Rapid and accurate haplotype phasing and missing-data inference for whole-genome association studies by use of localized haplotype clustering.
paper
Cited
Public
Unavailable
- Authors
- Browning, Sharon R; Browning, Brian L
- Year
- 2007
- Journal
- American journal of human genetics
- PMID
- 17924348
- DOI
- 10.1086/521987
- PMCID
- PMC2265661
Whole-genome association studies present many new statistical and computational challenges due to the large quantity of data obtained. One of these challenges is haplotype inference; methods for haplotype inference designed for small data sets from candidate-gene studies do not scale well to the large number of individuals genotyped in whole-genome association studies. We present a new method and software for inference of haplotype phase and missing data that can accurately phase data from whole-genome association studies, and we present the first comparison of haplotype-inference methods for real and simulated data sets with thousands of genotyped individuals. We find that our method outperforms existing methods in terms of both speed and accuracy for large data sets with thousands of individuals and densely spaced genetic markers, and we use our method to phase a real data set of 3,002 individuals genotyped for 490,032 markers in 3.1 days of computing time, with 99% of masked alleles imputed correctly. Our method is implemented in the Beagle software package, which is freely available.
No figures extracted from this document.
No chunks β full text not yet ingested.
No entities extracted from this document yet.
No uploaded files.
Not in any collection.
No citations found.
In this knowledge base
External
| Title | Authors | Journal | Year | Link |
|---|---|---|---|---|
| Advances in haplotype phasing and genotype imputation. | Sun Q et al. | β | 2026 | β |
| A haplotype reference panel and genotype imputation framework for the black soldier fly (Hermetia illucens). | Muchina P et al. | β | 2026 | β |
| A large-effect locus underlies migration timing in North American Atlantic salmon (Salmo salar). | Beck SV et al. | β | 2026 | β |
| A Novel Deleterious Variant and a Founder Effect in Four New Families of MBD4-Associated Neoplasia Syndrome Recruited Over a Period of 20βYears. | Querido I et al. | β | 2026 | β |
| APOE and plasma AD biomarkers: The role of genetic ancestry in Hispanics/Latinos. | Cheung C et al. | β | 2026 | β |
| Collaboration of the symbiotic microbiome and host genome during the high altitude adaptation of chickens. | Jin J et al. | β | 2026 | β |
| Combination of color-related genes regulates pigment composition and establishes diverse coloration in soybean. | Suganami M et al. | β | 2026 | β |
| DNA methylation site loss for plasticity-led novel trait genetic fixation. | Katsumura T et al. | β | 2026 | β |
| Exploring standing genetic variation for barley leaf rust resistance in Australian breeding panel. | Pandit M et al. | β | 2026 | β |
| Fine-scale structure of a whole regional population through genetics and genealogies. | Morin GP et al. | β | 2026 | β |
| Genetic risk factors for pneumonia differ by patient subgroup. | HeikkilΓ€ A et al. | β | 2026 | β |
| Genomic analysis reveals potential involvement of the brain-retina axis in regulating chicken feeding behavior. | Wang P et al. | β | 2026 | β |
| Genomic divergence and sex-linked region of Welwitschia mirabilis revealed by whole-genome re-sequencing. | Sun JJ et al. | β | 2026 | β |
| Genomic insights into chromosomal fusion and its evolutionary implications for zokors. | Kuang Z et al. | β | 2026 | β |
| Genomic insights into the population history of fat-tailed sheep and identification of two mutations that contribute to fat tail adipogenesis. | Jin M et al. | β | 2026 | β |
| Host genomic regulation of ileal Bradyrhizobium abundance modulates eating speed and fat metabolism in birds: a causal mechanism study. | Zhao Y et al. | β | 2026 | β |
| Human-mediated dispersal and breeding reshape global genomic patterns in black soldier flies. | Muchina P et al. | β | 2026 | β |
| Identification of race 2 anthracnose resistance Quantitative Trait Loci using biparental and association panel of diverse watermelon germplasm accessions. | Bhatta BP et al. | β | 2026 | β |
| Increased Genetic Load in Breed Chickens and Reduced Coding Content in Long ROH. | Huang R et al. | β | 2026 | β |
| Integrating pan-genome analysis, GWAS, and interpretable machine learning to prioritize trait-associated structural variations in Setaria italica. | Wang W et al. | β | 2026 | β |
| Leveraging ancestral recombination graphs for scalable mixed-model analysis of complex traits. | Zhu J et al. | β | 2026 | β |
| MetaGLIMPSE: Meta-imputation of low-coverage sequencing data for modern and ancient genomes. | Kumar KH et al. | β | 2026 | β |
| Molecular marker development for salt tolerance in cowpea: insights from genome-wide association analysis at the early vegetative stage. | Kang BH et al. | β | 2026 | β |
| Multi-omics reveals co-regulation of hepatic bile acid metabolism in laying hens by host genetics and the cecal Anaerostipes. | Yang W et al. | β | 2026 | β |
| Multiple-testing corrections in case-control studies using identity-by-descent segments. | Temple SD et al. | β | 2026 | β |
| Population structure and genetic diversity of Phakopsora pachyrhizi in the Southeastern United States. | Clary J et al. | β | 2026 | β |
| The 1000 Chinese Pangenome empowers medical and population genetics. | Wang Y et al. | β | 2026 | β |
| The ChickenGTEx portal: a pan-tissue catalogue of regulatory variants shaping transcriptomic and phenotypic diversity. | Hou Y et al. | β | 2026 | β |
| The Late Quaternary climate impact on the genome of the woodland strawberry (Fragaria vesca), a perennial herb. | Toivainen T et al. | β | 2026 | β |
| The relationship between genotype- and phenotype-based estimates of genetic liability to psychiatric disorders, in practice and in theory. | Dybdahl Krebs M et al. | β | 2026 | β |
| Tissue-resolved molecular landscape reveals hepatic regulatory networks and metabolic mediators underlying feed efficiency in chickens. | Zhang W et al. | β | 2026 | β |
| Unlocking genetic diversity in Colombian cassava landraces for accelerated breeding. | Zhao K et al. | β | 2026 | β |
| Variant Prioritization by Pedigree-Based Haplotyping. | Nafikov RA et al. | β | 2026 | β |
| A genome-wide association study identified candidate genes associated with egg quality traits in Muscovy duck. | Yang W et al. | β | 2025 | β |
| A High-Resolution Genomic Study of the Pama-Nyungan Speaking Yolngu People of Northeast Arnhem Land, Australia. | White N et al. | β | 2025 | β |
| Airway transcriptome networks for ozone and PM<sub>2.5</sub> exposure reveal distinct key drivers for children with asthma. | Chun Y et al. | β | 2025 | β |
| Allopatric Speciation and Interspecific Gene Flow Driven by Niche Conservatism of Diploderma Tree Lizards in Taiwan. | Lin TH et al. | β | 2025 | β |
| A multi-tissue atlas of allelic-specific expression reveals the characteristics, mechanisms, and relationship with dominant effects in cattle. | Li J et al. | β | 2025 | β |
| Ancient DNA connects large-scale migration with the spread of Slavs. | Gretzinger J et al. | β | 2025 | β |
| Ancient dog introgression into the Iberian wolf genome may have facilitated adaptation to human-dominated landscapes. | Lobo D et al. | β | 2025 | β |
| A privacy-preserving HLA imputation method with homomorphic encryption. | Kim H et al. | β | 2025 | β |
| Association between ancestry and tumor somatic mutations in a large national cohort of women with breast cancer. | Fergus KB et al. | β | 2025 | β |
| Association Between Dietary Tomato Intake and Blood Eosinophil Count in Middle-Aged and Older Japanese Individuals: A Population-Based Cross-Sectional Study. | Hara A et al. | β | 2025 | β |
| Best practices for genotype imputation from low-coverage sequencing data in natural populations. | Watowich MM et al. | β | 2025 | β |
| Beyond the genome: the role of functional markers in contemporary plant breeding. | Park TC et al. | β | 2025 | β |
| Crop wild relative populations of Beta vulgaris as source for genome-wide association mapping of complex traits. | Bertram L et al. | β | 2025 | β |
| Deciphering the coordinated roles of the host genome, duodenal mucosal genes, and microbiota in regulating complex traits in chickens. | Lan F et al. | β | 2025 | β |
| Decoding the beef cattle genome through whole-genome sequencing reveals the genetic basis of carcass and meat quality traits. | Nanaie HA et al. | β | 2025 | β |
| Deep sequencing of Korean Jindo dog reveals evolutionary trajectory of coat color variations. | Kang D et al. | β | 2025 | β |
| Disentangling Complex Histories of Hybridisation: The Genomic Consequences of Ancient and Recent Introgression in Channel Island Monkeyflowers. | Short AW et al. | β | 2025 | β |
| Dissection of genomic drivers of spike morphology changes in wheat by high-throughput phenotyping. | Shen K et al. | β | 2025 | β |
| Enhancing inbreeding estimation and global conservation insights through chromosome-level assemblies of the Chinese and Malayan pangolin. | Lan T et al. | β | 2025 | β |
| Evaluation of genetic diversity and selection signals in gayal populations across four countries through whole-genome resequencing. | Liu X et al. | β | 2025 | β |
| Evaluation of genomic and phenomic prediction for application in apple breeding. | Jung M et al. | β | 2025 | β |
| Evaluation of Low-Coverage Sequencing Strategies for Whole-Genome Imputation in Pacific Abalone <i>Haliotis discus hannai</i>. | Fei C et al. | β | 2025 | β |
| Exploring genomic feature selection: A comparative analysis of GWAS and machine learning algorithms in a large-scale soybean dataset. | Al-Mamun HA et al. | β | 2025 | β |
| Fast and accurate imputation of genotypes from noisy low-coverage sequencing data in bi-parental populations. | Triay C et al. | β | 2025 | β |
| Genetic Origins of the Kiritimati Population from Central-Eastern Micronesia. | Larena M et al. | β | 2025 | β |
| Genetics and context for precision health in Greater Boston. | Koyama S et al. | β | 2025 | β |
| Genetic Variation in a Crossing Population of <i>Camellia oleifera</i> Based on ddRAD Sequencing and Analysis of Association with Fruit Traits. | Zhou L et al. | β | 2025 | β |
| Genetic variation influences food-sharing sociability in honey bees. | Traniello IM et al. | β | 2025 | β |
| Genome-wide analyses of genomic diversity, population structure and selection signatures in Italian turkey populations. | Saleh MS et al. | β | 2025 | β |
| Genome-wide analyses reveal intricate genetic mechanisms underlying egg production efficiency in chickens. | Tan L et al. | β | 2025 | β |
| Genome-wide analysis of genetic diversity and selection signatures in Fuzhou cattle. | Wang N et al. | β | 2025 | β |
| Genome-wide association analysis of Septoria tritici blotch for adult plant resistance in elite bread wheat (Triticum aestivum L) genotypes. | Kassie MM et al. | β | 2025 | β |
| Genome-wide association analysis of winter survival in a diverse Canadian winter wheat population. | Whiting R et al. | β | 2025 | β |
| Genome-wide association and fine-mapping analyses identify novel candidate genes affecting serum cortisol levels using imputed whole-genome sequencing data in pigs. | Kim TH et al. | β | 2025 | β |
| Genome-wide association studies and genetic architecture of carcass traits in Angus beef cattle using imputed whole-genome sequences data. | Baneh H et al. | β | 2025 | β |
| Genome-wide association studies on body-weight and body-size traits among Zhedong white geese based on a modified genotyping-by-sequencing method. | Yang Y et al. | β | 2025 | β |
| Genome-wide association study of pulpal and apical diseases. | Salminen A et al. | β | 2025 | β |
| Genome-wide association study of REM sleep behavior disorder in Parkinson's disease. | Sosero YL et al. | β | 2025 | β |
| Genome-Wide Association Study Pinpoints Novel Candidate Genes Associated with the Gestation Length of the First Parity in French Large White Sows. | Duan D et al. | β | 2025 | β |
| Genome-wide association testing beyond SNPs. | Harris L et al. | β | 2025 | β |
| Genomic Analysis of Hair Sheep From West/Central Africa Reveals Unique Genetic Diversity and Ancestral Links to Breed Formation in the Caribbean. | Wiener P et al. | β | 2025 | β |
| Genomic ancestry and adaptive signatures in the indigenous Hetian cattle from Xinjiang Province of China revealed by whole-genome sequencing. | Liu X et al. | β | 2025 | β |
| Genomic and genetic insights into Mendel's pea genes. | Feng C et al. | β | 2025 | β |
| Genomic evidence for behavioral adaptation of herding dogs. | Jeong H et al. | β | 2025 | β |
| Genomic insights into population structure and predictive breeding for climate-resilient coffee. | Pokou ND et al. | β | 2025 | β |
| Genomic insights into racing camels: inbreeding levels and positive selection linked to athletic traits. | Bahbahani H et al. | β | 2025 | β |
| Genomic insights into the genetic diversity and genetic basis of body height in endangered Chinese Ningqiang ponies. | Han J et al. | β | 2025 | β |
| Genomic insights into the genetic diversity, lateral gaits and high-altitude adaptation of Chakouyi (CKY) horses. | Liu YK et al. | β | 2025 | β |
| Genomic insights into the recent evolution and biodiversity of Italian sheep breeds. | Bionda A et al. | β | 2025 | β |
| Genomic Prediction for Growth-Related Traits in Golden Pompano (<i>Trachinotus ovatus</i>). | Sun H et al. | β | 2025 | β |
| Genomic selection and weighted single-step genome-wide association study of sheep body weight and milk yield: Imputing low-coverage sequencing data with similar genetic background panels. | Li D et al. | β | 2025 | β |
| Genomic variance partitioning of carcass and meat quality traits in Angus beef cattle. | Baneh H et al. | β | 2025 | β |
| Graph-based deep reinforcement learning for haplotype assembly with Ralphi. | Battistella E et al. | β | 2025 | β |
| GWAS meta-analysis identifies five susceptibility loci for endometrial cancer. | Ramachandran D et al. | β | 2025 | β |
| GWAS Procedures for Gene Mapping in Diverse Populations With Complex Structures. | Zuo Z et al. | β | 2025 | β |
| Haplotype-resolved genomes provide insights into the origins and functional significance of genome diversity in bivalves. | Liu S et al. | β | 2025 | β |
| Heterogeneity and evolution of DNA mutation rates in microsatellite stable colorectal cancer. | Grassi E et al. | β | 2025 | β |
| How admixed captive breeding populations could be rescued using local ancestry information. | Lawson DJ et al. | β | 2025 | β |
| HPTAS: An Alignment-Free Haplotype Phasing Algorithm Focused on Allele-Specific Studies Using Transcriptome Data. | Wang J et al. | β | 2025 | β |
| Hybrid Origin of Alpaca (Vicugna pacos) During Domestication of Camelids in the Mid-Holocene. | Wang Z et al. | β | 2025 | β |
| Identifying candidate genetic variants for egg number by analyzing over 1,000 fully sequenced layers. | Ni A et al. | β | 2025 | β |
| Improving genomic prediction in pigs by integrating multi-population data and prior knowledge. | Wang J et al. | β | 2025 | β |
| Imputef: imputation of polyploid genotype classes and allele frequencies. | Paril J et al. | β | 2025 | β |
| Independent Mutations in the <i>LRP2</i> Gene Mediating Telescope Eyes and Celestial Eyes in Goldfish. | Li R et al. | β | 2025 | β |
| Integrated genome-wide association studies, meta-analysis, and Bayesian fine mapping reveal novel quantitative trait loci's and functional candidate genes for vulva traits in large white pigs. | Zhou J et al. | β | 2025 | β |
| Integrating large-scale meta-analysis of genome-wide association studies improve the genomic prediction accuracy for combined pig populations. | Cai X et al. | β | 2025 | β |
| Integrative multi-environmental genomic prediction in apple. | Jung M et al. | β | 2025 | β |
