Addiction molecular genetics: 639,401 SNP whole genome association identifies many "cell adhesion" genes.
- Authors
- Liu, Qing-Rong; Drgon, Tomas; Johnson, Catherine; Walther, Donna; Hess, Judith; Uhl, George R
- Year
- 2006
- Journal
- American journal of medical genetics. Part B, Neuropsychiatric genetics : the official publication of the International Society of Psychiatric Genetics
- PMID
- 17099884
- DOI
- 10.1002/ajmg.b.30436
Addictions are substantially heritable complex disorders. We now report whole genome association studies that identify 89 genes likely to contain variants that contribute to addiction vulnerability, using previously- and newly-validated microarray based pooling assays. Each gene contains clustered single nucleotide polymorphisms (SNPs) that display significant allele frequency differences between abusers and controls in each of the two samples studied with 639,401 SNP arrays and confirmatory SNPs from each of two other abuser/control samples. These genes are implicated in interesting functions, including "cell adhesion" processes that help to establish and maintain neuronal connections of special relevance to addiction's memory-like features.
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| Title | Authors | Journal | Year | Link |
|---|---|---|---|---|
| Adhesion G protein-coupled receptors. | Langenhan T et al. | β | 2026 | β |
| The relationship between schizophrenia polygenic scores, blood-based proteins and psychosis diagnosis in the UK Biobank. | Kendall KM et al. | β | 2026 | β |
| Cell-Specific Functions of the BAI/ADGRB Subfamily of Adhesion G-Protein Coupled Receptors. | Alsharif HA et al. | β | 2025 | β |
| Pentilludin reduces rat amphetamine and remifentail self-administration with good pharmacologic and toxicologic profiles | Uhl G et al. | β | 2025 | β |
| Phasic dopamine release in two different rat models of attention-deficit/hyperactivity disorder: Spontaneously hypertensive rats (SHR) versus Lphn3 knockout rats. | Sable HJK et al. | β | 2025 | β |
| Mapping seasonal migration in a songbird hybrid zone -- heritability, genetic correlations, and genomic patterns linked to speciation. | Justen HC et al. | β | 2024 | β |
| Brain-Specific Angiogenesis Inhibitor 3 Is Expressed in the Cochlea and Is Necessary for Hearing Function in Mice. | Saegusa C et al. | β | 2023 | β |
| Generation and initial characterization of mice lacking full-length BAI3 (ADGRB3) expression. | Shiu FH et al. | β | 2023 | β |
| Selecting the appropriate hurdles and endpoints for pentilludin, a novel antiaddiction pharmacotherapeutic targeting the receptor type protein tyrosine phosphatase D. | Uhl GR | β | 2023 | β |
| Structure, function, and pathology of Neurexin-3. | Zhang R et al. | β | 2023 | β |
| FOXN3 and GDNF Polymorphisms as Common Genetic Factors of Substance Use and Addictive Behaviors. | Vereczkei A et al. | β | 2022 | β |
| Latrophilin-3 heterozygous versus homozygous mutations in Sprague Dawley rats: Effects on egocentric and allocentric memory and locomotor activity. | Regan SL et al. | β | 2022 | β |
| Structure-activity studies of PTPRD phosphatase inhibitors identify a 7-cyclopentymethoxy illudalic acid analog candidate for development. | Henderson IM et al. | β | 2022 | β |
| Synapse Formation and Function Across Species: Ancient Roles for CCP, CUB, and TSP-1 Structural Domains. | GonzΓ‘lez-Calvo I et al. | β | 2022 | β |
| An assessment of executive function in two different rat models of attention-deficit hyperactivity disorder: Spontaneously hypertensive versus Lphn3 knockout rats. | Sable HJK et al. | β | 2021 | β |
| Common genetic substrates of alcohol and substance use disorder severity revealed by pleiotropy detection against GWAS catalog in two populations. | Peng Q et al. | β | 2021 | β |
| Genetic underpinnings of affective temperaments: a pilot GWAS investigation identifies a new genome-wide significant SNP for anxious temperament in ADGRB3 gene. | Gonda X et al. | β | 2021 | β |
