accuracy for feed intake and body weight gain using host genomic and rumen metagenomic data in beef cattle. | Lakamp A et al. | β | 2025 | β |
| Prematurity and genetic liability for autism spectrum disorder. | Zhang Y et al. | β | 2025 | β |
| Prevalent chromosome fusion in Vibrio cholerae O1. | CuΓ©nod A et al. | β | 2025 | β |
| Primulina pan-genome reveals differential gene retention following whole-genome duplications and provides insights into edaphic specialization. | Feng C et al. | β | 2025 | β |
| QTL and candidate gene analysis unveil genetic control of floretΒ aliphatic glucosinolate side-chain modification in <i>Brassica oleracea</i> through multiparent Fβ populations. | Shen Y et al. | β | 2025 | β |
| QTL mapping for yield contributing traits in mungbean (Vigna radiata L.) using a RIL population. | Reddappa SB et al. | β | 2025 | β |
| QTL-seq approach reveals CONSTANS-like as the candidate gene for inducing early flowering in pigeonpea (Cajanus cajan). | Singh A et al. | β | 2025 | β |
| Quantifying the Evolution of SNPs That Affect RNA Secondary Structure in Arabidopsis thaliana Genes. | Martin GT et al. | β | 2025 | β |
| Quaternary climatic oscillations shaped the demographic history and triggered intraspecific divergence of <i>Rhododendron shanii</i>, a mid-montane endemic in eastern Asia. | Deng Y et al. | β | 2025 | β |
| Quaternary Glaciation Accelerates Speciation in Aquatic Snakes Through Recent Bottlenecks. | Ren JL et al. | β | 2025 | β |
| Racial differences in endometrial cancer genomics and outcomes using UNCseq<sup>TM</sup> targeted DNA sequencing. | Newton MA et al. | β | 2025 | β |
| Rapid Emergence and Evolution of SARS-CoV-2 Intrahost Variants among COVID-19 Patients with Prolonged Infections, Singapore. | Su YCF et al. | β | 2025 | β |
| Rapid-Turnaround Co-Administration of mRNA-Based MHC-I and MHC-II-Restricted Neoantigens Enhances Immune Responses of Antigen-Specific CD8<sup>+</sup> T Cells and Anti-Cancer Efficacy in Colorectal Cancer. | Cho S et al. | β | 2025 | β |
| Rare genetic variants in <i>PKD1</i> and <i>SMAD2</i> are associated with intracranial aneurysms in the general population. | Wolters BM et al. | β | 2025 | β |
| Rare genetic variants involved in increased risk of paroxysmal atrial fibrillation in a Japanese population. | Tabata K et al. | β | 2025 | β |
| Rare phenotypes of white coat color in Simmental calves: genetic causes of syndromic forms of albinism and depigmentation. | Jacinto JGP et al. | β | 2025 | β |
| Rare Variation in LMNA Underlies Polycystic Ovary Syndrome Pathogenesis in 2 Independent Cohorts. | Bauer R et al. | β | 2025 | β |
| Recurrence Prediction by Multi-Omics in the Patient with Colorectal Peritoneal Metastases After Cytoreductive Surgery: A Prospective Biomarker Study. | Chen C et al. | β | 2025 | β |
| Recurrent mutations drive the rapid evolution of pesticide resistance in the two-spotted spider mite <i>Tetranychus urticae</i>. | Cao LJ et al. | β | 2025 | β |
| Reference genome and population genomic analyses reveal insight into herbicide tolerance in Avena fatua L. | Liu J et al. | β | 2025 | β |
| Reference genome choice compromises population genetic analyses. | Akopyan M et al. | β | 2025 | β |
| Regulation of gene expression under high hydrostatic pressure: the versatile role of the master regulator SurR in energy metabolism. | Moalic Y et al. | β | 2025 | β |
| Renal Prognostic Identification in Patients With Autosomal Dominant Polycystic Kidney Disease by Whole Genome Sequencing: A Prospective, Observational Study. | Kai H et al. | β | 2025 | β |
| Reproductive Isolation due to Divergent Ecological Selection Is Accompanied by Vast Genomic Instability in Experimentally Evolved Yeast Populations. | Bendixsen DP et al. | β | 2025 | β |