| Investigation of selection signatures of dairy goats using whole-genome sequencing data. | Peng W et al. | β | 2025 | β |
| KBeagle: An Adaptive Strategy and Tool for Improving Imputation Accuracy and Computation Time. | Guo X et al. | β | 2025 | β |
| Large-scale GWAS of strabismus identifies risk loci and provides support for a link with maternal smoking. | He W et al. | β | 2025 | β |
| Large-scale metabolomic landscape of edible maize reveals convergent changes in metabolite differentiation and facilitates its breeding improvement. | Li C et al. | β | 2025 | β |
| Leveraging Automated Machine Learning for Environmental Data-Driven Genetic Analysis and Genomic Prediction in Maize Hybrids. | He K et al. | β | 2025 | β |
| Leveraging the enrichment analysis from a genome-wide association study against epilepsy-focusing on the role of tryptophan catabolites pathway in patients with drug-resistant epilepsy. | Chang AYW et al. | β | 2025 | β |
| Local adaptation to climate has facilitated the global invasion of cheatgrass. | Gamba D et al. | β | 2025 | β |
| Mapping Species Birth Across the Recombination Landscapes of Marine Snails. | Giles EC et al. | β | 2025 | β |
| Medieval genomes from eastern Iberia illuminate the role of Morisco mass deportations in dismantling a long-standing genetic bridge with North Africa. | Oteo-Garcia G et al. | β | 2025 | β |
| Methods for Chromosome-Scale Haplotype Reconstruction. | Garg S | β | 2025 | β |
| Missing genotype imputation in non-model species using self-organizing maps. | Mora-MΓ‘rquez F et al. | β | 2025 | β |
| Modeling plant phenotypic plasticity and its underlying genetic architecture: a comparative study. | Arenas S et al. | β | 2025 | β |
| Molecular dissection of the genetic architecture of phenology underlying Lupinus hispanicus early flowering and adaptation to winter- or spring sowing. | Bielski W et al. | β | 2025 | β |
| Molecular Portraits of Social Adversity in Breast Cancer: Neighborhood Disadvantage Is Associated with Epigenetic Deregulation of Key Oncogenic Pathways. | Telonis AG et al. | β | 2025 | β |
| MultiCook: A Tool That Improves Accuracy of HLA Imputation by Combining Probabilities From Multiple Reference Panels and Methods. | Kim H et al. | β | 2025 | β |
| Multiple association studies identify 3 novel candidate genes for teat number trait in Danish Landrace and Large White pigs: BRINP3, LIN52, and UBE3B. | Qiu Z et al. | β | 2025 | β |
| Multiple, Single Trait GWAS and Supervised Machine Learning Reveal the Genetic Architecture of Fraxinus excelsior Tolerance to Ash Dieback in Europe. | Doonan JM et al. | β | 2025 | β |
| Multiple strategies association revealed functional candidate FASN gene for fatty acid composition in cattle. | Zhu B et al. | β | 2025 | β |
| Novel genetic association with migratory diapause in Australian monarch butterflies. | Hemstrom W et al. | β | 2025 | β |
| Parallel and convergent evolution in genes underlying seasonal migration. | Zamudio-BeltrΓ‘n LE et al. | β | 2025 | β |
| Parallel Selection in Domesticated Atlantic Salmon from Divergent Founders Including on Whole-Genome Duplication-derived Homeologous Regions. | Buso P et al. | β | 2025 | β |
| Partially connected neural networks for complex trait prediction: application to human height. | Weng H et al. | β | 2025 | β |
| Polygenic and pharmacogenomic contributions to medication dosing: a real-world longitudinal biobank study. | Kasela S et al. | β | 2025 | β |
| Polygenic Risk Score Combined with Transcranial Sonography Refines Parkinson's Disease Risk Prediction. | Kals M et al. | β | 2025 | β |
| Population structure, selection signal and introgression of gamecocks revealed by whole genome sequencing. | Xu N et al. | β | 2025 | β |
| PotatoMASH is a cost-effective marker system for genomic prediction in potato based on short-read haplotypes. | Vexler L et al. | β | 2025 | β |
| Potential Adaptive Introgression From Dogs in Iberian Grey Wolves (Canis lupus). | Sarabia C et al. | β | 2025 | β |
| Progress and innovations of gene cloning in wheat and its close relatives. | KorchanovΓ‘ Z et al. | β | 2025 | β |
| Quantifying the effects of computational filter criteria on the accurate identification of de novo mutations at varying levels of sequencing coverage. | Milhaven M et al. | β | 2025 | β |
| Rare variants and founder effect in the Beauce region of Quebec. | Gagnon M et al. | β | 2025 | β |
| Recessive genetic contribution to congenital heart disease in 5,424 probands. | Dong W et al. | β | 2025 | β |
| Reconstruction of the X and Y haplotypes in the genetically improved Abbassa nile tilapia genome assembly. | Etherington G et al. | β | 2025 | β |
| Recurrent Hybridisations During Diversification of One Rhododendron Species Complex. | Wang J et al. | β | 2025 | β |
| ResynPy: a software for selecting pairs of complementary inbred lines to resynthesize valuable heterozygous genotypes. | Alexiou KG et al. | β | 2025 | β |
| Selection signatures in Gir and Holstein cattle. | Braga LG et al. | β | 2025 | β |
| Sequence-based GWAS in 180,000 German Holstein cattle reveals new candidate variants for milk production traits. | KriΕΎanac AM et al. | β | 2025 | β |
| Single-variant genome-wide association study and regional heritability mapping of protein efficiency and performance traits in Large White pigs. | Ewaoluwagbemiga EO et al. | β | 2025 | β |
| Telomere-to-telomere, gap-free genome of mung bean (<i>Vigna radiata</i>) provides insights into domestication under structural variation. | Jia KH et al. | β | 2025 | β |
| The draft genome of the Wisconsin Miniature SwineTM, a valuable biomedical research tool. | Veith AC et al. | β | 2025 | β |
| The Genome of Lolium multiflorum Reveals the Genetic Architecture of Paraquat Resistance. | Brunharo CA et al. | β | 2025 | β |
| Toward minimal SNP sets for record-matching with CODIS STR profiles. | Gjorgjieva T et al. | β | 2025 | β |
| Trait mapping differentiates loci influencing spike and flag leaf glaucousness in wheat. | Miller D et al. | β | 2025 | β |
| Transcriptional Reprogramming and Allelic Variation in Pleiotropic QTL Regulates Days to Flowering and Growth Habit in Pigeonpea. | Kumar K et al. | β | 2025 | β |
| Transposable elements are vectors of recurrent transgenerational epigenetic inheritance. | Baduel P et al. | β | 2025 | β |
| Understanding the genetic basis of heat stress tolerance in wheat (Triticum aestivum L.) through genome-wide association studies. | Gudi S et al. | β | 2025 | β |
| Unexpectedly low recombination rates and presence of hotspots in termite genomes. | Everitt T et al. | β | 2025 | β |
| Variability of transposable elements in six genetic isolates from North-Eastern Italy and their relationship with alcohol consumption, tobacco use and BMI. | Modenini G et al. | β | 2025 | β |
| Whole exome sequencing shows novel COL4A3 and COL4A4 variants as causes of Alport syndrome in Rio Grande do Norte, Brazil. | de AraΓΊjo WC et al. | β | 2025 | β |
| Whole-genome analysis reveals genetic diversity and selection pressure in Sichuan donkey. | Li C et al. | β | 2025 | β |
| Whole genome and transcriptome analyses identify genetic markers associated with growth traits in Qinchuan black pig. | Wang Y et al. | β | 2025 | β |
| Whole Genome Insights into Genetic Diversity, Introgression, and Adaptation of Hunan Cattle. | Li Y et al. | β | 2025 | β |
| Whole genome insights into genetic diversity, introgression, and adaptation of Yunnan indigenous cattle of Southwestern China. | Guan X et al. | β | 2025 | β |
| Whole-Genome Resequencing Analysis of Athletic Traits in Grassland-Thoroughbred. | Ding W et al. | β | 2025 | β |
| Whole-genome Sequence Analysis Revealed Novel Subjective Cognitive Decline-associated Genes in 10,763 Chinese. | Wang M et al. | β | 2025 | β |
| Whole-genome sequencing identifies genetic diversity and adaptive signatures of hypoxia and ultraviolet radiation in Chinese chickens. | Bello SF et al. | β | 2025 | β |
| Whole-genome sequencing of Tahe red deer (<i>Cervus hanglu yarkandensis</i>) reveals genetic diversity and selection signatures. | Pi T et al. | β | 2025 | β |
| Why usefulness is rarely useful. | Wang F et al. | β | 2025 | β |
| 9,000 years of genetic continuity in southernmost Africa demonstrated at Oakhurst rockshelter. | Gretzinger J et al. | β | 2024 | β |
| Adaptive Evolution of Two Distinct Adaptive Haplotypes of Neanderthal Origin at the Immunoglobulin Heavy-chain Locus in East Asian and European Populations. | Ma X et al. | β | 2024 | β |
| Adaptive introgression of a visual preference gene. | Rossi M et al. | β | 2024 | β |
| A GWAS study highlights significant associations between a series of indels in a FLOWERING LOCUS T gene promoter and flowering time in white lupin (Lupinus albus L.). | Rychel-Bielska S et al. | β | 2024 | β |
| A High-Coverage Mesolithic Aurochs Genome and Effective Leveraging of Ancient Cattle Genomes Using Whole Genome Imputation. | Erven JAM et al. | β | 2024 | β |
| Allelic variability in the Rpp1 locus conferring resistance to Asian soybean rust revealed by genome-wide association. | Aoyagi LN et al. | β | 2024 | β |
| Allopolyploid origin and diversification of the Hawaiian endemic mints. | Tomlin CM et al. | β | 2024 | β |
| A metabolic roadmap of waxy corn flavor. | Luo J et al. | β | 2024 | β |
| Analysis of Gyimes Csango population samples on a high-resolution genome-wide basis. | BΓ‘nfai Z et al. | β | 2024 | β |
| Ancestry dynamics and trait selection in a designer cat breed. | Kaelin CB et al. | β | 2024 | β |
| Ancient genomes illuminate Eastern Arabian population history and adaptation against malaria. | Martiniano R et al. | β | 2024 | β |
| An integrative taxonomy approach reveals Saccharomyces chiloensis sp. nov. as a newly discovered species from Coastal Patagonia. | PeΓ±a TA et al. | β | 2024 | β |
| A novel codominant plumage color pattern of white breast patches in WugangTong geese was controlled by EDNRB2. | Yang Y et al. | β | 2024 | β |
| A novel QTL region for pH and meat color in Duroc pigs. | Molinero E et al. | β | 2024 | β |
| Assessing the limits of local ancestry inference from small reference panels. | Oliveira S et al. | β | 2024 | β |
| Assessment of genome complementarity in three beef-on-dairy crossbreds reveals sire-specific effects on production traits with comparable rates of genomic inbreeding reduction. | Lindtke D et al. | β | 2024 | β |
| Associating CYP2A6 structural variants with ovarian and lung cancer risk in the UK Biobank: replication and extension. | Langlois AWR et al. | β | 2024 | β |
| BUB1B monoallelic germline variants contribute to prostate cancer predisposition by triggering chromosomal instability. | Silva MP et al. | β | 2024 | β |
| Characterization of flag leaf morphology identifies a major genomic region controlling flag leaf angle in the US winter wheat (Triticum aestivum L.). | Kumar P et al. | β | 2024 | β |
| Characterizing genetic variation on the Z chromosome in Schistosoma japonicum reveals host-parasite co-evolution. | Zhou A et al. | β | 2024 | β |
| Combined GWAS and eGWAS reveals the genetic basis underlying drought tolerance in emmer wheat (Triticum turgidum L.). | Yang G et al. | β | 2024 | β |
| Complex Genomic Landscape of Inversion Polymorphism in Europe's Most Destructive Forest Pest. | Mykhailenko A et al. | β | 2024 | β |
| Complex trait susceptibilities and population diversity in a sample of 4,145 Russians. | Usoltsev D et al. | β | 2024 | β |
| Conserved islands of divergence associated with adaptive variation in sockeye salmon are maintained by multiple mechanisms. | Euclide PT et al. | β | 2024 | β |
| Continent-wide genomic analysis of the African buffalo (Syncerus caffer). | Talenti A et al. | β | 2024 | β |
| Cost-effective genomic prediction of critical economic traits in sturgeons through low-coverage sequencing. | Song H et al. | β | 2024 | β |
| CropGS-Hub: a comprehensive database of genotype and phenotype resources for genomic prediction in major crops. | Chen J et al. | β | 2024 | β |
| Cryptic divergences and repeated hybridizations within the endangered "living fossil" dove tree (<i>Davidia involucrata</i>) revealed by whole genome resequencing. | Ren Y et al. | β | 2024 | β |
| Deciphering the Genetic Landscape: Insights Into the Genomic Signatures of Changle Goose. | Chen H et al. | β | 2024 | β |
| Demography-driven and adaptive introgression in a hybrid zone of the Armeria syngameon. | Villa-MachΓo I et al. | β | 2024 | β |
| Ecological genomics in the Northern krill uncovers loci for local adaptation across ocean basins. | Unneberg P et al. | β | 2024 | β |
| Enhancing Across-Population Genomic Prediction for Maize Hybrids. | Yu G et al. | β | 2024 | β |
| Enhancing the potential of phenomic and genomic prediction in winter wheat breeding using high-throughput phenotyping and deep learning. | Kaushal S et al. | β | 2024 | β |
| Evaluating three strategies of genome-wide association analysis for integrating data from multiple populations. | Zhong Z et al. | β | 2024 | β |
| Evaluation of genomic mating approach based on genetic algorithms for long-term selection in Huaxi cattle. | Wang Y et al. | β | 2024 | β |
| Evaluation of genomic prediction considering non-additive genetic effects on fatty acid traits of Japanese Black cattle. | Oyama H et al. | β | 2024 | β |
| Evolution of fast-growing piscivorous herring in the young Baltic Sea. | Goodall J et al. | β | 2024 | β |
| Exploring the genetic basis of resistance to Neopestalotiopsis species in strawberry. | Alam E et al. | β | 2024 | β |
| Exploring the genetic factors behind the discrepancy in resistance to bovine tuberculosis between African zebu cattle and European taurine cattle. | Lee S et al. | β | 2024 | β |
| Gene-Environment Interactions for Parkinson's Disease. | Reynoso A et al. | β | 2024 | β |
| Genetic ancestry in Puerto Rican afro-descendants illustrates diverse histories of African diasporic populations. | Nieves-ColΓ³n MA et al. | β | 2024 | β |
| Genetic and genomic analysis of Belgian Blue's susceptibility for psoroptic mange. | Meyermans R et al. | β | 2024 | β |
| Genetic and T2 biomarkers linked to the efficacy of HDM sublingual immunotherapy in asthma. | Hoof I et al. | β | 2024 | β |
| Genetic association analysis of human median voice pitch identifies a common locus for tonal and non-tonal languages. | Di Y et al. | β | 2024 | β |
| Genetic Associations of Anhedonia: Insights into Overlap of Mental and Somatic Disorders. | Kasyanov E et al. | β | 2024 | β |
| Genetic Background of Blood Ξ²-Hydroxybutyrate Acid Concentrations in Early-Lactating Holstein Dairy Cows Based on Genome-Wide Association Analyses. | Wang Y et al. | β | 2024 | β |
| Genetic basis and expression of ventral colour in polymorphic common lizards. | Recknagel H et al. | β | 2024 | β |
| Genetic basis of ear length in sheep breeds sampled across the region from the Middle East to the Alps. | Klawatsch J et al. | β | 2024 | β |
| Genetic diversity and selection signatures in Hainan black goats revealed by whole-genome sequencing data. | An ZX et al. | β | 2024 | β |
| Genetic diversity, demographic history, and selective signatures of Silkie chicken. | Huang R et al. | β | 2024 | β |
| Genetic drift, historic migration, and limited gene flow contributing to the subpopulation divergence in wild sea beet (Beta vulgaris ssp. maritima (L.) Arcang). | Tehseen MM et al. | β | 2024 | β |
| Genetic liability estimated from large-scale family data improves genetic prediction, risk score profiling, and gene mapping for major depression. | Dybdahl Krebs M et al. | β | 2024 | β |
| Genetic risk factors for Mesoamerican nephropathy. | Friedman DJ et al. | β | 2024 | β |
| Genetics of flight in spongy moths (Lymantria dispar ssp.): functionally integrated profiling of a complex invasive trait. | Blackburn GS et al. | β | 2024 | β |
| Genome analysis reveals three distinct lineages of the cosmopolitan white shark. | Wagner I et al. | β | 2024 | β |
