General quantitative genetic methods for comparative biology: phylogenies, taxonomies and multi-trait models for continuous and categorical characters.
paper
Cited
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- Authors
- Hadfield, J D; Nakagawa, S
- Year
- 2010
- Journal
- Journal of evolutionary biology
- PMID
- 20070460
- DOI
- 10.1111/j.1420-9101.2009.01915.x
Although many of the statistical techniques used in comparative biology were originally developed in quantitative genetics, subsequent development of comparative techniques has progressed in relative isolation. Consequently, many of the new and planned developments in comparative analysis already have well-tested solutions in quantitative genetics. In this paper, we take three recent publications that develop phylogenetic meta-analysis, either implicitly or explicitly, and show how they can be considered as quantitative genetic models. We highlight some of the difficulties with the proposed solutions, and demonstrate that standard quantitative genetic theory and software offer solutions. We also show how results from Bayesian quantitative genetics can be used to create efficient Markov chain Monte Carlo algorithms for phylogenetic mixed models, thereby extending their generality to non-Gaussian data. Of particular utility is the development of multinomial models for analysing the evolution of discrete traits, and the development of multi-trait models in which traits can follow different distributions. Meta-analyses often include a nonrandom collection of species for which the full phylogenetic tree has only been partly resolved. Using missing data theory, we show how the presented models can be used to correct for nonrandom sampling and show how taxonomies and phylogenies can be combined to give a flexible framework with which to model dependence.
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| Coevolution of vocal signal characteristics and hearing sensitivity in forest mammals. | Charlton BD et al. | — | 2019 | → |
| Deeply conserved susceptibility in a multi-host, multi-parasite system. | Barrow LN et al. | — | 2019 | → |
| Detecting Adaptive Differentiation in Structured Populations with Genomic Data and Common Gardens. | Josephs EB et al. | — | 2019 | → |
| Diverging phenological responses of Arctic seabirds to an earlier spring. | Descamps S et al. | — | 2019 | → |
| Ecological associations among epidermal microstructure and scale characteristics of Australian geckos (Squamata: Carphodactylidae and Diplodactylidae). | Riedel J et al. | — | 2019 | → |
| Estimating Correlated Rates of Trait Evolution with Uncertainty. | Caetano DS et al. | — | 2019 | → |
| Evolution of Copy Number at the MHC Varies across the Avian Tree of Life. | Minias P et al. | — | 2019 | → |
| Evolution of heterophil/lymphocyte ratios in response to ecological and life-history traits: A comparative analysis across the avian tree of life. | Minias P | — | 2019 | → |
| How to analyse plant phenotypic plasticity in response to a changing climate. | Arnold PA et al. | — | 2019 | → |
| Integrating natural history collections and comparative genomics to study the genetic architecture of convergent evolution. | Lamichhaney S et al. | — | 2019 | → |
| Linking life-history theory and metabolic theory explains the offspring size-temperature relationship. | Pettersen AK et al. | — | 2019 | → |
| Male morphological traits are heritable but do not predict reproductive success in a sexually-dimorphic primate. | Kimock CM et al. | — | 2019 | → |
| Many Options, Few Solutions: Over 60 My Snakes Converged on a Few Optimal Venom Formulations. | Barua A et al. | — | 2019 | → |
| Multi-trait multi-environment models in the genetic selection of segregating soybean progeny. | Volpato L et al. | — | 2019 | → |
| Niche Estimation Above and Below the Species Level. | Smith AB et al. | — | 2019 | → |