| Resequencing and phenotyping of the first highly inbred eggplant multiparent population reveal <i>SmLBD13</i> as a key gene associated with root morphology. | Arrones A et al. | β | 2025 | β |
| Resolving early embryonic metabolism in Drosophila through single-embryo metabolomics and transcriptomics. | PΓ©rez-Mojica JE et al. | β | 2025 | β |
| Resolving spatial subclonal genomic heterogeneity of loss of heterozygosity and extrachromosomal DNA in gliomas. | Webb MG et al. | β | 2025 | β |
| Resource: A compendium of HLA types and expression in pediatric cancer models. | Guan Y et al. | β | 2025 | β |
| Respiration defects limit serine synthesis required for lung cancer growth and survival. | Cararo Lopes E et al. | β | 2025 | β |
| Reveal genomic insights into cotton domestication and improvement using gene level functional haplotype-based GWAS. | Qi G et al. | β | 2025 | β |
| Reversible compromise of physiological resilience by accumulation of heteroplasmic mtDNA mutations. | Huang H et al. | β | 2025 | β |
| Revisiting the emergence of the Chikungunya virus in Alagoas, Northeast of Brazil. | de AraΓΊjo MA et al. | β | 2025 | β |
| ROBIN: A unified nanopore-based assay integrating intraoperative methylome classification and next-day comprehensive profiling for ultra-rapid tumor diagnosis. | Deacon S et al. | β | 2025 | β |
| Role of novel mutations in food vacuole transporters beyond K13-mediated artemisinin resistance in <i>Plasmodium falciparum</i>. | Junaid IT et al. | β | 2025 | β |
| Role of paternal Oryza sativa Baby Booms (OsBBMs) in initiating de novo gene expression and regulating early zygotic development in rice. | Akter N et al. | β | 2025 | β |
| ROS-induced allosteric modulation of NikR promotes <i>Helicobacter pylori</i> biofilm formation by attenuating FlgR-dependent inhibition of the molybdate transport system. | Zheng Y et al. | β | 2025 | β |
| SARS-CoV-2 infection dynamics in a MHCI-mismatched lung transplant recipient. | Fuchs J et al. | β | 2025 | β |
| Saturating the eQTL map in Drosophila: Genome-wide patterns of cis and trans regulation of transcriptional variation in outbred populations. | Pallares LF et al. | β | 2025 | β |
| Screening of a core SNP set for the seedling identification of Saccharina japonica cultivars in northern China. | Wang X et al. | β | 2025 | β |
| Selective sweep analysis reveals candidate genes related to immunity in Licha black pig. | Wang T et al. | β | 2025 | β |
| Selfish mutations promote age-associated erosion of mtDNA integrity in mammals. | Korotkevich E et al. | β | 2025 | β |
| Senescence and inflammation are unintended adverse consequences of CRISPR-Cas9/AAV6-mediated gene editing in hematopoietic stem cells. | Conti A et al. | β | 2025 | β |
| Sequence-based genome-wide association study and fine-mapping in German Holstein reveal new quantitative trait loci for health traits. | KriΕΎanac AM et al. | β | 2025 | β |
| Sequencing of historical plastid genomes reveal exceptional genetic diversity in early domesticated rye plants. | Komluski J et al. | β | 2025 | β |
| Sequential Plasma Metabolome and Proteome Analyses to Develop a Novel Monitoring Strategy for Patients with Epithelial Ovarian Cancer: A Pilot Study. | Hishinuma E et al. | β | 2025 | β |
| Sexual selection drives the speciation of lineages with contrasting mating systems. | Orsucci M et al. | β | 2025 | β |
| Sheltered load in fungal mating-type chromosomes revealed by fitness experiments. | Guyot L et al. | β | 2025 | β |
| Signatures of omicron-like adaptation in early SARS-CoV-2 variants and chronic infection. | Cheng MTK et al. | β | 2025 | β |
| Single-cell and spatial transcriptomic characterization of pulmonary pleomorphic carcinoma. | Matsuoka A et al. | β | 2025 | β |