| Neurexin-3 defines synapse- and sex-dependent diversity of GABAergic inhibition in ventral subiculum. | Boxer EE et al. | β | 2021 | β |
| Perinatal SSRI Exposure Disrupts G Protein-coupled Receptor BAI3 in Developing Dentate Gyrus and Adult Emotional Behavior: Relevance to Psychiatric Disorders. | Unroe KA et al. | β | 2021 | β |
| Traumatic events during childhood and its risks to substance use in adulthood: an observational and genome-wide by environment interaction study in UK Biobank. | Cheng S et al. | β | 2021 | β |
| Genome-Wide Association Study of Smoking Behavior Traits in a Chinese Han Population. | Li M et al. | β | 2020 | β |
| Large epigenome-wide association study of childhood ADHD identifies peripheral DNA methylation associated with disease and polygenic risk burden. | Mooney MA et al. | β | 2020 | β |
| The Streetlight Effect: Reappraising the Study of Addiction in Light of the Findings of Genome-wide Association Studies. | Hall FS et al. | β | 2020 | β |
| Biallelic intragenic duplication in ADGRB3 (BAI3) gene associated with intellectual disability, cerebellar atrophy, and behavioral disorder. | Scuderi C et al. | β | 2019 | β |
| Coevolution of Residues Provides Evidence of a Functional Heterodimer of 5-HT<sub>2A</sub>R and 5-HT<sub>2C</sub>R Involving Both Intracellular and Extracellular Domains. | Fongang B et al. | β | 2019 | β |
| Emerging roles of Fgf14 in behavioral control. | Hoxha E et al. | β | 2019 | β |
| Genetics of cocaine and methamphetamine consumption and preference in Drosophila melanogaster. | Highfill CA et al. | β | 2019 | β |
| Neurexin 3 transmembrane and soluble isoform expression and splicing haplotype are associated with neuron inflammasome and Alzheimer's disease. | Hishimoto A et al. | β | 2019 | β |
| PTPRD: neurobiology, genetics, and initial pharmacology of a pleiotropic contributor to brain phenotypes. | Uhl GR et al. | β | 2019 | β |
| Cocaine reward is reduced by decreased expression of receptor-type protein tyrosine phosphatase D (PTPRD) and by a novel PTPRD antagonist. | Uhl GR et al. | β | 2018 | β |
| Neuroepigenetics and addiction. | Walker DM et al. | β | 2018 | β |
| The Role of Cell Adhesion Molecule Genes Regulating Neuroplasticity in Addiction. | Muskiewicz DE et al. | β | 2018 | β |
| Alpha-1 antitrypsin inhibits RANKL-induced osteoclast formation and functions. | Akbar MA et al. | β | 2017 | β |
| Cadherins mediate cocaine-induced synaptic plasticity and behavioral conditioning. | Mills F et al. | β | 2017 | β |
| Cdh13 and AdipoQ gene knockout alter instrumental and Pavlovian drug conditioning. | King CP et al. | β | 2017 | β |
| CHN2 Promoter Methylation Change May Be Associated With Methamphetamine Dependence. | Hao L et al. | β | 2017 | β |
| Methylphenidate and Atomoxetine-Responsive Prefrontal Cortical Genetic Overlaps in "Impulsive" SHR/NCrl and Wistar Rats. | Dela PeΓ±a I et al. | β | 2017 | β |
| Pleiotropy of genetic variants on obesity and smoking phenotypes: Results from the Oncoarray Project of The International Lung Cancer Consortium. | Wang T et al. | β | 2017 | β |
| Transcriptomic Analysis of Lung Tissue from Cigarette Smoke-Induced Emphysema Murine Models and Human Chronic Obstructive Pulmonary Disease Show Shared and Distinct Pathways. | Yun JH et al. | β | 2017 | β |
| Adhesion GPCR-Related Protein Networks. | Knapp B et al. | β | 2016 | β |
| Adhesion GPCRs as Novel Actors in Neural and Glial Cell Functions: From Synaptogenesis to Myelination. | Sigoillot SM et al. | β | 2016 | β |
| Behavioral and transcriptomic profiling of mice null for Lphn3, a gene implicated in ADHD and addiction. | Orsini CA et al. | β | 2016 | β |
| Cadherin 13: human <i>cis</i>-regulation and selectively-altered addiction phenotypes and cerebral cortical dopamine in knockout mice. | Drgonova J et al. | β | 2016 | β |
| Emerging Roles of BAI Adhesion-GPCRs in Synapse Development and Plasticity. | Duman JG et al. | β | 2016 | β |