| Pest Arthropods with Holocentric Chromosomes are More Resistant to Sterilizing Ionizing Radiation. | Zedek F et al. | — | 2019 | → |
| Phylogenetic mapping of scale nanostructure diversity in snakes. | Arrigo MI et al. | — | 2019 | → |
| Population genomics perspectives on convergent adaptation. | Lee KM et al. | — | 2019 | → |
| Predicting future invaders and future invasions. | Fournier A et al. | — | 2019 | → |
| Range of motion in the avian wing is strongly associated with flight behavior and body mass. | Baliga VB et al. | — | 2019 | → |
| Sexual selection predicts the rate and direction of colour divergence in a large avian radiation. | Cooney CR et al. | — | 2019 | → |
| Snake venom potency and yield are associated with prey-evolution, predator metabolism and habitat structure. | Healy K et al. | — | 2019 | → |
| Terrestrial locomotion energy costs vary considerably between species: no evidence that this is explained by rate of leg force production or ecology. | Halsey LG et al. | — | 2019 | → |
| The covariance between metabolic rate and behaviour varies across behaviours and thermal types: meta-analytic insights. | Mathot KJ et al. | — | 2019 | → |
| The effect of insularity on avian growth rates and implications for insular body size evolution. | Sandvig EM et al. | — | 2019 | → |
| The evolution of abdominal microbiomes in fungus-growing ants. | Sapountzis P et al. | — | 2019 | → |
| The evolution of infanticide by females in mammals. | Lukas D et al. | — | 2019 | → |
| The origin and maintenance of metabolic allometry in animals. | White CR et al. | — | 2019 | → |
| Thermal tolerance patterns across latitude and elevation. | Sunday J et al. | — | 2019 | → |
| Wrist morphology reveals substantial locomotor diversity among early catarrhines: an analysis of capitates from the early Miocene of Tinderet (Kenya). | Wuthrich C et al. | — | 2019 | → |
| A model to estimate seabird field metabolic rates. | Dunn RE et al. | — | 2018 | → |
| An Assessment of Phylogenetic Tools for Analyzing the Interplay Between Interspecific Interactions and Phenotypic Evolution. | Drury JP et al. | — | 2018 | → |
| A phylogenetic comparative method for evaluating trait coevolution across two phylogenies for sets of interacting species. | Adams DC et al. | — | 2018 | → |
| A widespread thermodynamic effect, but maintenance of biological rates through space across life's major domains. | Sørensen JG et al. | — | 2018 | → |
| Carotenoid metabolism strengthens the link between feather coloration and individual quality. | Weaver RJ et al. | — | 2018 | → |
| Causes and consequences of variation in offspring body mass: meta-analyses in birds and mammals. | Ronget V et al. | — | 2018 | → |
| Comparative analyses of basal rate of metabolism in mammals: data selection does matter. | Genoud M et al. | — | 2018 | → |
| Do Seasonal Glucocorticoid Changes Depend on Reproductive Investment? A Comparative Approach in Birds. | Casagrande S et al. | — | 2018 | → |
| Ecological opportunity may facilitate diversification in Palearctic freshwater organisms: a case study on hydrobiid gastropods. | Delicado D et al. | — | 2018 | → |
| Ecological specialization is associated with genetic structure in the ant-associated butterfly family Lycaenidae. | Schär S et al. | — | 2018 | → |
| Evidence for dispersal syndromes in freshwater fishes. | Comte L et al. | — | 2018 | → |
| Fish reproductive-energy output increases disproportionately with body size. | Barneche DR et al. | — | 2018 | → |
| Impact of prenatal stress on offspring glucocorticoid levels: A phylogenetic meta-analysis across 14 vertebrate species. | Thayer ZM et al. | — | 2018 | → |
| Impact of sexually antagonistic genital morphologies on female reproduction and wild population demography. | Takami Y et al. | — | 2018 | → |
| Intergenerational effects of nutrition on immunity: a systematic review and meta-analysis. | Grueber CE et al. | — | 2018 | → |