| Genome-wide analysis reveals genomic diversity and signatures of selection in Qinchuan beef cattle. | Yu H et al. | β | 2024 | β |
| Genome-wide association studies in a diverse strawberry collection unveil loci controlling agronomic and fruit quality traits. | MuΓ±oz P et al. | β | 2024 | β |
| Genome-wide association study identified five quantitative trait loci and two candidate genes for digestive traits in Suhuai pigs. | Li K et al. | β | 2024 | β |
| Genome-wide association study of growth traits and validation of key mutations (MSTN c.C861T) associated with the muscle mass of meat pigeons. | Hou H et al. | β | 2024 | β |
| Genome-Wide Association Study on Body Conformation Traits in Xinjiang Brown Cattle. | Zhang M et al. | β | 2024 | β |
| Genome-Wide Association Study with Three Control Cohorts of Japanese Patients with Esotropia and Exotropia of Comitant Strabismus and Idiopathic Superior Oblique Muscle Palsy. | Matsuo T et al. | β | 2024 | β |
| Genome-wide meta-analysis identifies ancestry-specific loci for Alzheimer's disease. | Ge YJ et al. | β | 2024 | β |
| Genomic analyses of withers height and linear conformation traits in German Warmblood horses using imputed sequence-level genotypes. | Reich P et al. | β | 2024 | β |
| Genomic analysis reveals the association of KIT and MITF variants with the white spotting in swamp buffaloes. | Dai D et al. | β | 2024 | β |
| Genomic analysis uncovers novel candidate genes related to adaptation to tropical climates and milk production traits in native goats. | Zhang C et al. | β | 2024 | β |
| Genomic Architecture Predicts Tree Topology, Population Structuring, and Demographic History in Amazonian Birds. | Thom G et al. | β | 2024 | β |
| Genomic changes and stabilization following homoploid hybrid speciation of the Oxford ragwort Senecio squalidus. | Nevado B et al. | β | 2024 | β |
| Genomic inbreeding coefficients using imputation genotypes: Assessing the effect of ancestral genotyping in Holstein-Friesian dairy cows. | Dadousis C et al. | β | 2024 | β |
| Genomic Insights into High-Altitude Adaptation: A Comparative Analysis of <i>Roscoea alpina</i> and <i>R. purpurea</i> in the Himalayas. | Wang YL et al. | β | 2024 | β |
| Genomic insights into local adaptation and phenotypic diversity of Wenchang chickens. | Gu LH et al. | β | 2024 | β |
| Genomic patterns of selection in morphometric traits across diverse Indian cattle breeds. | Rajawat D et al. | β | 2024 | β |
| Genomic prediction and genome-wide association study using combined genotypic data from different genotyping systems: application to apple fruit quality traits. | Minamikawa MF et al. | β | 2024 | β |
| Genomic regions associated with flag leaf and panicle architecture in rice (Oryza sativa L.). | Singh G et al. | β | 2024 | β |
| Global and local ancestry estimation in a captive baboon colony. | Kendall C et al. | β | 2024 | β |
| GWAS and polygenic risk score of severe COVID-19 in Eastern Europe. | Kovalenko E et al. | β | 2024 | β |
| GWAS for identification of genomic regions and candidate genes in vegetable crops. | Nandi S et al. | β | 2024 | β |
| GWAS meta-analysis reveals key risk loci in essential tremor pathogenesis. | Skuladottir AT et al. | β | 2024 | β |
| Haplotype-Based Approach Represents Locus Specificity in the Genomic Diversification Process in Humans (<i>Homo sapiens</i>). | Shimada MK et al. | β | 2024 | β |
| Harnessing landrace diversity empowers wheat breeding. | Cheng S et al. | β | 2024 | β |
| Heritability and genome-wide association study of vaccine-induced immune response in Beagles: A pilot study. | Blake JM et al. | β | 2024 | β |
| Host genetics and gut microbiota synergistically regulate feed utilization in egg-type chickens. | Zhang W et al. | β | 2024 | β |
| Hybrid speciation driven by multilocus introgression of ecological traits. | Rosser N et al. | β | 2024 | β |
| IBD sharing patterns as intra-breed admixture indicators in small ruminants. | Blondeau Da Silva S et al. | β | 2024 | β |
| Identification of genomic diversity and selection signatures in Luxi cattle using whole-genome sequencing data. | Hu M et al. | β | 2024 | β |
| Insights into trait-association of selectionΒ signatures and adaptive eQTL in indigenous African cattle. | Friedrich J et al. | β | 2024 | β |
| Integrated eQTL mapping approach reveals genomic regions regulating candidate genes of the <i>E8-r3</i> locus in soybean. | GΓ©linas BΓ©langer J et al. | β | 2024 | β |
| Integrating genomics, phenomics, and deep learning improves the predictive ability for Fusarium head blight-related traits in winter wheat. | Thapa S et al. | β | 2024 | β |
| Large-scale next generation sequencing based analysis of SLCO1B1 pharmacogenetics variants in the Saudi population. | Goljan E et al. | β | 2024 | β |
| Leveraging large-scale multi-omics evidences to identify therapeutic targets from genome-wide association studies. | Lessard S et al. | β | 2024 | β |
| Local Ancestry at the Major Histocompatibility Complex Region is Not a Major Contributor to Disease Heterogeneity in a Multiethnic Lupus Cohort. | Solomon O et al. | β | 2024 | β |
| <i>C9orf72</i> Repeat Expansion Discordance in 6 Multigenerational Kindreds. | Ryan M et al. | β | 2024 | β |
| Mechanisms of hepatic steatosis in chickens: integrated analysis of the host genome, molecular phenomics and gut microbiome. | Sun C et al. | β | 2024 | β |
| Modeling the effects of consanguinity on autosomal and X-chromosomal runs of homozygosity and identity-by-descent sharing. | Cotter DJ et al. | β | 2024 | β |
| Modification of Huntington's disease by short tandem repeats. | Hong EP et al. | β | 2024 | β |
| Natural variation of domestication-related genes contributed to latitudinal expansion and adaptation in soybean. | Li J et al. | β | 2024 | β |
| New indicators for monitoring genetic diversity applied to alpine brown trout populations using whole genome sequence data. | Kurland S et al. | β | 2024 | β |
| [Online phenotypes of depression symptoms are associated with polygenic risk scores of somatic diseases in a population-based cohort]. | Kibitov AO et al. | β | 2024 | β |
| Pharmacogenetic analysis of structural variation in the 1000 genomes project using whole genome sequences. | Sherman CA et al. | β | 2024 | β |
| Phased nanopore assembly with Shasta and modular graph phasing with GFAse. | Lorig-Roach R et al. | β | 2024 | β |
| Phenotypic Associations With the HMOX1 GT(n) Repeat in European Populations. | Hamilton F et al. | β | 2024 | β |
| Population genomic analysis reveals genetic divergence and adaptation in <i>Brachymystax lenok</i>. | Li P et al. | β | 2024 | β |
| Population-specific putative causal variants shape quantitative traits. | Koyama S et al. | β | 2024 | β |
| Positive selection footprints and haplotype distribution in the genome of dromedary camels. | Bahbahani H et al. | β | 2024 | β |
| Post-invasion selection acts on standing genetic variation despite a severe founding bottleneck. | Dogantzis KA et al. | β | 2024 | β |
| Predicting Functional Consequences of Recent Natural Selection in Britain. | Poyraz L et al. | β | 2024 | β |
| Prediction of the 3D cancer genome from whole-genome sequencing using InfoHiC. | Lee Y et al. | β | 2024 | β |
| Prevalence of actionable pharmacogenetic variants and high-risk drug prescriptions: A Swiss hospital-based cohort study. | Hodel F et al. | β | 2024 | β |
| Rapid Adaptation and Interspecific Introgression in the North American Crop Pest Helicoverpa zea. | North HL et al. | β | 2024 | β |
| Rare variation in non-coding regions with evolutionary signatures contributes to autism spectrum disorder risk. | Shin T et al. | β | 2024 | β |
| scalepopgen: Bioinformatic Workflow Resources Implemented in Nextflow for Comprehensive Population Genomic Analyses. | Upadhyay M et al. | β | 2024 | β |
| Selection scan in Native Americans of Mexico identifies <i>FADS2</i> rs174616: Evidence of gene-diet interactions affecting lipid levels and Delta-6-desaturase activity. | Romero-Hidalgo S et al. | β | 2024 | β |
| Selection signature analysis reveals genes associated with tail phenotype in sheep. | Qi Y et al. | β | 2024 | β |
| Selection Signatures Reveal Candidate Genes for the Cornish Rex Breed-Specific Phenotype. | Zorc M et al. | β | 2024 | β |
| Selective Genotyping and Phenotyping for Optimization of Genomic Prediction Models for Populations with Different Diversity. | Δeran M et al. | β | 2024 | β |
| Sexual selection promotes reproductive isolation in barn swallows. | Schield DR et al. | β | 2024 | β |
| Signatures of adaptation at key insecticide resistance loci in Anopheles gambiae in Southern Ghana revealed by reduced-coverage WGS. | Dennis TPW et al. | β | 2024 | β |
| Signatures of selection analyses reveal genomic differences among three heavy pig breeds that constitute the genetic backbone of a dry-cured ham production system. | Bertolini F et al. | β | 2024 | β |
| The genetic basis of apple shape and size unraveled by digital phenotyping. | Keller B et al. | β | 2024 | β |
| The genomic history and global migration of a windborne pest. | Hu QL et al. | β | 2024 | β |
| The grasshopper genome reveals long-term gene content conservation of the X Chromosome and temporal variation in X Chromosome evolution. | Li X et al. | β | 2024 | β |
| The HLA-DRB1*09:01-DQB1*03:03 haplotype is associated with the risk for late-onset Alzheimer's disease in APOE Ξ΅ 4-negative Japanese adults. | Shigemizu D et al. | β | 2024 | β |
| TWAS facilitates gene-scale trait genetic dissection through gene expression, structural variations, and alternative splicing in soybean. | Li D et al. | β | 2024 | β |
| Unravelling novel and pleiotropic genes for cannon bone circumference and bone mineral density in Yorkshire pigs. | Qiu Z et al. | β | 2024 | β |
| Using blood transcriptome analysis for Alzheimer's disease diagnosis and patient stratification. | Zhong H et al. | β | 2024 | β |
| Variable parallelism in the genomic basis of age at maturity across spatial scales in Atlantic Salmon. | Kess T et al. | β | 2024 | β |
| Weighted single-step genome-wide association study for direct and maternal genetic effects associated with birth and weaning weights in sheep. | Khazaei-Koohpar H et al. | β | 2024 | β |
| Whole-genome analysis reveals distinct adaptation signatures to diverse environments in Chinese domestic pigs. | Wang Z et al. | β | 2024 | β |
| Whole-genome resequencing deciphers patterns of genetic diversity, phylogeny, and evolutionary dynamics in Kashmir cattle. | Ahmed Z et al. | β | 2024 | β |
| Whole-genome resequencing of Japanese large-sized tomato cultivars provides insights into the history of modern breeding. | Yamamoto E et al. | β | 2024 | β |
| Whole-genome resequencing provides insights into the diversity and adaptation to desert environment in Xinjiang Mongolian cattle. | Xu L et al. | β | 2024 | β |
| Whole-genome resequencing reveals diversity and selective signals in the Wuxue goat. | Li C et al. | β | 2024 | β |
| Whole-Genome Resequencing Reveals Genetic Diversity and Wool Trait-Related Genes in Liangshan Semi-Fine-Wool Sheep. | Sun X et al. | β | 2024 | β |
| Whole-genome resequencing uncovers diversity and selective sweep in Kazakh cattle. | Xu L et al. | β | 2024 | β |
| Whole-genome sequencing analysis of soybean diversity across different countries and selection signature of Korean soybean accession. | Cho Y et al. | β | 2024 | β |
| A 21-bp InDel in the promoter of <i>STP1</i> selected during tomato improvement accounts for soluble solid content in fruits. | Wang Y et al. | β | 2023 | β |
| Accurate prediction of quantitative traits with failed SNP calls in canola and maize. | Weber SE et al. | β | 2023 | β |
| Achieving improved accuracy for imputation of ancientΒ DNA. | Ausmees K et al. | β | 2023 | β |
| A complex genomic architecture underlies reproductive isolation in a North American oriole hybrid zone. | Walsh J et al. | β | 2023 | β |
| A Comprehensive Genome-Wide Association Study of Carotenoid and Capsaicinoid Contents in <i>Capsicum chinense</i> Germplasm. | Haile M et al. | β | 2023 | β |
| A deep population reference panel of tandem repeat variation. | Ziaei Jam H et al. | β | 2023 | β |
| Admixture mapping implicates 13q33.3 as ancestry-of-origin locus for Alzheimer disease in Hispanic and Latino populations. | Horimoto ARVR et al. | β | 2023 | β |
| A Genetic Risk Score Distinguishes Different Types of Autoantibody-Mediated Membranous Nephropathy. | Gupta S et al. | β | 2023 | β |
| A genomic estimated breeding value-assisted reduction method of single nucleotide polymorphism sets: a novel approach for determining the cutoff thresholds in genome-wide association studies and best linear unbiased prediction. | Lee YS et al. | β | 2023 | β |
| A Long-Standing Hybrid Population Between Pacific and Atlantic Herring in a Subarctic Fjord of Norway. | Pettersson ME et al. | β | 2023 | β |
| A missense mutation in <i>RRM1</i> contributes to animal tameness. | Dou M et al. | β | 2023 | β |
| Analysis of dog breed diversity using a composite selection index. | Hsu WT et al. | β | 2023 | β |
| Analytical Approaches to Uncover Genetic Associations for Rare Outcomes: Lessons from West Nile Neuroinvasive Disease. | Cahill ME et al. | β | 2023 | β |
| Ancestry-driven metabolite variation provides insights into disease states in admixed populations. | Reynolds KM et al. | β | 2023 | β |
| Ancient DNA from a lost Negev Highlands desert grape reveals a Late Antiquity wine lineage. | Cohen P et al. | β | 2023 | β |
| An efficient exact algorithm for identifying hybrids using population genomic sequences. | Chakraborty S et al. | β | 2023 | β |
| [Anhedonia in mood disorders and somatic diseases: results of exploratory Mendelian randomization analysis]. | Kasyanov ED et al. | β | 2023 | β |
| A spectrum of BRCA1 and BRCA2 germline deleterious variants in ovarian cancer in Russia. | Kechin A et al. | β | 2023 | β |
| Assessing genetic diversity and defining signatures of positive selection on the genome of dromedary camels from the southeast of the Arabian Peninsula. | Al Abri M et al. | β | 2023 | β |
| Assessing Genomic Diversity and Signatures of Selection in Chinese Red Steppe Cattle Using High-Density SNP Array. | Hu M et al. | β | 2023 | β |
| Assessing transcriptomic reidentification risks using discriminative sequence models. | Sadhuka S et al. | β | 2023 | β |
| Balancing selection on the complement system of a wild rodent. | Nandakumar M et al. | β | 2023 | β |
| Biobank-scale inference of ancestral recombination graphs enables genealogical analysis of complex traits. | Zhang BC et al. | β | 2023 | β |
| Breed identification using breed-informative SNPs and machine learning based on whole genome sequence data and SNP chip data. | Zhao C et al. | β | 2023 | β |
| Candidate genes under selection in song sparrows co-vary with climate and body mass in support of Bergmann's Rule. | Carbeck K et al. | β | 2023 | β |
| Comparing Methods to Select Candidates for Re-Genotyping to Impute Higher-Density Genotype Data in a Japanese Black Cattle Population: A Case Study. | Ogawa S et al. | β | 2023 | β |
| Comparison of genomic-enabled cross selection criteria for the improvement of inbred line breeding populations. | Danguy des DΓ©serts A et al. | β | 2023 | β |
| Comprehensive dissection of meiotic DNA double-strand breaks and crossovers in cucumber. | Wang Y et al. | β | 2023 | β |
| Contrasting whole-genome and reduced representation sequencing for population demographic and adaptive inference: an alpine mammal case study. | Martchenko D et al. | β | 2023 | β |
| Convergent genomic signatures of local adaptation across a continental-scale environmental gradient. | Moreira LR et al. | β | 2023 | β |
| Copy number architectures define treatment-mediated selection of lethal prostate cancer clones. | Hasan AMM et al. | β | 2023 | β |
| Deep learning-based polygenic risk analysis for Alzheimer's disease prediction. | Zhou X et al. | β | 2023 | β |