| Single-cell chromosome and bulk transcriptome analysis as a diagnostic tool to differentiate between localized and metastatic pheochromocytoma and sympathetic paraganglioma. | Berends AMA et al. | β | 2025 | β |
| Single-Cell RNA Sequencing of Ewing Sarcoma Tumors Demonstrates Transcriptional Heterogeneity and Clonal Evolution. | Goodspeed A et al. | β | 2025 | β |
| Single-molecule DNA analysis implicates brain mitochondria pathology in bipolar disorder. | Ohtani H et al. | β | 2025 | β |
| Single nucleotide polymorphisms and penicillin non-susceptibility among invasive Streptococcus pneumoniae from Vietnam and India: Insights from a comparative genomics study. | Panickar A et al. | β | 2025 | β |
| Single Nucleotide Polymorphisms, Structural Variants, and Short Tandem Repeats Capture Distinct Signals of Adaptive Divergence in the Atlantic Puffin. | Kersten O et al. | β | 2025 | β |
| Sintilimab plus chemotherapy for first-line treatment of advanced pulmonary lymphoepithelioma-like carcinoma: Phase 2 trial. | Lin X et al. | β | 2025 | β |
| SKSR1 identified as key virulence factor in Cryptosporidium by genetic crossing. | He W et al. | β | 2025 | β |
| SNP associations in the L-citrulline metabolic pathway and vascular aging in the Japanese population. | Nogimura D et al. | β | 2025 | β |
| Soma-localized Rab39 inhibits synaptic autophagy by controlling trafficking of Atg9 vesicles. | Kilic A et al. | β | 2025 | β |
| Sonic hedgehog medulloblastomas are dependent on Netrin-1 for survival. | Talbot J et al. | β | 2025 | β |
| Spatially Varying Selection Amplifies Intrapopulation Differentiation Among Phenotypic Traits in the Rocky-Shore Mussel, <i>Mytilus californianus</i>. | Richards CS et al. | β | 2025 | β |
| Spatial variation in the mutation rate within the plant shoot apical meristem. | Amundson KR et al. | β | 2025 | β |
| Spina bifida, diplomyelia, and Chiari-like malformation in an Aberdeen Angus calf. | Korte A et al. | β | 2025 | β |
| Spread of a Single Superclone Drives Insecticide Resistance in Acyrthosiphon kondoi Across an Invasive Range. | Thia JA et al. | β | 2025 | β |
| Stochastic phenotypic switching arises in response to directional selection in experimentally evolved multicellular yeast. | Baselga-Cervera B et al. | β | 2025 | β |
| Striking convergent selection history of wheat and barley and its potential for breeding. | Sow MD et al. | β | 2025 | β |
| Structural variant landscape provides insights into genome organisation and domestication in European seabass. | Jiao Z et al. | β | 2025 | β |
| Subclonal response heterogeneity to define cancer organoid therapeutic sensitivity. | Kratz JD et al. | β | 2025 | β |
| Sub-lethal insecticide stress alters epimutation rate but not genetic mutation rate in the pest insect Myzus persicae. | Hunt BJ et al. | β | 2025 | β |
| Surveillance and analysis of drug resistance and drug resistance levels in multidrug resistant tuberculosis on the tropical islands of China. | Wang J et al. | β | 2025 | β |
| Surviving Colonies of <i>Pseudomonas aeruginosa</i> Isolated In Vivo from Infected, Antibiotic-Treated <i>Galleria mellonella</i> Larvae Acquire an Antibiotic-Tolerant Phenotype. | McCormack A et al. | β | 2025 | β |
| Sweeps in Space: Leveraging Geographic Data to Identify Beneficial Alleles in Anopheles gambiae. | Rehmann CT et al. | β | 2025 | β |
| SWS1-complex in premature ovarian insufficiency: SWSAP1 as a new POI gene. | Lokchine A et al. | β | 2025 | β |
| Systematically identification of survival-associated eQTLs in a Japanese kidney cancer cohort. | Song X et al. | β | 2025 | β |
| Systematic profiling reveals hepatic immune and metabolic dysregulation in DNASE1L3-deficient mice. | Lei L et al. | β | 2025 | β |
| T2T-CHM13 improves read mapping and detection of clinically relevant genetic variation in the Swedish population. | Schmitz D et al. | β | 2025 | β |