| Legs of male fiddler crabs evolved to compensate for claw exaggeration and enhance claw functionality during waving displays. | Bywater CL et al. | — | 2018 | → |
| Linking personality and cognition: a meta-analysis. | Dougherty LR et al. | — | 2018 | → |
| Meta-analysis and the science of research synthesis. | Gurevitch J et al. | — | 2018 | → |
| Meta-analysis challenges a textbook example of status signalling and demonstrates publication bias. | Sánchez-Tójar A et al. | — | 2018 | → |
| Meta-analysis of lamb birth weight as influenced by pregnancy nutrition of multiparous ewes. | Roca Fraga FJ et al. | — | 2018 | → |
| Metabolic physiology explains macroevolutionary trends in the melanic colour system across amniotes. | Eliason CM et al. | — | 2018 | → |
| Metrics matter: the effect of parasite richness, intensity and prevalence on the evolution of host migration. | Shaw AK et al. | — | 2018 | → |
| Multi-trait multi-environment Bayesian model reveals G x E interaction for nitrogen use efficiency components in tropical maize. | Torres LG et al. | — | 2018 | → |
| Parental habituation to human disturbance over time reduces fear of humans in coyote offspring. | Schell CJ et al. | — | 2018 | → |
| Phylogenetic comparative methods: Harnessing the power of species diversity to investigate welfare issues in captive wild animals. | Mellor E et al. | — | 2018 | → |
| Phylogenetic homogenization of amphibian assemblages in human-altered habitats across the globe. | Nowakowski AJ et al. | — | 2018 | → |
| Phylogeny and source climate impact seed dormancy and germination of restoration-relevant forb species. | Seglias AE et al. | — | 2018 | → |
| Rethinking phylogenetic comparative methods. | Uyeda JC et al. | — | 2018 | → |
| Sex differences in life history, behavior, and physiology along a slow-fast continuum: a meta-analysis. | Tarka M et al. | — | 2018 | → |
| Social complexity and kinship in animal societies. | Lukas D et al. | — | 2018 | → |
| The macroecological dynamics of species coexistence in birds. | Pigot AL et al. | — | 2018 | → |
| The response to selection in Glycoside Hydrolase Family 13 structures: A comparative quantitative genetics approach. | Hleap JS et al. | — | 2018 | → |
| Toward Understanding the Repeated Occurrence of Associations between Melanin-Based Coloration and Multiple Phenotypes. | San-Jose LM et al. | — | 2018 | → |
| Tracking of Host Defenses and Phylogeny During the Radiation of Neotropical <i>Inga</i>-Feeding Sawflies (Hymenoptera; Argidae). | Endara MJ et al. | — | 2018 | → |
| You stay, but I Hop: Host shifting near and far co-dominated the evolution of <i>Enchenopa</i> treehoppers. | Hsu YH et al. | — | 2018 | → |
| A different angle: comparative analyses of whole-animal transport costs when running uphill. | Halsey LG et al. | — | 2017 | → |
| Allopreening in birds is associated with parental cooperation over offspring care and stable pair bonds across years. | Kenny E et al. | — | 2017 | → |
| Amphibian species traits, evolutionary history and environment predict <i>Batrachochytrium dendrobatidis</i> infection patterns, but not extinction risk. | Greenberg DA et al. | — | 2017 | → |
| Are long-term widespread avian body size changes related to food availability? A test using contemporaneous changes in carotenoid-based color. | Little R et al. | — | 2017 | → |
| Brain size evolution in pipefishes and seahorses: the role of feeding ecology, life history and sexual selection. | Tsuboi M et al. | — | 2017 | → |
| Changes in human skull morphology across the agricultural transition are consistent with softer diets in preindustrial farming groups. | Katz DC et al. | — | 2017 | → |
| Coevolution of cultural intelligence, extended life history, sociality, and brain size in primates. | Street SE et al. | — | 2017 | → |
| Conspicuous plumage colours are highly variable. | Delhey K et al. | — | 2017 | → |
| Count Bayesian models for genetic analysis of in vitro embryo production traits in Guzerá cattle. | Perez BC et al. | — | 2017 | → |