| Development and characterization of a sorghum multi-parent advanced generation intercross (MAGIC) population for capturing diversity among seed parent gene pool. | Kumar N et al. | β | 2023 | β |
| Dissection of the Pearl of Csaba pedigree identifies key genomic segments related to early ripening in grape. | He GQ et al. | β | 2023 | β |
| Estimation of inbreeding, between-breed genomic relatedness and definition of sub-populations in red-pied cattle breeds. | Wilmot H et al. | β | 2023 | β |
| Evaluation of a SNP-STR haplotype panel for forensic genotype imputation. | Chen J et al. | β | 2023 | β |
| Evolutionarily recent retrotransposons contribute to schizophrenia. | Modenini G et al. | β | 2023 | β |
| Exome sequencing of affected duos and trios uncovers PRUNE2 as a novel prostate cancer predisposition gene. | Cardoso M et al. | β | 2023 | β |
| Exploiting public databases of genomic variation to quantify evolutionary constraint on the branch point sequence in 30 plant and animal species. | NoskovΓ‘ A et al. | β | 2023 | β |
| Fast integration and accumulation of beneficial breeding alleles through an AB-NAMIC strategy in wheat. | Jiao C et al. | β | 2023 | β |
| Fine-scale environmentally associated spatial structure of lumpfish (<i>Cyclopterus lumpus</i>) across the Northwest Atlantic. | Langille BL et al. | β | 2023 | β |
| Genetic adaptations to potato starch digestion in the Peruvian Andes. | Jorgensen K et al. | β | 2023 | β |
| Genetic Analysis of Mingrelians Reveals Long-Term Continuity of Populations in Western Georgia (Caucasus). | Schurr TG et al. | β | 2023 | β |
| Genetic and cultural adaptations underlie the establishment of dairy pastoralism in the Tibetan Plateau. | Peng MS et al. | β | 2023 | β |
| Genetic and ecological drivers of molt in a migratory bird. | Contina A et al. | β | 2023 | β |
| Genetic architecture and evolution of color variation in American black bears. | Puckett EE et al. | β | 2023 | β |
| Genetic architecture and polygenic risk score prediction of degenerative suspensory ligament desmitis (DSLD) in the Peruvian Horse. | Momen M et al. | β | 2023 | β |
| Genetic Architecture of Abdominal Fat Deposition Revealed by a Genome-Wide Association Study in the Laying Chicken. | Guo J et al. | β | 2023 | β |
| Genetic architecture of head rice and rice chalky grain percentages using genome-wide association studies. | Sanchez DL et al. | β | 2023 | β |
| Genetic diversity and signatures of selection in four indigenous horse breeds of Iran. | Mousavi SF et al. | β | 2023 | β |
| Genetic gain and inbreeding from simulation of different genomic mating schemes for pig improvement. | Zhao F et al. | β | 2023 | β |
| Genetic Prediction of Lifetime Risk of Fracture. | Ho-Le TP et al. | β | 2023 | β |
| Genetic predictors of lifelong medication-use patterns in cardiometabolic diseases. | Kiiskinen T et al. | β | 2023 | β |
| Genetic swamping of the critically endangered Scottish wildcat was recent and accelerated by disease. | Howard-McCombe J et al. | β | 2023 | β |
| Genome sequencing reveals the genetic architecture of heterostyly and domestication history of common buckwheat. | Fawcett JA et al. | β | 2023 | β |
| Genome-wide analysis emancipates genomic diversity and signature of selection in Altay white-headed cattle of Xinjiang, China. | Chen J et al. | β | 2023 | β |
| Genome-Wide Association Analysis Identifies the <i>PMEL</i> Gene Affecting Coat Color and Birth Weight in Simmental Γ Holstein. | Wang J et al. | β | 2023 | β |
| Genome-wide association studies using multi-models and multi-SNP datasets provide new insights into pasmo resistance in flax. | He L et al. | β | 2023 | β |
| Genome-Wide Association Study for Somatic Skeletal Traits in Duroc Γ (Landrace Γ Yorkshire) Pigs. | Gao X et al. | β | 2023 | β |
| Genome-wide association study in two-row spring barley landraces identifies QTL associated with plantlets root system architecture traits in well-watered and osmotic stress conditions. | Khodaeiaminjan M et al. | β | 2023 | β |
| Genome-wide association study meta-analysis supports association between MUC1 and ectopic pregnancy. | Pujol Gualdo N et al. | β | 2023 | β |
| Genome-Wide Association Study of Egg Production Traits in Shuanglian Chickens Using Whole Genome Sequencing. | Fu M et al. | β | 2023 | β |
| Genome-Wide Association Study of Fiber Diameter in Alpacas. | More M et al. | β | 2023 | β |
| Genome-Wide Association Study Reveals Novel Loci Associated with Body Conformation Traits in Qinchuan Cattle. | Yu H et al. | β | 2023 | β |
| Genome-wide association study reveals that the IBSP locus affects ear size in cattle. | Shen J et al. | β | 2023 | β |
| Genome-wide association study using a single-step approach for teat number in Duroc, Landrace and Yorkshire pigs in Korea. | Park J et al. | β | 2023 | β |
| Genome-wide association with footrot in hair and wool sheep. | Cinar MU et al. | β | 2023 | β |
| Genome-wide DNA methylation analysis implicates enrichment of interferon pathway in African American patients with Systemic Lupus Erythematosus and European Americans with lupus nephritis. | Allen PC et al. | β | 2023 | β |
| Genome-wide identification of copy neutral loss of heterozygosity reveals its possible association with spatial positioning of chromosomes. | Kim H et al. | β | 2023 | β |
| Genome-wide screen of otosclerosis in population biobanks: 27 loci and shared associations with skeletal structure. | RΓ€mΓΆ JT et al. | β | 2023 | β |
| Genome-wide study of linkage disequilibrium, population structure, and inbreeding in Iranian indigenous sheep breeds. | Barani S et al. | β | 2023 | β |
| Genome-wide variation in the Angolan Namib Desert reveals unique pre-Bantu ancestry. | Oliveira S et al. | β | 2023 | β |
| Genomic analysis of Tibetan ground tits identifies molecular adaptations associated with cooperative breeding. | Wang Y et al. | β | 2023 | β |
| Genomic and phenotypic changes associated with alterations of migratory behaviour in a songbird. | Zhang D et al. | β | 2023 | β |
| Genomic evaluation for two-way crossbred performance in cattle. | Mei Q et al. | β | 2023 | β |
| Genomic evidence for adaptation to tuberculosis in the Andes before European contact. | Joseph SK et al. | β | 2023 | β |
| Genomic heritability and correlation between carcass traits in Japanese Black cattle evaluated under different ceilings of relatedness among individuals. | Rostamzadeh Mahdabi E et al. | β | 2023 | β |
| Genomic insight into the influence of selection, crossbreeding, and geography on population structure in poultry. | Wu Z et al. | β | 2023 | β |
| Genomic prediction of hybrid performance in grain sorghum (<i>Sorghum bicolor</i> L.). | Maulana F et al. | β | 2023 | β |
| Genomic selection for salinity tolerance in japonica rice. | BartholomΓ© J et al. | β | 2023 | β |
| Genomic selection for target traits in the Australian lentil breeding program. | Gebremedhin A et al. | β | 2023 | β |
| Genomic selection to improve husk tightness based on genomic molecular markers in maize. | Liu Y et al. | β | 2023 | β |
| Genomics of Secondarily Temperate Adaptation in the Only Non-Antarctic Icefish. | Rivera-ColΓ³n AG et al. | β | 2023 | β |
| Genomic Variation, Population History, and Long-Term Genetic Adaptation to High Altitudes in Tibetan Partridge (Perdix hodgsoniae). | Palacios C et al. | β | 2023 | β |
| Genotyping, characterization, and imputation of known and novel CYP2A6 structural variants using SNP array data. | Langlois AWR et al. | β | 2023 | β |
| Global genetic diversity, introgression, and evolutionary adaptation of indicine cattle revealed by whole genome sequencing. | Chen N et al. | β | 2023 | β |
| GWAS using low-pass whole genome sequence reveals a novel locus in canine congenital idiopathic megaesophagus. | Bell SM et al. | β | 2023 | β |
| Haplotype-based inference of recent effective population size in modern and ancient DNA samples. | Fournier R et al. | β | 2023 | β |
| Haplotype blocks for genomic prediction: a comparative evaluation in multiple crop datasets. | Weber SE et al. | β | 2023 | β |
| Host genetics and gut microbiota jointly regulate blood biochemical indicators in chickens. | Jiang X et al. | β | 2023 | β |
| Hybridisation has shaped a recent radiation of grass-feeding aphids. | Mathers TC et al. | β | 2023 | β |
| Hybridization and divergent climatic preferences drive divergence of two allopatric Gentiana species on the Qinghai-Tibet Plateau. | Fu PC et al. | β | 2023 | β |
| Hybrid origin of a primate, the gray snub-nosed monkey. | Wu H et al. | β | 2023 | β |
| Identification of Genomic Signatures in Bullmastiff Dogs Using Composite Selection Signals Analysis of 23 Purebred Clades. | Hsu WT et al. | β | 2023 | β |
| Identification of leaf rust resistance loci in a geographically diverse panel of wheat using genome-wide association analysis. | Kaur S et al. | β | 2023 | β |
| Identification of Markers Associated with Wheat Dwarf Virus (WDV) Tolerance/Resistance in Barley (<i>Hordeum vulgare</i> ssp. <i>vulgare</i>) Using Genome-Wide Association Studies. | Soleimani B et al. | β | 2023 | β |
| Identifying Candidate Genes for Litter Size and Three Morphological Traits in Youzhou Dark Goats Based on Genome-Wide SNP Markers. | Sun X et al. | β | 2023 | β |
| Improving Genomic Prediction Accuracy in the Chinese Holstein Population by Combining with the Nordic Holstein Reference Population. | Zhang Z et al. | β | 2023 | β |
| Imputation of ancient human genomes. | Sousa da Mota B et al. | β | 2023 | β |
| Inferring the population history of Kyrgyz in Xinjiang, Northwest China from genome-wide array genotyping. | Halili B et al. | β | 2023 | β |
| Integrated study of systemic and local airway transcriptomes in asthma reveals causal mediation of systemic effects by airway key drivers. | Zhang L et al. | β | 2023 | β |
| Interchromosomal linkage disequilibrium and linked fitness cost loci associated with selection for herbicide resistance. | Gupta S et al. | β | 2023 | β |
| Intercross population study reveals that co-mutation of <i>mitfa</i> genes in two subgenomes induces red skin color in common carp ( <i>Cyprinus carpio wuyuanensis</i>). | Li BJ et al. | β | 2023 | β |
| Interrogating the Human Diplome: Computational Methods, Emerging Applications, and Challenges. | Chan AP et al. | β | 2023 | β |
| Invited review: Good practices in genome-wide association studies to identify candidate sequence variants in dairy cattle. | Sahana G et al. | β | 2023 | β |
| Large-Scale Chromosomal Changes Lead to Genome-Level Expression Alterations, Environmental Adaptation, and Speciation in the Gayal (Bos frontalis). | Li Y et al. | β | 2023 | β |
| Limited Song Mixing Without Genomic Gene Flow in a Contact Zone Between Two Songbird Species. | Wu L et al. | β | 2023 | β |
| Local ancestry and selection in admixed Sanjiang cattle. | Lyu Y et al. | β | 2023 | β |
| MaLAdapt Reveals Novel Targets of Adaptive Introgression From Neanderthals and Denisovans in Worldwide Human Populations. | Zhang X et al. | β | 2023 | β |
| Mapping and Functional Dissection of the Rumpless Trait in Piao Chicken Identifies a Causal Loss of Function Mutation in the Novel Gene Rum. | Guo Y et al. | β | 2023 | β |
| Mapping of a soybean rust resistance in PI 594756 at the <i>Rpp1</i> locus. | Barros LG et al. | β | 2023 | β |
| Mating allocations in Holstein combining genomic information and linear programming optimization at the herd level. | Bengtsson C et al. | β | 2023 | β |
| Mexican Biobank advances population and medical genomics of diverse ancestries. | Sohail M et al. | β | 2023 | β |
| Molecular characterization of doubled haploid lines derived from different cycles of the Iowa Stiff Stalk Synthetic (BSSS) maize population. | Ledesma A et al. | β | 2023 | β |
| Multi-trait genomic selection improves the prediction accuracy of end-use quality traits in hard winter wheat. | Gill HS et al. | β | 2023 | β |
| Native American genetic ancestry and pigmentation allele contributions to skin color in a Caribbean population. | Ang KC et al. | β | 2023 | β |
| Natural disease history of a canine model of oligogenic RPGRIP1-cone-rod dystrophy establishes variable effects of previously and newly mapped modifier loci. | Ripolles-Garcia A et al. | β | 2023 | β |
| New insights into trait introgression with the look-ahead intercrossing strategy. | Ni Z et al. | β | 2023 | β |
| On the origin and structure of haplotype blocks. | Shipilina D et al. | β | 2023 | β |
| Pharmacogenetic Variation in Neanderthals and Denisovans and Implications for Human Health and Response to Medications. | Wroblewski TH et al. | β | 2023 | β |
| PharmVar GeneFocus: SLCO1B1. | Ramsey LB et al. | β | 2023 | β |
| Phenomic and genomic prediction of yield on multiple locations in winter wheat. | Jackson R et al. | β | 2023 | β |
| Plasticity QTLs specifically contribute to the genotype Γ water availability interaction in maize. | Djabali Y et al. | β | 2023 | β |
| Population genomics identifies genetic signatures of carrot domestication and improvement and uncovers the origin of high-carotenoid orange carrots. | Coe K et al. | β | 2023 | β |
| Potential selection for lipid kinase activity and spermatogenesis in Henan native pig breeds and growth shaping by introgression of European genes. | Qiao R et al. | β | 2023 | β |
| Preselection of QTL markers enhances accuracy of genomic selection in Norway spruce. | Chen ZQ et al. | β | 2023 | β |
| Protocol to analyze population structure and migration history based on human genome variation data. | Zhao Z et al. | β | 2023 | β |
| Recurrent selection and reduction in recombination shape the genomic landscape of divergence across multiple population pairs of Green-backed Tit. | Jiang Z et al. | β | 2023 | β |
| Refphase: Multi-sample phasing reveals haplotype-specific copy number heterogeneity. | Watkins TBK et al. | β | 2023 | β |
| Review: Computational analysis of human skeletal remains in ancient DNA and forensic genetics. | Childebayeva A et al. | β | 2023 | β |
| Robust SNP-based prediction of rheumatoid arthritis through machine-learning-optimized polygenic risk score. | Lim AJW et al. | β | 2023 | β |
| Selection and adaptive introgression guided the complex evolutionary history of the European common bean. | Bellucci E et al. | β | 2023 | β |
| Single nucleotide polymorphisms rs148582811 regulates its host gene <i>ARVCF</i> expression to affect nicotine-associated hippocampus-dependent memory. | Yang Z et al. | β | 2023 | β |
| Sister haplotypes and recombination disequilibrium: a new approach to identify associations of haplotypes with complex diseases. | Liao SY et al. | β | 2023 | β |
| Subtle Introgression Footprints at the End of the Speciation Continuum in a Clade of Heliconius Butterflies. | Rougemont Q et al. | β | 2023 | β |
| The genetic and evolutionary basis of gene expression variation in East Africans. | Kelly DE et al. | β | 2023 | β |
| The genetic history of the Southern Andes from present-day Mapuche ancestry. | Arango-Isaza E et al. | β | 2023 | β |
| The genomic analysis of current-day North African populations reveals the existence of trans-Saharan migrations with different origins and dates. | Lucas-SΓ‘nchez M et al. | β | 2023 | β |
| The genomic characteristics affect phenotypic diversity from the perspective of genetic improvement of economic traits. | Chu J et al. | β | 2023 | β |
| The idiosyncratic genome of Korean long-tailed chicken as a valuable genetic resource. | Youm DJ et al. | β | 2023 | β |
| The parasitic nematode Strongyloides ratti exists predominantly as populations of long-lived asexual lineages. | Cole R et al. | β | 2023 | β |
| Three amphioxus reference genomes reveal gene and chromosome evolution of chordates. | Huang Z et al. | β | 2023 | β |
| To stripe or not to stripe: the origin of a novel foliar pigmentation pattern in monkeyflowers (Mimulus). | LaFountain AM et al. | β | 2023 | β |
| Traces of Introgression from cAus into Tropical Japonica Observed in African Upland Rice Varieties. | Beye A et al. | β | 2023 | β |