| Expression of C1ql3 in Discrete Neuronal Populations Controls Efferent Synapse Numbers andΒ Diverse Behaviors. | Martinelli DC et al. | β | 2016 | β |
| Genetic deletion of fibroblast growth factor 14 recapitulates phenotypic alterations underlying cognitive impairment associated with schizophrenia. | Alshammari TK et al. | β | 2016 | β |
| Hemizygous Deletion on Chromosome 3p26.1 Is Associated with Heavy Smoking among African American Subjects in the COPDGene Study. | Begum F et al. | β | 2016 | β |
| High Prevalence of Smoking in the Roma Population Seems to Have No Genetic Background. | Fiatal S et al. | β | 2016 | β |
| CDH13 and HCRTR2 May Be Associated with Hypersomnia Symptom of Bipolar Depression: A Genome-Wide Functional Enrichment Pathway Analysis. | Cho CH et al. | β | 2015 | β |
| Human cell adhesion molecules: annotated functional subtypes and overrepresentation of addiction-associated genes. | Zhong X et al. | β | 2015 | β |
| International Union of Basic and Clinical Pharmacology. XCIV. Adhesion G protein-coupled receptors. | Hamann J et al. | β | 2015 | β |
| Polymorphisms in early neurodevelopmental genes affect natural variation in alcohol sensitivity in adult drosophila. | Morozova TV et al. | β | 2015 | β |
| Structures of C1q-like proteins reveal unique features among the C1q/TNF superfamily. | Ressl S et al. | β | 2015 | β |
| A Pilot Study for Discovering Candidate Genes of Chromosome 18q21 in Methamphetamine Abusers: Case-control Association Study. | Lee BD et al. | β | 2014 | β |
| Curious cases: Altered dose-response relationships in addiction genetics. | Uhl GR et al. | β | 2014 | β |
| Genetics and genomics of alcohol sensitivity. | Morozova TV et al. | β | 2014 | β |
| Identifying Genetic Variants for Addiction via Propensity Score Adjusted Generalized Kendall's Tau. | Jiang Y et al. | β | 2014 | β |
| New functions and signaling mechanisms for the class of adhesion G protein-coupled receptors. | Liebscher I et al. | β | 2014 | β |
| Polygenic risk scores for smoking: predictors for alcohol and cannabis use? | Vink JM et al. | β | 2014 | β |
| Advances in genetic studies of substance abuse in China. | Sun Y et al. | β | 2013 | β |
| Association of a novel polymorphism of the Ξ²2-chimaerin gene (CHN2) with smoking. | Barrio-Real L et al. | β | 2013 | β |
| Association study of 37 genes related to serotonin and dopamine neurotransmission and neurotrophic factors in cocaine dependence. | FernΓ ndez-Castillo N et al. | β | 2013 | β |
| Association study of NRXN3 polymorphisms with schizophrenia and risperidone-induced bodyweight gain in Chinese Han population. | Hu X et al. | β | 2013 | β |
| Dances with black widow spiders: dysregulation of glutamate signalling enters centre stage in ADHD. | Lesch KP et al. | β | 2013 | β |
| Implications of genome wide association studies for addiction: are our a priori assumptions all wrong? | Hall FS et al. | β | 2013 | β |
| The adhesion-GPCR BAI3, a gene linked to psychiatric disorders, regulates dendrite morphogenesis in neurons. | Lanoue V et al. | β | 2013 | β |
| The genetics of alcohol dependence. | Rietschel M et al. | β | 2013 | β |
| A common genetic network underlies substance use disorders and disruptive or externalizing disorders. | Arcos-Burgos M et al. | β | 2012 | β |
| ANKRD7 and CYTL1 are novel risk genes for alcohol drinking behavior. | Chen XD et al. | β | 2012 | β |
| Genome-wide association study of d-amphetamine response in healthy volunteers identifies putative associations, including cadherin 13 (CDH13). | Hart AB et al. | β | 2012 | β |
| Initial characterization of mice null for Lphn3, a gene implicated in ADHD and addiction. | Wallis D et al. | β | 2012 | β |
| Pathway analysis of smoking quantity in multiple GWAS identifies cholinergic and sensory pathways. | Harari O et al. | β | 2012 | β |
| The ADHD-susceptibility gene lphn3.1 modulates dopaminergic neuron formation and locomotor activity during zebrafish development. | Lange M et al. | β | 2012 | β |