| Divergent demographic strategies of plants in variable environments. | McDonald JL et al. | — | 2017 | → |
| Evolutionary associations between host traits and parasite load: insights from Lake Tanganyika cichlids. | Hayward A et al. | — | 2017 | → |
| Factors contributing to the accumulation of reproductive isolation: A mixed model approach. | Castillo DM | — | 2017 | → |
| Facultative adjustment of the offspring sex ratio and male attractiveness: a systematic review and meta-analysis. | Booksmythe I et al. | — | 2017 | → |
| Family living sets the stage for cooperative breeding and ecological resilience in birds. | Griesser M et al. | — | 2017 | → |
| Growth rate, transmission mode and virulence in human pathogens. | Leggett HC et al. | — | 2017 | → |
| Macroecology of parental care in arthropods: higher mortality risk leads to higher benefits of offspring protection in tropical climates. | Santos ESA et al. | — | 2017 | → |
| Meta-evaluation of meta-analysis: ten appraisal questions for biologists. | Nakagawa S et al. | — | 2017 | → |
| Modelling Mixed Types of Outcomes in Additive Genetic Models. | Hugo Bonat W | — | 2017 | → |
| Mutation predicts 40 million years of fly wing evolution. | Houle D et al. | — | 2017 | → |
| Natural variation in life history strategy of Arabidopsis thaliana determines stress responses to drought and insects of different feeding guilds. | Davila Olivas NH et al. | — | 2017 | → |
| Nonindependence and sensitivity analyses in ecological and evolutionary meta-analyses. | Noble DWA et al. | — | 2017 | → |
| Patterns of MHC-dependent mate selection in humans and nonhuman primates: a meta-analysis. | Winternitz J et al. | — | 2017 | → |
| Phytoplankton size-scaling of net-energy flux across light and biomass gradients. | Malerba ME et al. | — | 2017 | → |
| Progesterone Response Element Variation in the OXTR Promoter Region and Paternal Care in New World Monkeys. | Vargas-Pinilla P et al. | — | 2017 | → |
| Rapid maximum likelihood ancestral state reconstruction of continuous characters: A rerooting-free algorithm. | Goolsby EW | — | 2017 | → |
| Species identity and depth predict bleaching severity in reef-building corals: shall the deep inherit the reef? | Muir PR et al. | — | 2017 | → |
| Temporal shifts and temperature sensitivity of avian spring migratory phenology: a phylogenetic meta-analysis. | Usui T et al. | — | 2017 | → |
| The effects of sex hormones on immune function: a meta-analysis. | Foo YZ et al. | — | 2017 | → |
| Tropical insect diversity: evidence of greater host specialization in seed-feeding weevils. | Peguero G et al. | — | 2017 | → |
| Uncovering Higher-Taxon Diversification Dynamics from Clade Age and Species-Richness Data. | Sánchez-Reyes LL et al. | — | 2017 | → |
| Allometric scaling of the elevation of maternal energy intake during lactation. | Douhard F et al. | — | 2016 | → |
| A mixed model for the relationship between climate and human cranial form. | Katz DC et al. | — | 2016 | → |
| Bayesian Inference of the Evolution of a Phenotype Distribution on a Phylogenetic Tree. | Ansari MA et al. | — | 2016 | → |
| Brain size predicts problem-solving ability in mammalian carnivores. | Benson-Amram S et al. | — | 2016 | → |
| Contrasting effects of temperature and precipitation change on amphibian phenology, abundance and performance. | Ficetola GF et al. | — | 2016 | → |
| Decoupled genomic elements and the evolution of partner quality in nitrogen-fixing rhizobia. | Gordon BR et al. | — | 2016 | → |
| Effect of maternal diet on offspring coping styles in rodents: a systematic review and meta-analysis. | Besson AA et al. | — | 2016 | → |
| Energetic Constraints on Species Coexistence in Birds. | Pigot AL et al. | — | 2016 | → |
| Escape from the cryptic species trap: lichen evolution on both sides of a cyanobacterial acquisition event. | Schneider K et al. | — | 2016 | → |