| Trans-ancestry meta-analysis of genome wide association studies of inhibitory control. | Arnatkeviciute A et al. | β | 2023 | β |
| Transcriptome brings variations of gene expression, alternative splicing, and structural variations into gene-scale trait dissection in soybean | Li D et al. | β | 2023 | β |
| Tutorial: a statistical genetics guide to identifying HLA alleles driving complex disease. | Sakaue S et al. | β | 2023 | β |
| Using machine learning to realize genetic site screening and genomic prediction of productive traits in pigs. | Xiang T et al. | β | 2023 | β |
| Utilization of a publicly available diversity panel in genomic prediction of Fusarium head blight resistance traits in wheat. | Winn ZJ et al. | β | 2023 | β |
| Whole Genome Resequencing Revealed the Genetic Relationship and Selected Regions among Baicheng-You, Beijing-You, and European-Origin Broilers. | Yang K et al. | β | 2023 | β |
| Whole-genome sequencing reveals fine-scale environment-associated divergence near the range limits of a temperate reef fish. | Nugent CM et al. | β | 2023 | β |
| ABO genotype alters the gut microbiota by regulating GalNAc levels in pigs. | Yang H et al. | β | 2022 | β |
| Accurate genome-wide phasing from IBD data. | Noto K et al. | β | 2022 | β |
| A chromosomal inversion may facilitate adaptation despite periodic gene flow in a freshwater fish. | Thorstensen MJ et al. | β | 2022 | β |
| A chromosome-level genome of the human blood fluke Schistosoma japonicum identifies the genomic basis of host-switching. | Luo F et al. | β | 2022 | β |
| A comparative analysis of current phasing and imputation software. | De Marino A et al. | β | 2022 | β |
| Adaptation and Cryptic Pseudogenization in Penguin Toll-Like Receptors. | Fiddaman SR et al. | β | 2022 | β |
| A divide-and-conquer approach for genomic prediction in rubber tree using machine learning. | Aono AH et al. | β | 2022 | β |
| Advancing our understanding of genetic risk factors and potential personalized strategies for pelvic organ prolapse. | Pujol-Gualdo N et al. | β | 2022 | β |
| A further look at quantitative trait loci for growth and fatness traits in a White DurocβΓβErhualian F<sub>3</sub> intercross population. | Deng Z et al. | β | 2022 | β |
| Age Estimate of <i>GJB2</i>-p.(Arg143Trp) Founder Variant in Hearing Impairment in Ghana, Suggests Multiple Independent Origins across Populations. | Aboagye ET et al. | β | 2022 | β |
| A high-density genome-wide association with absolute blood monocyte count in domestic sheep identifies novel loci. | Oliveira RD et al. | β | 2022 | β |
| A joint use of pooling and imputation for genotyping SNPs. | Clouard C et al. | β | 2022 | β |
| A large deletion at the cortex locus eliminates butterfly wing patterning. | Hanly JJ et al. | β | 2022 | β |
| A machine learning model using SNPs obtained from a genome-wide association study predicts the onset of vincristine-induced peripheral neuropathy. | Yamada H et al. | β | 2022 | β |
| A major-effect genetic locus, ApRVII, controlling resistance against both adapted and non-adapted aphid biotypes in pea. | Ollivier R et al. | β | 2022 | β |
| A natural uORF variant confers phosphorus acquisition diversity in soybean. | Guo Z et al. | β | 2022 | β |
| Ancient Maltese genomes and the genetic geography of Neolithic Europe. | Ariano B et al. | β | 2022 | β |
| An empirical evaluation of genotype imputation of ancient DNA. | Ausmees K et al. | β | 2022 | β |
| A new strategy for using historical imbalanced yield data to conduct genome-wide association studies and develop genomic prediction models for wheat breeding. | Chu C et al. | β | 2022 | β |
| An identical-by-descent segment harbors a 12-bp insertion determining fruit softening during domestication and speciation in Pyrus. | Song B et al. | β | 2022 | β |
| An integrative skeletal and paleogenomic analysis of stature variation suggests relatively reduced health for early European farmers. | Marciniak S et al. | β | 2022 | β |
| A pan-Zea genome map for enhancing maize improvement. | Gui S et al. | β | 2022 | β |
| A Pipeline for Phasing and Genotype Imputation on Mixed Human Data (Parents-Offspring Trios and Unrelated Subjects) by Reviewing Current Methods and Software. | Baldrighi GN et al. | β | 2022 | β |
| A potential early clinical phenotype of necrotizing meningoencephalitis in genetically at-risk pug dogs. | Windsor R et al. | β | 2022 | β |
| Arctic introgression and chromatin regulation facilitated rapid Qinghai-Tibet Plateau colonization by an avian predator. | Hu L et al. | β | 2022 | β |
| Assessing accuracy of genotype imputation in the Afrikaner and Brahman cattle breeds of South Africa. | Mdyogolo S et al. | β | 2022 | β |
| Assessing the Role of Ancestral Fragments and Selection Signatures by Whole-Genome Scanning in Dehong Humped Cattle at the China-Myanmar Border. | Luo X et al. | β | 2022 | β |
| Assessment of genotyping array performance for genome-wide association studies and imputation in African cattle. | Riggio V et al. | β | 2022 | β |
| Association of SPI1 Haplotypes with Altered SPI1 Gene Expression and Alzheimer's Disease Risk. | Cao H et al. | β | 2022 | β |
| A unified genealogy of modern and ancient genomes. | Wohns AW et al. | β | 2022 | β |
| Bayesian optimization of multivariate genomic prediction models based on secondary traits for improved accuracy gains and phenotyping costs. | Hamazaki K et al. | β | 2022 | β |
| Benchmarking phasing software with a whole-genome sequenced cattle pedigree. | Oget-Ebrad C et al. | β | 2022 | β |
| Between a Rock and a Hard Polytomy: Phylogenomics of the Rock-Dwelling Mbuna Cichlids of Lake MalaΕ΅i. | Scherz MD et al. | β | 2022 | β |
| Chromosomal genome and population genetic analyses to reveal genetic architecture, breeding history and genes related to cadmium accumulation in Lentinula edodes. | Yu H et al. | β | 2022 | β |
| Chromosome-level genome sequence of the Genetically Improved Farmed Tilapia (GIFT, Oreochromis niloticus) highlights regions of introgression with O. mossambicus. | Etherington GJ et al. | β | 2022 | β |
| Chromosome-scale assembly and whole-genome sequencing of 266 giant panda roundworms provide insights into their evolution, adaptation and potential drug targets. | Han L et al. | β | 2022 | β |
| ClinPharmSeq: A targeted sequencing panel for clinical pharmacogenetics implementation. | Lee SB et al. | β | 2022 | β |
| Combining genetic resources and elite material populations to improve the accuracy of genomic prediction in apple. | Cazenave X et al. | β | 2022 | β |
| Combining NDVI and Bacterial Blight Score to Predict Grain Yield in Field Pea. | Zhao H et al. | β | 2022 | β |
| Comparative Population Genomics of Cryptic Speciation and Adaptive Divergence in Bicknell's and Gray-Cheeked Thrushes (Aves: Catharus bicknelli and Catharus minimus). | Termignoni-Garcia F et al. | β | 2022 | β |
| Comparison of the genetic characteristics of directly measured and Fourier-transform mid-infrared-predicted bovine milk fatty acids and proteins. | Tiplady KM et al. | β | 2022 | β |
| Comprehensive genome-wide association study of different forms of hernia identifies more than 80 associated loci. | Fadista J et al. | β | 2022 | β |
| Concerted variation in melanogenesis genes underlies emergent patterning of plumage in capuchino seedeaters. | Estalles C et al. | β | 2022 | β |
| Contribution of schizophrenia polygenic burden to longitudinal phenotypic variance in 22q11.2 deletion syndrome. | Alver M et al. | β | 2022 | β |
| Cost-effectively dissecting the genetic architecture of complex wool traits in rabbits by low-coverage sequencing. | Wang D et al. | β | 2022 | β |
| Data Integration, Imputation, and Meta-analysis for Genome-Wide Association Studies. | Joukhadar R et al. | β | 2022 | β |
| Deciphering the Polygenic Basis of Racial Disparities in Prostate Cancer By an Integrative Analysis of Genomic and Transcriptomic Data. | Zhang W et al. | β | 2022 | β |
| Decoding the diversity of killer immunoglobulin-like receptors by deep sequencing and a high-resolution imputation method. | Sakaue S et al. | β | 2022 | β |
| Development and validation of a horse reference panel for genotype imputation. | Reich P et al. | β | 2022 | β |
| distAngsd: Fast and Accurate Inference of Genetic Distances for Next-Generation Sequencing Data. | Zhao L et al. | β | 2022 | β |
| Do Biobank Recall Studies Matter? Long-Term Follow-Up of Research Participants With Familial Hypercholesterolemia. | Nurm M et al. | β | 2022 | β |
| Early onset adult deafness in the Rhodesian Ridgeback dog is associated with an in-frame deletion in the EPS8L2 gene. | Kawakami T et al. | β | 2022 | β |
| Ecological Speciation Promoted by Divergent Regulation of Functional Genes Within African Cichlid Fishes. | Carruthers M et al. | β | 2022 | β |
| Equus roundworms (Parascaris univalens) are undergoing rapid divergence while genes involved in metabolic as well as anthelminic resistance are under positive selection. | Han L et al. | β | 2022 | β |
| Estimating the genome-wide mutation rate from thousands of unrelated individuals. | Tian X et al. | β | 2022 | β |
| Estimating the time since admixture from phased and unphased molecular data. | Janzen T et al. | β | 2022 | β |
| Exploring the diversity and genetic structure of the U.S. National Cultivated Strawberry Collection. | Zurn JD et al. | β | 2022 | β |
| Extensive genome introgression between domestic ferret and European polecat during population recovery in Great Britain. | Etherington GJ et al. | β | 2022 | β |
| Extreme variation in recombination rate and genetic diversity along the Sylvioidea neo-sex chromosome. | Ponnikas S et al. | β | 2022 | β |
| Fine Mapping of a Major Backfat QTL Reveals a Causal Regulatory Variant Affecting the <i>CCND2</i> Gene. | Oliveira HC et al. | β | 2022 | β |
| First genomic prediction and genome-wide association for complex growth-related traits in Rock Bream (<i>Oplegnathus fasciatus</i>). | Gong J et al. | β | 2022 | β |
| flopp: Extremely Fast Long-Read Polyploid Haplotype Phasing by Uniform Tree Partitioning. | Shaw J et al. | β | 2022 | β |
| Functional coding haplotypes and machine-learning feature elimination identifies predictors of Methotrexate Response in Rheumatoid Arthritis patients. | Lim AJW et al. | β | 2022 | β |
| Functional genomics analysis reveals the evolutionary adaptation and demographic history of pygmy lorises. | Li ML et al. | β | 2022 | β |
| Genetic analysis of sucrose concentration in soybean seeds using a historical soybean genomic panel. | Ficht A et al. | β | 2022 | β |
| Genetic architecture and genomic predictive ability of apple quantitative traits across environments. | Jung M et al. | β | 2022 | β |
| Genetic association and Mendelian randomization for hypothyroidism highlight immune molecular mechanisms. | Mathieu S et al. | β | 2022 | β |
| Genetic associations at regulatory phenotypes improve fine-mapping of causal variants for 12 immune-mediated diseases. | Kundu K et al. | β | 2022 | β |
| Genetic characterization of populations in the Marquesas Archipelago in the context of the Austronesian expansion. | TΓ€tte K et al. | β | 2022 | β |
| Genetic diversity and population structure of six autochthonous pig breeds from Croatia, Serbia, and Slovenia. | Zorc M et al. | β | 2022 | β |
| Genetic diversity and selection signatures of four indigenous pig breeds from eastern China. | Chen Z et al. | β | 2022 | β |
| Genetic diversity and signatures of selection for heat tolerance and immune response in Iranian native chickens. | Asadollahpour Nanaei H et al. | β | 2022 | β |
| Genetic structure and domestication footprints of the tusk, coat color, and ear morphology in East Chinese pigs. | Zheng S et al. | β | 2022 | β |
| Genetic Variants and Haplotypes of TOMM40, APOE, and APOC1 are Related to the Age of Onset of Late-onset Alzheimer Disease in a Colombian Population. | Ortega-Rojas J et al. | β | 2022 | β |
| Genome sequencing reveals evidence of adaptive variation in the genus Zea. | Chen L et al. | β | 2022 | β |
| Genome-wide analysis of Schistosoma mansoni reveals limited population structure and possible praziquantel drug selection pressure within Ugandan hot-spot communities. | Vianney TJ et al. | β | 2022 | β |
| Genome-wide association analysis and replication in 810,625 individuals with varicose veins. | Ahmed WU et al. | β | 2022 | β |
| Genome-wide association studies of metabolites in Finnish men identify disease-relevant loci. | Yin X et al. | β | 2022 | β |
| Genome-wide association study identifies quantitative trait loci affecting cattle temperament. | Shen JF et al. | β | 2022 | β |
| Genome-wide association study in a rat model of temperament identifies multiple loci for exploratory locomotion and anxiety-like traits. | Chitre AS et al. | β | 2022 | β |
| Genome wide association study of frost tolerance in wheat. | Soleimani B et al. | β | 2022 | β |
| Genome-Wide Association Study Revealed the Effect of rs312715211 in <i>ZNF652</i> Gene on Abdominal Fat Percentage of Chickens. | Zhu Y et al. | β | 2022 | β |
| Genomic adaptation of Ethiopian indigenous cattle to high altitude. | Terefe E et al. | β | 2022 | β |
| Genomic Analyses for Selective Signatures and Genes Involved in Hot Adaptation Among Indigenous Chickens From Different Tropical Climate Regions. | Xu NY et al. | β | 2022 | β |
| Genomic Diversity Profiling and Breed-Specific Evolutionary Signatures of Selection in Arunachali Yak. | Kour A et al. | β | 2022 | β |
| Genomic evaluation and genome-wide association studies for total number of teats in a combined American and Danish Yorkshire pig populations selected in China. | Fang F et al. | β | 2022 | β |
| Genomic evidence of recent European introgression into North American farmed and wild Atlantic salmon. | Bradbury IR et al. | β | 2022 | β |
| Genomic insight into genetic changes and shaping of major inbred rice cultivars in China. | Ye J et al. | β | 2022 | β |
| Genomic insights into historical improvement of heterotic groups during modern hybrid maize breeding. | Li C et al. | β | 2022 | β |
| Genomic insights into the conservation and population genetics of two Chinese native goat breeds. | Wang X et al. | β | 2022 | β |
| Genomic insights on the contribution of introgressions from Xian/Indica to the genetic improvement of Geng/Japonica rice cultivars. | Cui D et al. | β | 2022 | β |
| Genomic prediction for the Germplasm Enhancement of Maize project. | Rogers AR et al. | β | 2022 | β |
| Genomic prediction of cotton fibre quality and yield traits using Bayesian regression methods. | Li Z et al. | β | 2022 | β |
| Genomic selection applications can improve the environmental performance of aquatics: A case study on the heat tolerance of abalone. | Liu J et al. | β | 2022 | β |
| Genomic signatures for drylands adaptation at gene-rich regions in African zebu cattle. | Tijjani A et al. | β | 2022 | β |
| Genomic variation from an extinct species is retained in the extant radiation following speciation reversal. | Frei D et al. | β | 2022 | β |
| Genotype calling and haplotype inference from low coverage sequence data in heterozygous plant genome using HetMap. | Gong H et al. | β | 2022 | β |
| Genotypic and phenotypic landscapes of 51 pharmacogenes derived from whole-genome sequencing in a Thai population. | Wankaew N et al. | β | 2022 | β |
| Genotyping by Sequencing Advancements in Barley. | Rajendran NR et al. | β | 2022 | β |
| Genotyping by sequencing-based linkage map construction and identification of quantitative trait loci for yield-related traits and oil content in Jatropha (Jatropha curcas L.). | Yepuri V et al. | β | 2022 | β |
| Genotyping, the Usefulness of Imputation to Increase SNP Density, and Imputation Methods and Tools. | Phocas F | β | 2022 | β |
| Globally Relaxed Selection and Local Adaptation in Boechera stricta. | Liang YY et al. | β | 2022 | β |
| GWAS of depression in 4,520 individuals from the Russian population highlights the role of <i>MAGI2</i> (<i>S-SCAM</i>) in the gut-brain axis. | Pinakhina D et al. | β | 2022 | β |