| Tandem inactivation of inositol pyrophosphatases Asp1, Siw14, and Aps1 illuminates functional redundancies in inositol pyrophosphate catabolism in fission yeast. | Schwer B et al. | β | 2025 | β |
| Targeted genotyping (90K-SPET) facilitates genome-wide association studies and the prediction of yield-related traits in faba bean (Vicia faba L.). | Lippolis A et al. | β | 2025 | β |
| Targeted seed EMS mutagenesis reveals a basic helix-loop-helix transcription factor underlying male sterility in sorghum. | Xiao Y et al. | β | 2025 | β |
| Telomere-to-telomere genome assembly uncovers Wolbachia-driven recurrent male bottleneck effect and selection in a sawfly. | Zhang M et al. | β | 2025 | β |
| Temporal Genomics Reveal a Century of Genomic Diversity Shifts Across a Biodiversity Hotspot Avian Assemblage. | Manthey JD et al. | β | 2025 | β |
| Testing for age- and sex-specific mitonuclear epistasis in Drosophila. | Garlovsky MD et al. | β | 2025 | β |
| The bottleneck for maternal transmission of mtDNA is linked to purifying selection by autophagy. | Kremer LS et al. | β | 2025 | β |
| The C11orf24 Gene as a Useful Biomarker for Predicting Severe Neutropenia in Modified FOLFIRINOX for Pancreatic Cancer. | Kanesada G et al. | β | 2025 | β |
| The complete reference genome of Tartary buckwheat and its mutation library provide important resources for genetic studies and breeding. | Li H et al. | β | 2025 | β |
| The critical role of PSAC channel in malaria parasite survival is driven home by phenotypic screening under relevant nutrient levels. | Molina I et al. | β | 2025 | β |
| The dynamic epigenetic atlas and its effects on instability of starch and seed storage protein quality traits in wheat (<i>Triticum aestivum</i> L.). | Wang Y et al. | β | 2025 | β |
| The emergence of resistance to the antiparasitic selamectin in <i>Mycobacterium smegmatis</i> is improbable and contingent on cell wall integrity. | Ezquerra-AznΓ‘rez JM et al. | β | 2025 | β |
| The fourspine stickleback (Apeltes quadracus) has an XY sex chromosome system with polymorphic inversions on both X and Y chromosomes. | Liu Z et al. | β | 2025 | β |
| The Genomic Basis of the Svalbard Reindeer's Adaptation to an Extreme Arctic Environment. | Dussex N et al. | β | 2025 | β |
| The Germline and Somatic Origins of Prostate Cancer Heterogeneity. | Yamaguchi TN et al. | β | 2025 | β |
| The impact of bioinformatic choices on <i>Coccidioides</i> variant identification accuracy. | Marchetti M et al. | β | 2025 | β |
| The knockout of ClaCSLH1 induced dwarfing in watermelon. | Bao J et al. | β | 2025 | β |
| The Landscape of Structural Variation in Aye-Ayes (Daubentonia madagascariensis). | Versoza CJ et al. | β | 2025 | β |
| The loss of a supergene in obligately polygynous Formica wood ant species. | Sigeman H et al. | β | 2025 | β |
| The <i>v <sup>24</sup></i> Allele is a Missense Mutation Within the Predicted Tryptophan 2,3-dioxygenase Protein Domain of <i>vermilion</i>. | Raab LM et al. | β | 2025 | β |
| The nature of complex structural variations in tomatoes. | Cui X et al. | β | 2025 | β |
| The origin and evolution of cultivated rice and genomic signatures of heterosis for yield traits in super-hybrid rice. | Zhao Y et al. | β | 2025 | β |
| The PIK3CA/AKT pathway drives therapy resistance in rhabdomyosarcoma. | Yang Q et al. | β | 2025 | β |
| The p.Ile202Thr Substitution in TUBB2B Can Be Associated with Syndromic Presentation of Congenital Fibrosis of the Extraocular Muscles. | Mancini C et al. | β | 2025 | β |
| The proteogenomic landscape of the human kidney and implications for cardio-kidney-metabolic health. | Hirohama D et al. | β | 2025 | β |
| The putative endo-1,4-Ξ²-D-glucanase GLU3 regulates cellulose biosynthesis in barley roots. | Guo L et al. | β | 2025 | β |