| Evolutionary modeling and correcting for observation error support a 3/5 brain-body allometry for primates. | Grabowski M et al. | — | 2016 | → |
| Evolutionary shifts in the melanin-based color system of birds. | Eliason CM et al. | — | 2016 | → |
| Heterogeneity in ecological and evolutionary meta-analyses: its magnitude and implications. | Senior AM et al. | — | 2016 | → |
| Independent evolution of shape and motility allows evolutionary flexibility in Firmicutes bacteria. | El Baidouri F et al. | — | 2016 | → |
| Mate guarding and frequent copulation in birds: A meta-analysis of their relationship to paternity and male phenotype. | Harts AM et al. | — | 2016 | → |
| Men's status and reproductive success in 33 nonindustrial societies: Effects of subsistence, marriage system, and reproductive strategy. | von Rueden CR et al. | — | 2016 | → |
| Micro- and Macroevolutionary Trade-Offs in Plant-Feeding Insects. | Peterson DA et al. | — | 2016 | → |
| MycoDB, a global database of plant response to mycorrhizal fungi. | Chaudhary VB et al. | — | 2016 | → |
| On bias and precision in meta-analysis: the error in the error. | Hansen TF | — | 2016 | → |
| Ontogenetic Allometry in Shape and Flexibility Underlies Life History Patterns of Labrid Cleaning Behavior. | Baliga VB et al. | — | 2016 | → |
| Revealing new candidate genes for reproductive traits in pigs: combining Bayesian GWAS and functional pathways. | Verardo LL et al. | — | 2016 | → |
| Selection, constraint, and the evolution of coloration in African starlings. | Maia R et al. | — | 2016 | → |
| The ecological and evolutionary stability of interspecific territoriality. | Losin N et al. | — | 2016 | → |
| The ecology of sex explains patterns of helping in arthropod societies. | Davies NG et al. | — | 2016 | → |
| The effect of dietary restriction on reproduction: a meta-analytic perspective. | Moatt JP et al. | — | 2016 | → |
| The evolution of anthropoid molar proportions. | Carter KE et al. | — | 2016 | → |
| The life-history basis of behavioural innovations. | Sol D et al. | — | 2016 | → |
| Transients drive the demographic dynamics of plant populations in variable environments. | McDonald JL et al. | — | 2016 | → |
| Widespread correlations between climatic niche evolution and species diversification in birds. | Cooney CR et al. | — | 2016 | → |
| An Overlooked Consequence of Dietary Mixing: A Varied Diet Reduces Interindividual Variance in Fitness. | Senior AM et al. | — | 2015 | → |
| Are extra-pair males different from cuckolded males? A case study and a meta-analytic examination. | Hsu YH et al. | — | 2015 | → |
| ASSESSING PHENOTYPIC CORRELATION THROUGH THE MULTIVARIATE PHYLOGENETIC LATENT LIABILITY MODEL. | Cybis GB et al. | — | 2015 | → |
| Autumn, the neglected season in climate change research. | Gallinat AS et al. | — | 2015 | → |
| Comparative support for the expensive tissue hypothesis: Big brains are correlated with smaller gut and greater parental investment in Lake Tanganyika cichlids. | Tsuboi M et al. | — | 2015 | → |
| Direct benefits of mate choice: a meta-analysis of plumage colour and offspring feeding rates in birds. | Hegyi G et al. | — | 2015 | → |
| Functional Traits in Parallel Evolutionary Radiations and Trait-Environment Associations in the Cape Floristic Region of South Africa. | Mitchell N et al. | — | 2015 | → |
| Genetic variation underlying resistance to infectious hematopoietic necrosis virus in a steelhead trout (Oncorhynchus mykiss) population. | Brieuc MS et al. | — | 2015 | → |
| Geometry of nutrition in field studies: an illustration using wild primates. | Raubenheimer D et al. | — | 2015 | → |
| How to critically read ecological meta-analyses. | Lortie CJ et al. | — | 2015 | → |
| HOW TO STUDY ADAPTATION (AND WHY TO DO IT THAT WAY). | Olson ME et al. | — | 2015 | → |
| Impacts of local adaptation of forest trees on associations with herbivorous insects: implications for adaptive forest management. | Sinclair FH et al. | — | 2015 | → |