| GWAS of Reproductive Traits in Large White Pigs on Chip and Imputed Whole-Genome Sequencing Data. | Wang X et al. | β | 2022 | β |
| HaploMaker: An improved algorithm for rapid haplotype assembly of genomic sequences. | Fruzangohar M et al. | β | 2022 | β |
| Haplotype mapping uncovers unexplored variation in wild and domesticated soybean at the major protein locus cqProt-003. | Marsh JI et al. | β | 2022 | β |
| High male specific contribution of the X-chromosome to individual global recombination rate in dairy cattle. | Kadri NK et al. | β | 2022 | β |
| HKG: an open genetic variant database of 205 Hong Kong cantonese exomes. | Ou M et al. | β | 2022 | β |
| HLA-disease association and pleiotropy landscape in over 235,000 Finns. | Ritari J et al. | β | 2022 | β |
| HLA imputation and its application to genetic and molecular fine-mapping of the MHC region in autoimmune diseases. | Naito T et al. | β | 2022 | β |
| Human Leukocyte Antigen Fine-Mapping and Correlation Analysis of Han and Minority Leprosy Patients in Southern China. | Li Z et al. | β | 2022 | β |
| Iam hiQ-a novel pair of accuracy indices for imputed genotypes. | Rosenberger A et al. | β | 2022 | β |
| Identification and Validation of Candidate Genes from Genome-Wide Association Studies. | Albert E et al. | β | 2022 | β |
| Identification and Validation of Quantitative Trait Loci for <i>Wheat Dwarf Virus</i> Resistance in Wheat (<i>Triticum</i> spp.). | Pfrieme AK et al. | β | 2022 | β |
| Identification of crucial genes and metabolites regulating the eggshell brownness in chicken. | Yang J et al. | β | 2022 | β |
| Identification of Haplotypes Associated With Resistance to Bacterial Cold Water Disease in Rainbow Trout Using Whole-Genome Resequencing. | Liu S et al. | β | 2022 | β |
| Identification of pharmacogenetic variants from large scale next generation sequencing data in the Saudi population. | Goljan E et al. | β | 2022 | β |
| Impact of linkage disequilibrium heterogeneity along the genome on genomic prediction and heritability estimation. | Ren D et al. | β | 2022 | β |
| Impacts of additive, dominance, and inbreeding depression effects on genomic evaluation by combining two SNP chips in Canadian Yorkshire pigs bred in China. | Mei Q et al. | β | 2022 | β |
| Improving genomic predictions with inbreeding and nonadditive effects in two admixed maize hybrid populations in single and multienvironment contexts. | Roth M et al. | β | 2022 | β |
| Imputation of Ancient Whole Genome <i>Sus scrofa</i> DNA Introduces Biases Toward Main Population Components in the Reference Panel. | Erven JAM et al. | β | 2022 | β |
| Imputation of the major histocompatibility complex region identifies major independent variants associated with bullous pemphigoid and dermatomyositis in Han Chinese. | Fan W et al. | β | 2022 | β |
| Insights into breeding history, hotspot regions of selection, and untapped allelic diversity for bread wheat breeding. | Lehnert H et al. | β | 2022 | β |
| Insights into the Genetic Architecture and Genomic Prediction of Powdery Mildew Resistance in Flax (<i>Linum usitatissimum</i> L.). | You FM et al. | β | 2022 | β |
| Integrating genome-wide association mapping of additive and dominance genetic effects to improve genomic prediction accuracy in Eucalyptus. | Tan B et al. | β | 2022 | β |
| Joint inference of ancestry and genotypes of parents from children. | Zhang Y et al. | β | 2022 | β |
| Karyotype variation, spontaneous genome rearrangements affecting chemical insensitivity, and expression level polymorphisms in the plant pathogen Phytophthora infestans revealed using its first chromosome-scale assembly. | Matson MEH et al. | β | 2022 | β |
| Large-scale association study on daily weight gain in pigs reveals overlap of genetic factors for growth in humans. | Cai Z et al. | β | 2022 | β |
| Late Pleistocene-dated divergence between South Hemisphere populations of the non-conventional yeast L. cidri. | Villarreal P et al. | β | 2022 | β |
| Lost pigs of Angola: Whole genome sequencing reveals unique regions of selection with emphasis on metabolism and feed efficiency. | SΓ‘ P et al. | β | 2022 | β |
| Low-density SNP panel for efficient imputation and genomic selection of milk production and technological traits in dairy sheep. | Marina H et al. | β | 2022 | β |
| Mapping of partial resistance to Phytophthora sojae in soybean PIs using whole-genome sequencing reveals a major QTL. | de Ronne M et al. | β | 2022 | β |
| Mating allocations in Nordic Red Dairy Cattle using genomic information. | Bengtsson C et al. | β | 2022 | β |
| Meta-analysis of genome-wide association studies uncovers shared candidate genes across breeds for pig fatness trait. | Zeng H et al. | β | 2022 | β |
| Methylation risk scores are associated with a collection of phenotypes within electronic health record systems. | Thompson M et al. | β | 2022 | β |
| Mitonuclear incompatibility as a hidden driver behind the genome ancestry of African admixed cattle. | Kwon T et al. | β | 2022 | β |
| Mountain- and brown hare genetic polymorphisms to survey local adaptations and conservation status of the heath hare (Lepus timidus sylvaticus, Nilsson 1831). | Michell CT et al. | β | 2022 | β |
| Multi-environment genomic prediction for soluble solids content in peach (<i>Prunus persica</i>). | Hardner CM et al. | β | 2022 | β |
| Multi-Locus Genome-Wide Association Studies to Characterize Fusarium Head Blight (FHB) Resistance in Hard Winter Wheat. | Zhang J et al. | β | 2022 | β |
| Mutation spectrum of congenital heart disease in a consanguineous Turkish population. | Dong W et al. | β | 2022 | β |
| Natural and human-driven selection of a single non-coding body size variant in ancient and modern canids. | Plassais J et al. | β | 2022 | β |
| On the way to plant data commons - a genotyping use case. | Feser M et al. | β | 2022 | β |
| Patterns of piRNA Regulation in Drosophila Revealed through Transposable Element Clade Inference. | Said I et al. | β | 2022 | β |
| Performance of using opposing homozygotes for paternity testing in Japanese Black cattle. | Komiya R et al. | β | 2022 | β |
| Phasing analysis of lung cancer genomes using a long read sequencer. | Sakamoto Y et al. | β | 2022 | β |
| Phenotypic variation and genome-wide association studies of main culm panicle node number, maximum node production rate, and degree-days to heading in rice. | Sanchez DL et al. | β | 2022 | β |
| Phylogeny and disparate selection signatures suggest two genetically independent domestication events in pea (Pisum L.). | Hellwig T et al. | β | 2022 | β |
| Population Genomics Analysis with RAD, Reprised: Stacks 2. | Rivera-ColΓ³n AG et al. | β | 2022 | β |
| Population-specific, recent positive selection signatures in cultivated Cucumis sativus L. (cucumber). | Lin X et al. | β | 2022 | β |
| Precise, Genotype-First Breast Cancer Prevention: Experience With Transferring Monogenic Findings From a Population Biobank to the Clinical Setting. | JΓΌrgens H et al. | β | 2022 | β |
| Prioritized candidate causal haplotype blocks in plant genome-wide association studies. | Wu X et al. | β | 2022 | β |
| Progress and opportunities through use of genomics in animal production. | Jones HE et al. | β | 2022 | β |
| Quantitative trait loci and gene-specific markers associated with resistance to soybean cyst nematode HG type 2.5.7. | Lu X et al. | β | 2022 | β |
| Recognition and inhibition of SARS-CoV-2 by humoral innate immunity pattern recognition molecules. | Stravalaci M et al. | β | 2022 | β |
| Recombination and mutation shape variations in the major histocompatibility complex. | Sun Y et al. | β | 2022 | β |
| Regain flood adaptation in rice through a 14-3-3 protein OsGF14h. | Sun J et al. | β | 2022 | β |
| Researching on the fine structure and admixture of the worldwide chicken population reveal connections between populations and important events in breeding history. | Guo Y et al. | β | 2022 | β |
| Resequencing 250 Soybean Accessions: New Insights into Genes Associated with Agronomic Traits and Genetic Networks. | Yang C et al. | β | 2022 | β |
| Revealing the recent demographic history of Europe via haplotype sharing in the UK Biobank. | Gilbert E et al. | β | 2022 | β |
| Runs of Homozygosity Analysis Reveals Genomic Diversity and Population Structure of an Indigenous Cattle Breed in Southwest China. | Wang W et al. | β | 2022 | β |
| Selection against admixture and gene regulatory divergence in a long-term primate field study. | Vilgalys TP et al. | β | 2022 | β |
| Selection signature analysis and genome-wide divergence of South African Merino breeds from their founders. | Dzomba EF et al. | β | 2022 | β |
| Selective sweeps on different pigmentation genes mediate convergent evolution of island melanism in two incipient bird species. | Campagna L et al. | β | 2022 | β |
| Signatures of selection underpinning rapid coral adaptation to the world's warmest reefs. | Smith EG et al. | β | 2022 | β |
| Simultaneous inference of parental admixture proportions and admixture times from unphased local ancestry calls. | Avadhanam S et al. | β | 2022 | β |
| Single-nucleus chromatin accessibility profiling highlights regulatory mechanisms of coronary artery disease risk. | Turner AW et al. | β | 2022 | β |
| SNP-Based Genome-Wide Association Mapping of Pollen Viability Under Heat Stress in Tropical <i>Zea mays</i> L. Inbred Lines. | Ahmed Z et al. | β | 2022 | β |
| Species Persistence with Hybridization in Toad-Headed Lizards Driven by Divergent Selection and Low Recombination. | Gao W et al. | β | 2022 | β |
| Structural variation analysis of 6,500 whole genome sequences in amyotrophic lateral sclerosis. | Al Khleifat A et al. | β | 2022 | β |
| Supergene origin and maintenance in Atlantic cod. | Matschiner M et al. | β | 2022 | β |
| SVUPP: Pre-phasing long reads improves structural variant genotyping. | Li Z et al. | β | 2022 | β |
| Target-oriented prioritization: targeted selection strategy by integrating organismal and molecular traits through predictive analytics in breeding. | Yang W et al. | β | 2022 | β |
| Temperature-associated selection linked to putative chromosomal inversions in king scallop (<i>Pecten maximus</i>). | Hollenbeck CM et al. | β | 2022 | β |
| The construction of a haplotype reference panel using extremely low coverage whole genome sequences and its application in genome-wide association studies and genomic prediction in Duroc pigs. | Zhang Z et al. | β | 2022 | β |
| The loss of biodiversity in Madagascar is contemporaneous with major demographic events. | Alva O et al. | β | 2022 | β |
| The mutational dynamics of short tandem repeats in large, multigenerational families. | Steely CJ et al. | β | 2022 | β |
| The role of genomic signatures of directional selection and demographic history in the population structure of a marine teleost with high gene flow. | Weist P et al. | β | 2022 | β |
| The Tibetan-Yi region is both a corridor and a barrier for human gene flow. | Zhang Z et al. | β | 2022 | β |
| Towards unravelling the Rosette agent enigma: Spread and emergence of the co-invasive host-pathogen complex, Pseudorasbora parva-Sphaerothecum destruens. | Marine C et al. | β | 2022 | β |
| Translational Epidemiology: An Integrative Approach to Determine the Interplay Between Genetic Ancestry and Neighborhood Socioeconomic Status on Triple Negative Breast Cancer. | Goel N et al. | β | 2022 | β |
| Transmission distortion and genetic incompatibilities between alleles in a multigenerational mouse advanced intercross line. | Arends D et al. | β | 2022 | β |
| Using genomic prediction to detect microevolutionary change of a quantitative trait. | Hunter DC et al. | β | 2022 | β |
| Utility of Ugandan genomic selection cassava breeding populations for prediction of cassava viral disease resistance and yield in West African clones. | Ozimati AA et al. | β | 2022 | β |
| Utilizing genomics and historical data to optimize gene pools for new breeding programs: A case study in winter wheat. | BallΓ©n-Taborda C et al. | β | 2022 | β |
| Variants in proinflammatory genes IL1RL1, IL1B and IRF4 are associated with overweight in a pediatric Brazilian population. | Melo APC et al. | β | 2022 | β |
| Whole-genome analysis of hard winter wheat germplasm identifies genomic regions associated with spike and kernel traits. | Gill HS et al. | β | 2022 | β |
| Whole-genome analysis reveals the hybrid formation of Chinese indigenous DHB pig following human migration. | Wang Y et al. | β | 2022 | β |
| Whole-genome resequencing of Chinese pangolins reveals a population structure and provides insights into their conservation. | Wang Q et al. | β | 2022 | β |
| Whole genome resequencing reveals the genetic contribution of Kazakh and Swiss Brown cattle to a population of Xinjiang Brown cattle. | Chen Q et al. | β | 2022 | β |
| Accelerating wheat breeding for end-use quality through association mapping and multivariate genomic prediction. | Zhang-Biehn S et al. | β | 2021 | β |
| Accounting for epistasis improves genomic prediction of phenotypes with univariate and bivariate models across environments. | Vojgani E et al. | β | 2021 | β |
| Accuracy of genotype imputation based on reference population size and marker density in Hanwoo cattle. | Lee D et al. | β | 2021 | β |
| Accuracy of Imputation of Microsatellite Markers from a 50K SNP Chip in Spanish Assaf Sheep. | Marina H et al. | β | 2021 | β |
| Accurate Imputation of Untyped Variants from Deep Sequencing Data. | Torkamaneh D et al. | β | 2021 | β |
| A Chinese host genetic study discovered IFNs and causality of laboratory traits on COVID-19 severity. | Zhu H et al. | β | 2021 | β |
| A Continuous Statistical Phasing Framework for the Analysis of Forensic Mitochondrial DNA Mixtures. | Smart U et al. | β | 2021 | β |
| Adaptive Introgression Facilitates Adaptation to High Latitudes in European Aspen (Populus tremula L.). | RendΓ³n-Anaya M et al. | β | 2021 | β |
| A further survey of the quantitative trait loci affecting swine body size and carcass traits in five related pig populations. | Li LY et al. | β | 2021 | β |
| A genome-wide analysis of cardiac lesions of pigs that die during transport: Is heart failure of in-transit-loss pigs associated with a heritable cardiomyopathy? | Zurbrigg K et al. | β | 2021 | β |
| A Genome-Wide Association Study of a Korean Population Identifies Genetic Susceptibility to Hypertension Based on Sex-Specific Differences. | Cho SB et al. | β | 2021 | β |
| A multi-enhancer <i>RET</i> regulatory code is disrupted in Hirschsprung disease. | Chatterjee S et al. | β | 2021 | β |
| A mutation in a C2H2-type zinc finger transcription factor contributed to the transition toward self-pollination in cultivated tomato. | Shang L et al. | β | 2021 | β |
| Analysis of the primary sources of quantitative adult plant resistance to stripe rust in U.S. soft red winter wheat germplasm. | Ward BP et al. | β | 2021 | β |
| Analytical protocol to identify local ancestry-associated molecular features in cancer. | Carrot-Zhang J et al. | β | 2021 | β |
| Ancestry inference using reference labeled clusters of haplotypes. | Wang Y et al. | β | 2021 | β |
| Ancient genomes from a rural site in Imperial Rome (1<sup>st</sup>-3<sup>rd</sup> cent. CE): a genetic junction in the Roman Empire. | De Angelis F et al. | β | 2021 | β |
| An evaluation of inbreeding measures using a whole-genome sequenced cattle pedigree. | Alemu SW et al. | β | 2021 | β |
| An introgression breakthrough left by an anthropogenic contact between two ascidians. | Le Moan A et al. | β | 2021 | β |
| A quantitative genomics map of rice provides genetic insights and guides breeding. | Wei X et al. | β | 2021 | β |
| A selection signatures study among Middle Eastern and European sheep breeds. | Eydivandi S et al. | β | 2021 | β |
| Assessing the Genetic Background and Selection Signatures of Huaxi Cattle Using High-Density SNP Array. | Ma J et al. | β | 2021 | β |