| The genetic basis of alcoholism: multiple phenotypes, many genes, complex networks. | Morozova TV et al. | β | 2012 | β |
| A lifetime of attention-deficit/hyperactivity disorder: diagnostic challenges, treatment and neurobiological mechanisms. | Geissler J et al. | β | 2011 | β |
| Confirmation of prior evidence of genetic susceptibility to alcoholism in a genome-wide association study of comorbid alcoholism and bipolar disorder. | Lydall GJ et al. | β | 2011 | β |
| Genome-wide association studies identify genetic loci related to alcohol consumption in Korean men. | Baik I et al. | β | 2011 | β |
| Genome-wide association studies of alcohol dependence and substance use disorders. | Treutlein J et al. | β | 2011 | β |
| Genomic regions identified by overlapping clusters of nominally-positive SNPs from genome-wide studies of alcohol and illegal substance dependence. | Johnson C et al. | β | 2011 | β |
| In silico prediction of deleterious single amino acid polymorphisms from amino acid sequence. | Li S et al. | β | 2011 | β |
| Involvement of the atrial natriuretic peptide transcription factor GATA4 in alcohol dependence, relapse risk and treatment response to acamprosate. | Kiefer F et al. | β | 2011 | β |
| Meta-analysis and genome-wide interpretation of genetic susceptibility to drug addiction. | Li CY et al. | β | 2011 | β |
| Modulation of cell adhesion systems by prenatal nicotine exposure in limbic brain regions of adolescent female rats. | Cao J et al. | β | 2011 | β |
| "Replicated" genome wide association for dependence on illegal substances: genomic regions identified by overlapping clusters of nominally positive SNPs. | Drgon T et al. | β | 2011 | β |
| The complement control-related genes CSMD1 and CSMD2 associate to schizophrenia. | HΓ₯vik B et al. | β | 2011 | β |
| A genomewide association study of nicotine and alcohol dependence in Australian and Dutch populations. | Lind PA et al. | β | 2010 | β |
| ChIP-chip analysis of neurexins and other candidate genes for addiction and neuropsychiatric disorders. | Pedrosa E et al. | β | 2010 | β |
| Genome wide association for addiction: replicated results and comparisons of two analytic approaches. | Drgon T et al. | β | 2010 | β |
| Genome-wide association for smoking cessation success in a trial of precessation nicotine replacement. | Uhl GR et al. | β | 2010 | β |
| Genome-wide association for smoking cessation success: participants in the Patch in Practice trial of nicotine replacement. | Uhl GR et al. | β | 2010 | β |
| Genome-wide association study identifies genes that may contribute to risk for developing heroin addiction. | Nielsen DA et al. | β | 2010 | β |
| Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. | Rose JE et al. | β | 2010 | β |
| Pharmacogenetics: a tool for identifying genetic factors in drug dependence and response to treatment. | Mroziewicz M et al. | β | 2010 | β |
| Pharmacogenetics of drug dependence: role of gene variations in susceptibility and treatment. | Khokhar JY et al. | β | 2010 | β |
| Rare NRXN1 promoter variants in patients with schizophrenia. | Shah AK et al. | β | 2010 | β |
| Search for genetic markers and functional variants involved in the development of opiate and cocaine addiction and treatment. | Yuferov V et al. | β | 2010 | β |
| Transgenic mice in the study of drug addiction and the effects of psychostimulant drugs. | Sora I et al. | β | 2010 | β |
| Utility of the pooling approach as applied to whole genome association scans with high-density Affymetrix microarrays. | Schosser A et al. | β | 2010 | β |
| Voxelwise genome-wide association study (vGWAS). | Stein JL et al. | β | 2010 | β |
| A comparison of association statistics between pooled and individual genotypes. | Knight J et al. | β | 2009 | β |
| Addiction genetics and pleiotropic effects of common haplotypes that make polygenic contributions to vulnerability to substance dependence. | Uhl GR et al. | β | 2009 | β |