| The role of holobiont composition and environmental history in thermotolerance of Tropical Eastern Pacific corals. | Glynn VM et al. | β | 2025 | β |
| The roles of NHEJ and TLS pathways in genomic alterations and phenotypic evolution in the yeast Yarrowia lipolytica. | Yan C et al. | β | 2025 | β |
| The serine palmitoyl transferase of plant pathogenic fungi: a promising new target for the development of novel crop protection solutions<sup>β </sup>. | Nicolas L et al. | β | 2025 | β |
| The SIK3-N783Y mutation is associated with the human natural short sleep trait. | Chen H et al. | β | 2025 | β |
| The tandem duplicator phenotype may be a novel targetable subgroup in pancreatic cancer. | Farooq AR et al. | β | 2025 | β |
| The Thienopyrimidinone GamhΓ©pathiopine Targets the Q<sub>O</sub> Site of <i>Plasmodium falciparum</i> Cytochrome <i>b</i>. | Wiedemar N et al. | β | 2025 | β |
| The two sub-genomes of the allotetraploid frog Xenopus laevis are evolving under similar selective pressure in extant populations. | Almojil D et al. | β | 2025 | β |
| The white lupin CCR1 receptor-like kinase controls systemic Autoregulation of Cluster Root and Nodule Development. | MarquΓ¨s L et al. | β | 2025 | β |
| The whole genome analysis of the wild-type and attenuated orf virus reveals that ORF022 facilitates viral replication. | Jing T et al. | β | 2025 | β |
| Tissue-specific expression and functional role of keratin 1 in sheep horn development. | Mei Q et al. | β | 2025 | β |
| To be or not to be a protein coding mutation, that's the question! | De Groote D et al. | β | 2025 | β |
| Toward streamline variant classification: discrepancies in variant nomenclature and syntax for ClinVar pathogenic variants across annotation tools. | Chen YA et al. | β | 2025 | β |
| Transcription factors instruct DNA methylation patterns in plant reproductive tissues. | Xu G et al. | β | 2025 | β |
| Transcription fidelity and control of alternative splicing contribute to heat stress survival in Arabidopsis. | Szaker HM et al. | β | 2025 | β |
| Transcriptomic analysis of rice cultivars with distinct resistance mechanisms to <i>Xanthomonas oryzae</i> pv. <i>oryzicola</i> reveals novel components and candidate genes associated with bacterial leaf streak. | Win MMK et al. | β | 2025 | β |
| Transcriptomic profiling of unmethylated full mutation carriers implicates TET3 in FMR1 CGG repeat expansion methylation dynamics in fragile X syndrome. | Farmiloe G et al. | β | 2025 | β |
| Translational landscape provides insight into the molecular mechanism of heterosis in inter-subspecific hybrid rice. | Xi Z et al. | β | 2025 | β |
| Translational regulation plasticity shapes wheat grain adaptation to heat stress. | Chen Y et al. | β | 2025 | β |
| Transposition of a non-autonomous element into the G<sub>Ξ²</sub> gene of Schizophyllum commune causes the streak mutation. | d'Errico A et al. | β | 2025 | β |
| Trehalose catalytic shift inherently enhances phenotypic heterogeneity and multidrug resistance in Mycobacterium tuberculosis. | Lee JJ et al. | β | 2025 | β |
| Triploidy drives vector capacity and expansion of the parthenogenetic tick Haemaphysalis longicornis. | Wang T et al. | β | 2025 | β |
| Tumor antigens preferentially derive from unmutated genomic sequences in melanoma and non-small cell lung cancer. | Apavaloaei A et al. | β | 2025 | β |
| Two genes, one culprit - a functional candidate validation of a SPATA7 deletion in dogs with day blindness/retinal degeneration. | Murgiano L et al. | β | 2025 | β |
| Two haplotype-resolved telomere-to-telomere genome assemblies of Xanthoceras sorbifolium. | Liu Y et al. | β | 2025 | β |