| Assessment of Imputation Quality: Comparison of Phasing and Imputation Algorithms in Real Data. | Stahl K et al. | β | 2021 | β |
| Association genetics of the parameters related to nitrogen use efficiency in Brassica juncea L. | Gupta N et al. | β | 2021 | β |
| Association mapping and genomic selection for sorghum adaptation to tropical soils of Brazil in a sorghum multiparental random mating population. | Bernardino KC et al. | β | 2021 | β |
| A Survey of Compound Heterozygous Variants in Pediatric Cancers and Structural Birth Defects. | Miller DB et al. | β | 2021 | β |
| A transposon-mediated reciprocal translocation promotes environmental adaptation but compromises domesticability of wild soybeans. | Wang W et al. | β | 2021 | β |
| Autosomal recessive loci contribute significantly to quantitative variation of male fertility in a dairy cattle population. | Hiltpold M et al. | β | 2021 | β |
| Breed of origin of alleles and genomic predictions for crossbred dairy cows. | EirΓksson JH et al. | β | 2021 | β |
| CAMPAREE: a robust and configurable RNA expression simulator. | Lahens NF et al. | β | 2021 | β |
| Characterization of a haplotype-reference panel for genotyping by low-pass sequencing in Swiss Large White pigs. | NoskovΓ‘ A et al. | β | 2021 | β |
| Chromosome-Scale Genome Assembly for Chinese Sour Jujube and Insights Into Its Genome Evolution and Domestication Signature. | Shen LY et al. | β | 2021 | β |
| Climate-driven flyway changes and memory-based long-distance migration. | Gu Z et al. | β | 2021 | β |
| Colonization and genetic diversification processes of Leishmania infantum in the Americas. | Schwabl P et al. | β | 2021 | β |
| Comprehensive analytical and empirical evaluation of genomic prediction across diverse accessions in maize. | Dzievit MJ et al. | β | 2021 | β |
| Computational methods for chromosome-scale haplotype reconstruction. | Garg S | β | 2021 | β |
| Covariate adjusted inference of parent-of-origin effects using case-control mother-child paired multilocus genotype data. | Zhang K et al. | β | 2021 | β |
| Detecting selected haplotype blocks in evolve and resequence experiments. | Otte KA et al. | β | 2021 | β |
| Detecting the differential genomic variants using cross-population phenotype-associated variant (XP-PAV) of the Landrace and Yorkshire pigs in Korea. | Lee YS et al. | β | 2021 | β |
| Detection of selection signatures in the genome of a farmed population of anadromous rainbow trout (Oncorhynchus mykiss). | CΓ‘diz MI et al. | β | 2021 | β |
| Determination of complete chromosomal haplotypes by bulk DNA sequencing. | Tourdot RW et al. | β | 2021 | β |
| Developmental genetics of color pattern establishment in cats. | Kaelin CB et al. | β | 2021 | β |
| Different Sources of Allelic Variation Drove Repeated Color Pattern Divergence in Cichlid Fishes. | Urban S et al. | β | 2021 | β |
| Dissecting dynamics and differences of selective pressures in the evolution of human pigmentation. | Huang X et al. | β | 2021 | β |
| Diversification, Introgression, and Rampant Cytonuclear Discordance in Rocky Mountains Chipmunks (Sciuridae: Tamias). | Sarver BAJ et al. | β | 2021 | β |
| Dog colour patterns explained by modular promoters of ancient canid origin. | Bannasch DL et al. | β | 2021 | β |
| Drivers and dynamics of a massive adaptive radiation in cichlid fishes. | Ronco F et al. | β | 2021 | β |
| Dsuite - Fast D-statistics and related admixture evidence from VCF files. | Malinsky M et al. | β | 2021 | β |
| Dynamics of sex chromosome evolution in a rapid radiation of cichlid fishes. | El Taher A et al. | β | 2021 | β |
| Environmental gradients of selection for an alpine-obligate bird, the white-tailed ptarmigan (Lagopus leucura). | Zimmerman SJ et al. | β | 2021 | β |
| Exploring correlations in genetic and cultural variation across language families in northeast Asia. | Matsumae H et al. | β | 2021 | β |
| Extensive hybridization reveals multiple coloration genes underlying a complex plumage phenotype. | Aguillon SM et al. | β | 2021 | β |
| Extensive introgression and mosaic genomes of Mediterranean endemic lizards. | Yang W et al. | β | 2021 | β |
| Fast two-stage phasing of large-scale sequence data. | Browning BL et al. | β | 2021 | β |
| Fine-Mapping of the Major Histocompatibility Complex Region Linked to Leprosy in Northern China. | Zhang R et al. | β | 2021 | β |
| Full-length annotation with multistrategy RNA-seq uncovers transcriptional regulation of lncRNAs in cotton. | Zheng X et al. | β | 2021 | β |
| Genetically regulated expression underlies cellular sensitivity to chemotherapy in diverse populations. | Mulford AJ et al. | β | 2021 | β |
| Genetic Ancestry Contributes to Somatic Mutations in Lung Cancers from Admixed Latin American Populations. | Carrot-Zhang J et al. | β | 2021 | β |
| Genetic Architecture of Depression: Where Do We Stand Now? | Unal-Aydin P et al. | β | 2021 | β |
| Genetic basis and network underlying synergistic roots and shoots biomass accumulation revealed by genome-wide association studies in rice. | Zhao Y et al. | β | 2021 | β |
| Genetic determinants of seed protein plasticity in response to the environment in Medicago truncatula. | Cartelier K et al. | β | 2021 | β |
| Genetic dissection of seasonal vegetation index dynamics in maize through aerial based high-throughput phenotyping. | Wang J et al. | β | 2021 | β |
| Genetic diversity, population structure, and selection signature in Ethiopian sorghum [Sorghum bicolor L. (Moench)] germplasm. | Wondimu Z et al. | β | 2021 | β |
| Genetic landscape of Gullah African Americans. | Zimmerman KD et al. | β | 2021 | β |
| Genetic Origins and Sex-Biased Admixture of the Huis. | Ma X et al. | β | 2021 | β |
| Genetic Regulation of Biomarkers as Stress Proxies in Dairy Cows. | Milanesi M et al. | β | 2021 | β |
| Genetic variations for the eggshell crystal structure revealed by genome-wide association study in chickens. | Li Q et al. | β | 2021 | β |
| Genome-Wide Analyses for Osteosarcoma in Leonberger Dogs Reveal the <i>CDKN2A/B</i> Gene Locus as a Major Risk Locus. | Letko A et al. | β | 2021 | β |
| Genome-wide analyses reveal footprints of divergent selection and popping-related traits in CIMMYT's maize inbred lines. | Li J et al. | β | 2021 | β |
| Genome-wide association analysis uncovers the genetic architecture of tradeoff between flowering date and yield components in sesame. | Sabag I et al. | β | 2021 | β |
| Genome-wide association analysis unveils novel QTLs for seminal root system architecture traits in Ethiopian durum wheat. | Alemu A et al. | β | 2021 | β |
| Genome-wide association mapping identifies novel loci underlying fire blight resistance in apple. | Thapa R et al. | β | 2021 | β |
| Genome-wide association studies for sperm traits in Assaf sheep breed. | Serrano M et al. | β | 2021 | β |
| Genome-Wide Association Study Demonstrates the Role Played by the <i>CD226</i> Gene in Rasa Aragonesa Sheep Reproductive Seasonality. | Lakhssassi K et al. | β | 2021 | β |
| Genome-wide association study identifies five risk loci for pernicious anemia. | Laisk T et al. | β | 2021 | β |
| Genome-wide association study in almost 195,000 individuals identifies 50 previously unidentified genetic loci for eye color. | Simcoe M et al. | β | 2021 | β |
| Genome-wide association study of body fat distribution traits in Hispanics/Latinos from the HCHS/SOL. | Justice AE et al. | β | 2021 | β |
| Genome-wide association study of more than 40,000 bipolar disorder cases provides new insights into the underlying biology. | Mullins N et al. | β | 2021 | β |
| Genome-Wide Association Study of Seed Folate Content in Common Bean. | Martin CJ et al. | β | 2021 | β |
| Genome-wide epistatic interactions of litter size at birth in Chinese indigenous pigs. | Chen Z et al. | β | 2021 | β |
| Genome-wide insights on gastrointestinal nematode resistance in autochthonous Tunisian sheep. | Ahbara AM et al. | β | 2021 | β |
| Genome-wide scan for selective footprints and genes related to cold tolerance in Chantecler chickens. | Xu NY et al. | β | 2021 | β |
| Genome-wide survival study identifies a novel synaptic locus and polygenic score for cognitive progression in Parkinson's disease. | Liu G et al. | β | 2021 | β |
| Genomic Analysis Revealed a Convergent Evolution of LINE-1 in Coat Color: A Case Study in Water Buffaloes (Bubalus bubalis). | Liang D et al. | β | 2021 | β |
| Genomic and Phenotypic Diversity of Cultivated and Wild Tomatoes with Varying Levels of Heat Tolerance. | Ayenan MAT et al. | β | 2021 | β |
| Genomic inbreeding and selection signatures in the local dairy breed Icelandic Cattle. | Gautason E et al. | β | 2021 | β |
| Genomic mapping and identification of candidate genes encoding nulliplex-branch trait in sea-island cotton (<i>Gossypium barbadense</i> L.) by multi-omics analysis. | Wen T et al. | β | 2021 | β |
| Genomic prediction for latent variables related to milk fatty acid composition in Holstein, Simmental and Brown Swiss dairy cattle breeds. | Palombo V et al. | β | 2021 | β |
| Genomic prediction with non-additive effects in beef cattle: stability of variance component and genetic effect estimates against population size. | Onogi A et al. | β | 2021 | β |
| Genomic scans for selective sweeps through haplotype homozygosity and allelic fixation in 14 indigenous sheep breeds from Middle East and South Asia. | Eydivandi S et al. | β | 2021 | β |
| Genomic Signatures for Species-Specific Adaptation in Lake Victoria Cichlids Derived from Large-Scale Standing Genetic Variation. | Nakamura H et al. | β | 2021 | β |
| Genomic Targets of Positive Selection in Giant Mice from Gough Island. | Payseur BA et al. | β | 2021 | β |
| Glycine max NNL1 restricts symbiotic compatibility with widely distributed bradyrhizobia via root hair infection. | Zhang B et al. | β | 2021 | β |
| Grouping of genomic markers in populations with family structure. | Wittenburg D et al. | β | 2021 | β |
| GWAS Analysis of 17,019 Korean Women Identifies the Variants Associated with Facial Pigmented Spots. | Shin JG et al. | β | 2021 | β |
| GWAS findings improved genomic prediction accuracy of lipid profile traits: Tehran Cardiometabolic Genetic Study. | Akbarzadeh M et al. | β | 2021 | β |
| Haplotype-resolved germline and somatic alterations in renal medullary carcinomas. | Tan KT et al. | β | 2021 | β |
| HaplotypeTools: a toolkit for accurately identifying recombination and recombinant genotypes. | Farrer RA | β | 2021 | β |
| Heritability and Genomic Architecture of Episodic Exercise-Induced Collapse in Border Collies. | Norton EM et al. | β | 2021 | β |
| Heterogeneity of a dwarf phenotype in Dutch traditional chicken breeds revealed by genomic analyses. | Wu Z et al. | β | 2021 | β |
| HICANCER: accurate and complete cancer genome phasing with Hi-C reads. | Pan W et al. | β | 2021 | β |
| Hybrid speciation via inheritance of alternate alleles of parental isolating genes. | Wang Z et al. | β | 2021 | β |
| Identification of Candidate Variants Associated With Bone Weight Using Whole Genome Sequence in Beef Cattle. | Niu Q et al. | β | 2021 | β |
| Identification of common predisposing loci to hematopoietic cancers in four dog breeds. | HΓ©dan B et al. | β | 2021 | β |
| Identification of deleterious recessive haplotypes and candidate deleterious recessive mutations in Japanese Black cattle. | Sasaki S et al. | β | 2021 | β |
| Identification of genes related to intramuscular fat independent of backfat thickness in Duroc pigs using single-step genome-wide association. | Zhang Z et al. | β | 2021 | β |
| Impact of Marker Pruning Strategies Based on Different Measurements of Marker Distance on Genomic Prediction in Dairy Cattle. | Ren D et al. | β | 2021 | β |
| Impact of pre- and post-variant filtration strategies on imputation. | Charon C et al. | β | 2021 | β |
| Improving the resolution of canine genome-wide association studies using genotype imputation: A study of two breeds. | Jenkins CA et al. | β | 2021 | β |
| Increasing the resolution and precision of psychiatric genome-wide association studies by re-imputing summary statistics using a large, diverse reference panel. | Chatzinakos C et al. | β | 2021 | β |
| Inference of Ancestries and Heterozygosity Proportion and Genotype Imputation in West African Cattle Populations. | Gebrehiwot NZ et al. | β | 2021 | β |
| Insights into adaption and growth evolution: a comparative genomics study on two distinct cattle breeds from Northern and Southern China. | Mei C et al. | β | 2021 | β |
| Insights into invasive species from whole-genome resequencing. | North HL et al. | β | 2021 | β |
| Integration of multi-omics approaches for functional characterization of muscle related selective sweep genes in Nanchukmacdon. | Arora D et al. | β | 2021 | β |
| Integration of selection signatures and multi-trait GWAS reveals polygenic genetic architecture of carcass traits in beef cattle. | Niu Q et al. | β | 2021 | β |
| Integrative reconstruction of cancer genome karyotypes using InfoGenomeR. | Lee Y et al. | β | 2021 | β |
| Investigative genetic genealogy: Current methods, knowledge and practice. | Kling D et al. | β | 2021 | β |
| Large genetic diversity and strong positive selection in F-box and GPCR genes among the wild isolates of Caenorhabditis elegans. | Ma F et al. | β | 2021 | β |
| Large-Scale Whole Genome Sequencing Study Reveals Genetic Architecture and Key Variants for Breast Muscle Weight in Native Chickens. | Tan X et al. | β | 2021 | β |
| Leukocyte and cytokine variables in asymptomatic Pugs at genetic risk of necrotizing meningoencephalitis. | Windsor R et al. | β | 2021 | β |
| Linkage Disequilibrium and Effective Population Size of Buffalo Populations of Iran, Turkey, Pakistan, and Egypt Using a Medium Density SNP Array. | Rahimmadar S et al. | β | 2021 | β |
| Low-coverage sequencing cost-effectively detects known and novel variation in underrepresented populations. | Martin AR et al. | β | 2021 | β |
| MHC class IIa haplotypes derived by high-throughput SNP screening in an isolated sheep population. | Dicks KL et al. | β | 2021 | β |
| Mining massive genomic data of two Swiss Braunvieh cattle populations reveals six novel candidate variants that impair reproductive success. | HΓ€fliger IM et al. | β | 2021 | β |
| Morphological and genomic shifts in mole-rat 'queens' increase fecundity but reduce skeletal integrity. | Johnston RA et al. | β | 2021 | β |
| Multi-Trait Multi-Environment Genomic Prediction of Agronomic Traits in Advanced Breeding Lines of Winter Wheat. | Gill HS et al. | β | 2021 | β |
| Mutant alleles differentially shape fitness and other complex traits in cattle. | Xiang R et al. | β | 2021 | β |
| Natural variation in the regulation of neurodevelopmental genes modifies flight performance in Drosophila. | Spierer AN et al. | β | 2021 | β |
| Newly discovered cichlid fish biodiversity threatened by hybridization with non-native species. | Blackwell T et al. | β | 2021 | β |
| Novel Design of Imputation-Enabled SNP Arrays for Breeding and Research Applications Supporting Multi-Species Hybridization. | Keeble-GagnΓ¨re G et al. | β | 2021 | β |
| nPhase: an accurate and contiguous phasing method for polyploids. | Abou Saada O et al. | β | 2021 | β |
| Nuclear genome-wide associations with mitochondrial heteroplasmy. | Nandakumar P et al. | β | 2021 | β |
| Oral vitamin D supplementation induces transcriptomic changes in rectal mucosa that are linked to anti-tumour effects. | Vaughan-Shaw PG et al. | β | 2021 | β |
| OryzaGenome2.1: Database of Diverse Genotypes in Wild Oryza Species. | Kajiya-Kanegae H et al. | β | 2021 | β |
| Pairwise linkage disequilibrium estimation for polyploids. | Gerard D | β | 2021 | β |
| Parallel genomic responses to historical climate change and high elevation in East Asian songbirds. | Cheng Y et al. | β | 2021 | β |
| PATRIOT: A Pipeline for Tracing Identity-by-Descent for Chromosome Segments to Improve Genomic Prediction in Self-Pollinating Crop Species. | Shook JM et al. | β | 2021 | β |