| An open access database of genome-wide association results. | Johnson AD et al. | β | 2009 | β |
| Association of a polymorphism in the NRXN3 gene with the degree of smoking in schizophrenia: a preliminary study. | Novak G et al. | β | 2009 | β |
| Convergent genome wide association results for bipolar disorder and substance dependence. | Johnson C et al. | β | 2009 | β |
| Genetic association studies of methamphetamine use disorders: A systematic review and synthesis. | Bousman CA et al. | β | 2009 | β |
| Genome-wide association for nicotine dependence and smoking cessation success in NIH research volunteers. | Drgon T et al. | β | 2009 | β |
| Genome-wide association for smoking cessation success: participants in a trial with adjunctive denicotinized cigarettes. | Drgon T et al. | β | 2009 | β |
| Genome-wide association study of smoking initiation and current smoking. | Vink JM et al. | β | 2009 | β |
| Interacting haplotypes at the NPAS3 locus alter risk of schizophrenia and bipolar disorder. | Pickard BS et al. | β | 2009 | β |
| Management of injecting drug users admitted to hospital. | Haber PS et al. | β | 2009 | β |
| OKCAM: an ontology-based, human-centered knowledgebase for cell adhesion molecules. | Li CY et al. | β | 2009 | β |
| Opiate and cocaine addiction: from bench to clinic and back to the bench. | Kreek MJ et al. | β | 2009 | β |
| Addiction Reviews. Preface. | Uhl GR | β | 2008 | β |
| Addictions biology: haplotype-based analysis for 130 candidate genes on a single array. | Hodgkinson CA et al. | β | 2008 | β |
| Are there genetic influences on addiction: evidence from family, adoption and twin studies. | Agrawal A et al. | β | 2008 | β |
| Association of PTPRB gene polymorphism with drug addiction. | Ishiguro H et al. | β | 2008 | β |
| Autosomal linkage analysis for cannabis use behaviors in Australian adults. | Agrawal A et al. | β | 2008 | β |
| Genome wide association for substance dependence: convergent results from epidemiologic and research volunteer samples. | Johnson C et al. | β | 2008 | β |
| Genotype patterns that contribute to increased risk for or protection from developing heroin addiction. | Nielsen DA et al. | β | 2008 | β |
| "Higher order" addiction molecular genetics: convergent data from genome-wide association in humans and mice. | Uhl GR et al. | β | 2008 | β |
| Linkage scan for quantitative traits identifies new regions of interest for substance dependence in the Collaborative Study on the Genetics of Alcoholism (COGA) sample. | Agrawal A et al. | β | 2008 | β |
| Molecular genetics of addiction and related heritable phenotypes: genome-wide association approaches identify "connectivity constellation" and drug target genes with pleiotropic effects. | Uhl GR et al. | β | 2008 | β |
| Molecular genetics of adult ADHD: converging evidence from genome-wide association and extended pedigree linkage studies. | Lesch KP et al. | β | 2008 | β |
| Molecular genetics of successful smoking cessation: convergent genome-wide association study results. | Uhl GR et al. | β | 2008 | β |
| Psychiatric research: psychoproteomics, degradomics and systems biology. | Kobeissy FH et al. | β | 2008 | β |
| The genomic determinants of alcohol preference in mice. | Tabakoff B et al. | β | 2008 | β |
| Finding new structural and sequence attributes to predict possible disease association of single amino acid polymorphism (SAP). | Ye ZQ et al. | β | 2007 | β |
| Gene expression in human hippocampus from cocaine abusers identifies genes which regulate extracellular matrix remodeling. | Mash DC et al. | β | 2007 | β |
| Genomewide suggestive linkage of opioid dependence to chromosome 14q. | Lachman HM et al. | β | 2007 | β |
| Molecular genetics of nicotine dependence and abstinence: whole genome association using 520,000 SNPs. | Uhl GR et al. | β | 2007 | β |
| Neurexin 3 polymorphisms are associated with alcohol dependence and altered expression of specific isoforms. | Hishimoto A et al. | β | 2007 | β |