| Two mutations in the same MYC-bHLH transcription factor cause segregation of purple coloration of stolons and seed heads in <i>Zoysia japonica</i>βΓβ<i>Zoysia matrella</i> F<sub>2</sub> and F<sub>1</sub> populations. | Pradhan S et al. | β | 2025 | β |
| Type VII secretion system gene mutations driving global mycobacterium tuberculosis transmission revealed by whole genomic sequence. | Yang JJ et al. | β | 2025 | β |
| Ultrahigh-throughput screening of heterogeneous vancomycin-intermediate Staphylococcus aureus based on fluorescence-activated droplet sorting. | Cheng X et al. | β | 2025 | β |
| Uncovering the genetic basis of <i>Staphylococcus</i> <i>aureus</i> resistance to single antimicrobial peptides and their combinations. | Maron B et al. | β | 2025 | β |
| Understanding the epidemiology and pathogenesis of Mycobacterium tuberculosis with non-redundant pangenome of epidemic strains in China. | Zhou Y et al. | β | 2025 | β |
| Unraveling genetic diversity and population structure of pineapple germplasm using genome-wide SNP markers. | Lyu H et al. | β | 2025 | β |
| Unraveling lignocellulosic xylan degradation by a novel strain of Streptomyces sp.: an exploration through genomic and transcriptomic perspectives. | Thomas L et al. | β | 2025 | β |
| Unveiling population structure in South Pacific albacore: insights from genetics and growth. | Lu D et al. | β | 2025 | β |
| Unveiling the Genetic and Physiological Synergies of Iron and Sulfur Homeostasis in Durum Wheat: From Root to Grain. | Bruschini A et al. | β | 2025 | β |
| Unveiling the genetic basis of biochemical pathways of plant growth promotion in <i>Bacillus pumilus</i> and the first genomic insights into <i>B. pseudomycoides</i> as a biostimulant. | Dushku E et al. | β | 2025 | β |
| Urban Life Shapes Genetic Diversity in the Green Anole, Anolis carolinensis. | Bourgeois Y et al. | β | 2025 | β |
| Uridine as a potentiator of aminoglycosides through activation of carbohydrate transporters. | Lang M et al. | β | 2025 | β |
| Using landscape genomics to infer genomic regions involved in environmental adaptation of soybean genebank accessions. | Haupt M et al. | β | 2025 | β |
| Using MUC2 mucin producing tumorigenic human goblet-like cells to uncover functional properties of the mucus barrier. | Gorman H et al. | β | 2025 | β |
| Variation analysis using random forests reveals domestication patterns and breeding trends in sugar beet. | Sandell FL et al. | β | 2025 | β |
| Virulence and genome analysis of three historical <i>Francisella tularensis</i> ssp. <i>holarctica</i> isolates for development of a Type B test panel. | Mlynek KD et al. | β | 2025 | β |
| VIRUS-MVP: a framework for comprehensive surveillance of viral mutations and their functional impacts. | Anwar MZ et al. | β | 2025 | β |
| Wheat COBRA-like Gene <i>TaCOBL6A2</i> Confers Heat Tolerance in Plants. | Deng Q et al. | β | 2025 | β |
| Whole exome sequencing and single-cell DNA sequencing for assessment of clonal heterogeneity and evolution in acute myeloid leukemia. | Adhikari S et al. | β | 2025 | β |
| Whole-exome sequencing identifies 5 novel genes associated with carpal tunnel syndrome. | Wang ZY et al. | β | 2025 | β |
| Whole-exome sequencing reveals the mutational landscape of head and neck lymphoepithelioma-like carcinoma. | Zhang Q et al. | β | 2025 | β |
| Whole exome sequencing shows novel COL4A3 and COL4A4 variants as causes of Alport syndrome in Rio Grande do Norte, Brazil. | de AraΓΊjo WC et al. | β | 2025 | β |
| Whole-genome polymorphisms and relatedness of rice varieties circulating in the Mediterranean market. | Rodrigues HM et al. | β | 2025 | β |
| Whole-genome resequencing-based assessment of genomic diversity and selection signatures in Rhipicephalus microplus from Shaanxi, China. | Mou YY et al. | β | 2025 | β |