| Pedigree reconstruction and distant pairwise relatedness estimation from genome sequence data: A demonstration in a population of rhesus macaques (Macaca mulatta). | Petty LE et al. | β | 2021 | β |
| Phenotypic Plasticity Contributes to Maize Adaptation and Heterosis. | Liu N et al. | β | 2021 | β |
| Placenta mediates the effect of maternal hypertension polygenic score on offspring birth weight: a study of birth cohort with fetal growth velocity data. | Sato N et al. | β | 2021 | β |
| Polygenic risk scores for low-density lipoprotein cholesterol and familial hypercholesterolemia. | Nomura A et al. | β | 2021 | β |
| Population collapse in Congo rainforest from 400 CE urges reassessment of the Bantu Expansion. | Seidensticker D et al. | β | 2021 | β |
| Population genomics of the critically endangered kΔkΔpΕ. | Dussex N et al. | β | 2021 | β |
| Population structure of indigenous inhabitants of Arabia. | Mineta K et al. | β | 2021 | β |
| Post-genotyping optimization of dataset formation could affect genetic diversity parameters: an example of analyses with alpine goat breeds. | Pogorevc N et al. | β | 2021 | β |
| Pre-introduction introgression contributes to parallel differentiation and contrasting hybridization outcomes between invasive and native marine mussels. | Popovic I et al. | β | 2021 | β |
| Privacy-preserving genotype imputation in a trusted execution environment. | Dokmai N et al. | β | 2021 | β |
| Rapid speciation via the evolution of pre-mating isolation in the IberΓ‘ Seedeater. | Turbek SP et al. | β | 2021 | β |
| Rare variant <i>MX1</i> alleles increase human susceptibility to zoonotic H7N9 influenza virus. | Chen Y et al. | β | 2021 | β |
| Recent ultra-rare inherited variants implicate new autism candidate risk genes. | Wilfert AB et al. | β | 2021 | β |
| Reconstructing the Human Genetic History of Mainland Southeast Asia: Insights from Genome-Wide Data from Thailand and Laos. | Kutanan W et al. | β | 2021 | β |
| Replication of HLA class II locus association with susceptibility to podoconiosis in three Ethiopian ethnic groups. | Gebresilase T et al. | β | 2021 | β |
| R-locus for roaned coat is associated with a tandem duplication in an intronic region of USH2A in dogs and also contributes to Dalmatian spotting. | Kawakami T et al. | β | 2021 | β |
| Runs of homozygosity in killer whale genomes provide a global record of demographic histories. | Foote AD et al. | β | 2021 | β |
| Scalable bias-corrected linkage disequilibrium estimation under genotype uncertainty. | Gerard D | β | 2021 | β |
| Selfish chromosomal drive shapes recent centromeric histone evolution in monkeyflowers. | Finseth FR et al. | β | 2021 | β |
| Sequence-based genome-wide association study of individual milk mid-infrared wavenumbers in mixed-breed dairy cattle. | Tiplady KM et al. | β | 2021 | β |
| Sequencing of 53,831 diverse genomes from the NHLBI TOPMed Program. | Taliun D et al. | β | 2021 | β |
| Single-Cell RNA Sequencing in Parkinson's Disease. | Ma SX et al. | β | 2021 | β |
| Spatial kernel models capturing field heterogeneity for accurate estimation of genetic potential. | Ishimori M et al. | β | 2021 | β |
| Standing variation rather than recent adaptive introgression probably underlies differentiation of the texanus subspecies of Helianthus annuus. | Owens GL et al. | β | 2021 | β |
| State-of-the-art genome inference in the human MHC. | Dilthey AT | β | 2021 | β |
| Subcutaneous and intramuscular fat transcriptomes show large differences in network organization and associations with adipose traits in pigs. | Zhang Y et al. | β | 2021 | β |
| Systematic analysis of binding of transcription factors to noncoding variants. | Yan J et al. | β | 2021 | β |
| The climatic and genetic heritage of Italian goat breeds with genomic SNP data. | Cortellari M et al. | β | 2021 | β |
| The Genes of Freedom: Genome-Wide Insights into Marronage, Admixture and Ethnogenesis in the Gulf of Guinea. | Almeida J et al. | β | 2021 | β |
| The genetic landscape of polycystic kidney disease in Ireland. | Benson KA et al. | β | 2021 | β |
| The genetic mechanism of heterosis utilization in maize improvement. | Xiao Y et al. | β | 2021 | β |
| The genetic structure of Norway. | Mattingsdal M et al. | β | 2021 | β |
| The genomes of ancient date palms germinated from 2,000 y old seeds. | Gros-Balthazard M et al. | β | 2021 | β |
| The genomic history of the Middle East. | Almarri MA et al. | β | 2021 | β |
| The genomic landscape of Mexican Indigenous populations brings insights into the peopling of the Americas. | GarcΓa-Ortiz H et al. | β | 2021 | β |
| The history and evolution of the Denisovan-<i>EPAS1</i> haplotype in Tibetans. | Zhang X et al. | β | 2021 | β |
| The history and geographic distribution of a KCNQ1 atrial fibrillation risk allele. | Hateley S et al. | β | 2021 | β |
| The Influence of CYP2D6 and CYP2C19 Genetic Variation on Diabetes Mellitus Risk in People Taking Antidepressants and Antipsychotics. | Austin-Zimmerman I et al. | β | 2021 | β |
| The intronic branch point sequence is under strong evolutionary constraint in the bovine and human genome. | Kadri NK et al. | β | 2021 | β |
| The patterns of deleterious mutations during the domestication of soybean. | Kim MS et al. | β | 2021 | β |
| TheΒ Pop-Gen Pipeline Platform: A Software Platform for Population Genomic Analyses. | Webb A et al. | β | 2021 | β |
| The timing of human adaptation from Neanderthal introgression. | Yair S et al. | β | 2021 | β |
| Thrice out of Asia and the adaptive radiation of the western honey bee. | Dogantzis KA et al. | β | 2021 | β |
| Tracing founder haplotypes of Japanese apple varieties: application in genomic prediction and genome-wide association study. | Minamikawa MF et al. | β | 2021 | β |
| Transethnic analysis of the human leukocyte antigen region for ulcerative colitis reveals not only shared but also ethnicity-specific disease associations. | Degenhardt F et al. | β | 2021 | β |
| TWAS results are complementary to and less affected by linkage disequilibrium than GWAS. | Li D et al. | β | 2021 | β |
| Unhealthy Behaviours and Risk of Parkinson's Disease: A Mendelian Randomisation Study. | Heilbron K et al. | β | 2021 | β |
| Unraveling a genetic roadmap for improved taste in the domesticated apple. | Liao L et al. | β | 2021 | β |
| What happens at night? Physiological mechanisms related to maintaining grain yield under high night temperature in rice. | Xu J et al. | β | 2021 | β |
| Whole-Genome Diversification Analysis of the Hornbeam Species Reveals Speciation and Adaptation Among Closely Related Species. | Zheng Z et al. | β | 2021 | β |
| Whole-genome resequencing reveals diversity and selective signals in Longlin goat. | Chen Q et al. | β | 2021 | β |
| Whole-genome sequencing analysis of semi-supercentenarians. | Garagnani P et al. | β | 2021 | β |
| Whole-genome sequencing of Schistosoma mansoni reveals extensive diversity with limited selection despite mass drug administration. | Berger DJ et al. | β | 2021 | β |
| Whole-genome sequencing reveals asymmetric introgression between two sister species of cold-resistant leaf beetles. | Lukicheva S et al. | β | 2021 | β |
| Whole Genome Sequencing Reveals Multiple Linked Genetic Variants on Canine Chromosome 12 Associated with Risk for Symmetrical Lupoid Onychodystrophy (SLO) in the Bearded Collie. | Gershony LC et al. | β | 2021 | β |
| Whole-genome SNP markers reveal conservation status, signatures of selection, and introgression in Chinese Laiwu pigs. | Wang X et al. | β | 2021 | β |
| A complex phenotype in salmon controlled by a simple change in migratory timing. | Thompson NF et al. | β | 2020 | β |
| Adaptive Introgression across Semipermeable Species Boundaries between Local Helicoverpa zea and Invasive Helicoverpa armigera Moths. | Valencia-Montoya WA et al. | β | 2020 | β |
| A Genomic Study of Myxomatous Mitral Valve Disease in Cavalier King Charles Spaniels. | Bionda A et al. | β | 2020 | β |
| A <i>CNTNAP1</i> Missense Variant Is Associated with Canine Laryngeal Paralysis and Polyneuropathy. | Letko A et al. | β | 2020 | β |
| A Review of Integrative Imputation for Multi-Omics Datasets. | Song M et al. | β | 2020 | β |
| Assessment of Imputation from Low-Pass Sequencing to Predict Merit of Beef Steers. | Snelling WM et al. | β | 2020 | β |
| Assessment of the Potential for Genomic Selection To Improve Husk Traits in Maize. | Cui Z et al. | β | 2020 | β |
| Assessment of the potential role of natural selection in type 2 diabetes and related traits across human continental ancestry groups: comparison of phenotypic with genotypic divergence. | Hanson RL et al. | β | 2020 | β |
| A Survey of Rare Epigenetic Variation in 23,116 Human Genomes Identifies Disease-Relevant Epivariations and CGG Expansions. | Garg P et al. | β | 2020 | β |
| Candidate gene mapping identifies genomic variations in the fire blight susceptibility genes HIPM and DIPM across the Malus germplasm. | Tegtmeier R et al. | β | 2020 | β |
| Candidate Genetic Modifiers for RPGR Retinal Degeneration. | Appelbaum T et al. | β | 2020 | β |
| CompoundHetVIP: Compound Heterozygous Variant Identification Pipeline. | Miller DB et al. | β | 2020 | β |
| Differential admixture in Latin American populations and its impact on the study of colorectal cancer. | Colistro V et al. | β | 2020 | β |
| Dissecting the Genetic Architecture of Biofuel-Related Traits in a Sorghum Breeding Population. | Ishimori M et al. | β | 2020 | β |
| Draft Genomes of Amaranthus tuberculatus, Amaranthus hybridus, and Amaranthus palmeri. | Montgomery JS et al. | β | 2020 | β |
| Ecological adaptation in Atlantic herring is associated with large shifts in allele frequencies at hundreds of loci. | Han F et al. | β | 2020 | β |
| Exploring the genetic basis of fatty liver development in geese. | Yang Y et al. | β | 2020 | β |
| Extensive Ethnolinguistic Diversity in Vietnam Reflects Multiple Sources of Genetic Diversity. | Liu D et al. | β | 2020 | β |
| Gene reuse facilitates rapid radiation and independent adaptation to diverse habitats in the Asian honeybee. | Ji Y et al. | β | 2020 | β |
| Genetic Dissection of Growth Traits in a Unique Chicken Advanced Intercross Line. | Wang Y et al. | β | 2020 | β |
| Genetic signature of hybridization between Chinese spot-billed ducks and domesticated ducks. | Guo X et al. | β | 2020 | β |
| Genetic variant effects on gene expression in human pancreatic islets and their implications for T2D. | ViΓ±uela A et al. | β | 2020 | β |
| Genetic variation associated with PPO-inhibiting herbicide tolerance in sorghum. | Adhikari P et al. | β | 2020 | β |
| Genome Resequencing, Improvement of Variant Calling, and Population Genomic Analyses Provide Insights into the Seedlessness in the Genus <i>Vitis</i>. | Kim MS et al. | β | 2020 | β |
| Genome-wide association identifies several QTLs controlling cysteine and methionine content in soybean seed including some promising candidate genes. | Malle S et al. | β | 2020 | β |
| Genome-Wide Detection of Selection Signatures in Duroc Revealed Candidate Genes Relating to Growth and Meat Quality. | Yu J et al. | β | 2020 | β |
| Genomic Characterization of the Istrian Shorthaired Hound. | Djurkin KuΕ‘ec I et al. | β | 2020 | β |
| Hla-C genetic diversity and evolutionary insights in two samples from Brazil and Benin. | Souza AS et al. | β | 2020 | β |
| Identification of Genetic Susceptibility Factors Associated with Canine Gastric Dilatation-Volvulus. | Piras IS et al. | β | 2020 | β |
| Identification of loci controlling mineral element concentration in soybean seeds. | Malle S et al. | β | 2020 | β |
| Identity by descent analysis identifies founder events and links <i>SOD1</i> familial and sporadic ALS cases. | Henden L et al. | β | 2020 | β |
| Impact of Genetic Ancestry on Prognostic Biomarkers in Uveal Melanoma. | Rodriguez DA et al. | β | 2020 | β |
| Impacts of dominance effects on genomic prediction of sorghum hybrid performance. | Ishimori M et al. | β | 2020 | β |
| Improving the accuracy of genomic evaluation for linear body measurement traits using single-step genomic best linear unbiased prediction in Hanwoo beef cattle. | Naserkheil M et al. | β | 2020 | β |
| Inference of Chromosome-Length Haplotypes Using Genomic Data of Three or a Few More Single Gametes. | Li R et al. | β | 2020 | β |
| Inferring the ancestry of parents and grandparents from genetic data. | Pei J et al. | β | 2020 | β |
| Insights into Genetic Diversity, Runs of Homozygosity and Heterozygosity-Rich Regions in Maremmana Semi-Feral Cattle Using Pedigree and Genomic Data. | Biscarini F et al. | β | 2020 | β |
| Local ancestry inference provides insight into Tilapia breeding programmes. | Avallone A et al. | β | 2020 | β |
| Meta-analysis of GWAS in canola blackleg (Leptosphaeria maculans) disease traits demonstrates increased power from imputed whole-genome sequence. | Fikere M et al. | β | 2020 | β |
| Nasopharyngeal carcinoma MHC region deep sequencing identifies HLA and novel non-HLA TRIM31 and TRIM39 loci. | Ning L et al. | β | 2020 | β |
| Native American ancestry significantly contributes to neuromyelitis optica susceptibility in the admixed Mexican population. | Romero-Hidalgo S et al. | β | 2020 | β |
| Performances of Adaptive MultiBLUP, Bayesian regressions, and weighted-GBLUP approaches for genomic predictions in Belgian Blue beef cattle. | GualdrΓ³n Duarte JL et al. | β | 2020 | β |
| Periostin Circulating Levels and Genetic Variants in Patients with Non-Alcoholic Fatty Liver Disease. | Smirne C et al. | β | 2020 | β |
| Population genomics of the Viking world. | Margaryan A et al. | β | 2020 | β |
| Probabilistic Estimation of Identity by Descent Segment Endpoints and Detection of Recent Selection. | Browning SR et al. | β | 2020 | β |
| Resequencing of 145 Landmark Cultivars Reveals Asymmetric Sub-genome Selection and Strong Founder Genotype Effects on Wheat Breeding in China. | Hao C et al. | β | 2020 | β |
| Selection signatures of Fuzhong Buffalo based on whole-genome sequences. | Sun T et al. | β | 2020 | β |
| Selective sweep analysis reveals extensive parallel selection traits between large white and Duroc pigs. | Zhang S et al. | β | 2020 | β |
| Steelhead (<i>Oncorhynchus mykiss</i>) lineages and sexes show variable patterns of association of adult migration timing and age-at-maturity traits with two genomic regions. | Willis SC et al. | β | 2020 | β |
| Technologies for Pharmacogenomics: A Review. | van der Lee M et al. | β | 2020 | β |
| The apple REFPOP-a reference population for genomics-assisted breeding in apple. | Jung M et al. | β | 2020 | β |
| The association of clinical phenotypes to known AD/FTD genetic risk loci and their inter-relationship. | Li QS et al. | β | 2020 | β |
| The ecological and genomic basis of explosive adaptive radiation. | McGee MD et al. | β | 2020 | β |
| The <i>CHEK2</i> Variant C.349A>G Is Associated with Prostate Cancer Risk and Carriers Share a Common Ancestor. | BrandΓ£o A et al. | β | 2020 | β |
| The mosaic genome of indigenous African cattle as a unique genetic resource for African pastoralism. | Kim K et al. | β | 2020 | β |
| Tracing selection signatures in the pig genome gives evidence for selective pressures on a unique curly hair phenotype in Mangalitza. | Schachler K et al. | β | 2020 | β |
| Transfer learning enables prediction of CYP2D6 haplotype function. | McInnes G et al. | β | 2020 | β |
| Unravelling selection signatures in a single dog breed suggests recent selection for morphological and behavioral traits. | Friedrich J et al. | β | 2020 | β |
| Whole genome analysis of water buffalo and global cattle breeds highlights convergent signatures of domestication. | Dutta P et al. | β | 2020 | β |
| Whole genome sequencing of Plasmodium vivax isolates reveals frequent sequence and structural polymorphisms in erythrocyte binding genes. | Ford A et al. | β | 2020 | β |
| Whole genome variants across 57 pig breeds enable comprehensive identification of genetic signatures that underlie breed features. | Xu J et al. | β | 2020 | β |