| Whole-Genome Resequencing Provides Novel Insights Into the Genetic Diversity, Population Structure, and Patterns of Runs of Homozygosity in Mud Crab (<i>Scylla paramamosain</i>). | Zhou X et al. | β | 2025 | β |
| Whole-genome resequencing revealed genetic structure and specific breed identification loci of Ningxia Jingyuan chicken breed (Gallus gallus). | Yue YX et al. | β | 2025 | β |
| Whole-genome resequencing reveals chromosomal fusion-driven early stages of XY chromosomes evolution in the darkbarbel catfish (Tachysurus vachellii). | Liu J et al. | β | 2025 | β |
| Whole Genome Resequencing Reveals Origins and Global Invasion Pathways of the Japanese Beetle Popillia japonica. | Funari R et al. | β | 2025 | β |
| Whole-genome resequencing reveals positive selection and introgression signatures and genetic loci associated with early puberty traits in Chinese indigenous pigs. | Cao M et al. | β | 2025 | β |
| Whole genome sequence of petroleum hydrocarbon degrading novel strain Microbacter sp. EMBS2025 isolated from Chilika Lake, Odisha, India. | Nayarisseri A et al. | β | 2025 | β |
| Whole genome sequences of 289 native cattle from Finland, the Netherlands, and Portugal. | Ginja C et al. | β | 2025 | β |
| Whole-genome sequencing analysis of Burkholderia pseudomallei comparing drug-resistant and pan-susceptible isolates reveals novel biomarkers for drug resistance. | Hinwan Y et al. | β | 2025 | β |
| Whole-genome sequencing and bioinformatic tools powered by machine learning to identify antibiotic-resistant genes and virulence factors in <i>Escherichia coli</i> from sepsis. | Kumar NR et al. | β | 2025 | β |
| Whole-genome sequencing and comparative genomic analysis of <i>Irpex lacteus</i> isolated from the female reproductive tract. | Wang Y et al. | β | 2025 | β |
| Whole genome sequencing and molecular detection of potato virus X in Bangladesh. | Islam MS et al. | β | 2025 | β |
| Whole-genome sequencing and variants data of 304 indigenous goats from Southwest China. | Zhang J et al. | β | 2025 | β |
| Whole genome sequencing data of 14 indigenous Greek goats. | Tsoureki A et al. | β | 2025 | β |
| Whole-genome sequencing of 1,083 HPV45 cases and controls identifies genetic variants associated with glandular cervical lesions. | Koestler AJ et al. | β | 2025 | β |
| Whole-genome sequencing of Tahe red deer (<i>Cervus hanglu yarkandensis</i>) reveals genetic diversity and selection signatures. | Pi T et al. | β | 2025 | β |
| Whole-genome sequencing resources of 301 indigenous Tibetan sheep from the Himalayan region. | Zhang J et al. | β | 2025 | β |
| Whole-genome sequencing revealed genetic structure, patterns of selection and molecular identity card in "Yufen 1" D line chickens. | Liu C et al. | β | 2025 | β |
| Whole-genome sequencing reveals complex structural variations at a major locus linked to pigmented spot sizes in Tianfu goats. | Guo J et al. | β | 2025 | β |
| Whole-genome sequencing reveals genetic diversity, population structure, and core collection construction in Korean peach (<i>Prunus persica</i>) germplasm. | Bae SH et al. | β | 2025 | β |
| Whole Genome Sequencing Reveals How Plasticity and Genetic Differentiation Underlie Sympatric Morphs of Arctic Charr. | Kurta K et al. | β | 2025 | β |
| Widespread Genetic Signals of Visual System Adaptation in Deepwater Cichlid Fishes. | Camacho GarcΓa JI et al. | β | 2025 | β |
| Widespread temporal niche partitioning in an adaptive radiation of cichlid fishes. | Nichols ALA et al. | β | 2025 | β |
| XDH-1 inactivation causes xanthine stone formation in Caenorhabditis elegans which is inhibited by SULP-4-mediated anion exchange in the excretory cell. | Snoozy J et al. | β | 2025 | β |
| Zymoseptoria tritici stealth infection is facilitated by stage-specific downregulation of a Ξ²-glucanase. | Rebaque D et al. | β | 2025 | β |