| Independent evolution of the sexes promotes amphibian diversification. | De Lisle SP et al. | — | 2015 | → |
| Insect life history and the evolution of bacterial mutualism. | Henry LM et al. | — | 2015 | → |
| Little appetite for obesity: meta-analysis of the effects of maternal obesogenic diets on offspring food intake and body mass in rodents. | Lagisz M et al. | — | 2015 | → |
| MHC variation reflects the bottleneck histories of New Zealand passerines. | Sutton JT et al. | — | 2015 | → |
| Model Adequacy and the Macroevolution of Angiosperm Functional Traits. | Pennell MW et al. | — | 2015 | → |
| Pan-vertebrate comparative genomics unmasks retrovirus macroevolution. | Hayward A et al. | — | 2015 | → |
| Recombination, chromosome number and eusociality in the Hymenoptera. | Ross L et al. | — | 2015 | → |
| Relation between flower head traits and florivory in Asteraceae: a phylogenetically controlled approach. | Oguro M et al. | — | 2015 | → |
| Sex, long life and the evolutionary transition to cooperative breeding in birds. | Downing PA et al. | — | 2015 | → |
| Similarities in butterfly emergence dates among populations suggest local adaptation to climate. | Roy DB et al. | — | 2015 | → |
| Species Selection Favors Dispersive Life Histories in Sea Slugs, but Higher Per-Offspring Investment Drives Shifts to Short-Lived Larvae. | Krug PJ et al. | — | 2015 | → |
| The causes and consequences of changes in virulence following pathogen host shifts. | Longdon B et al. | — | 2015 | → |
| The evolutionary dynamics of haplodiploidy: Genome architecture and haploid viability. | Blackmon H et al. | — | 2015 | → |
| The role of pollinators in floral diversification in a clade of generalist flowers. | Gómez JM et al. | — | 2015 | → |
| The unsolved challenge to phylogenetic correlation tests for categorical characters. | Maddison WP et al. | — | 2015 | → |
| Towards a general framework for predicting threat status of data-deficient species from phylogenetic, spatial and environmental information. | Jetz W et al. | — | 2015 | → |
| Trading up: the fitness consequences of divorce in monogamous birds. | Culina A et al. | — | 2015 | → |
| Understanding the biological invasion risk posed by the global wildlife trade: propagule pressure drives the introduction and establishment of Nearctic turtles. | García-Díaz P et al. | — | 2015 | → |
| What do molecular methods bring to host-parasitoid food webs? | Hrček J et al. | — | 2015 | → |
| A linear-time algorithm for Gaussian and non-Gaussian trait evolution models. | Ho Ls et al. | — | 2014 | → |
| All eggs are made equal: meta-analysis of egg sexual size dimorphism in birds. | Rutkowska J et al. | — | 2014 | → |
| A molecular signaling approach to linking intraspecific variation and macro-evolutionary patterns. | Swanson EM et al. | — | 2014 | → |
| Applying Quantitative Genetic Methods to Primate Social Behavior. | Blomquist GE et al. | — | 2014 | → |
| A quantitative review of MHC-based mating preference: the role of diversity and dissimilarity. | Kamiya T et al. | — | 2014 | → |
| A tale of two phylogenies: comparative analyses of ecological interactions. | Hadfield JD et al. | — | 2014 | → |
| Costs of mating competition limit male lifetime breeding success in polygynous mammals. | Lukas D et al. | — | 2014 | → |
| Effect of body condition on tissue distribution of perfluoroalkyl substances (PFASs) in Arctic fox (Vulpes lagopus). | Aas CB et al. | — | 2014 | → |
| Evolution of pollination niches and floral divergence in the generalist plant Erysimum mediohispanicum. | Gómez JM et al. | — | 2014 | → |
| Experimental food restriction reveals individual differences in corticosterone reaction norms with no oxidative costs. | Lendvai AZ et al. | — | 2014 | → |
| Genetic constraints predict evolutionary divergence in Dalechampia blossoms. | Bolstad GH et al. | — | 2014 | → |
| Heterogeneity in individual quality and reproductive trade-offs within species. | Lim JN et al. | — | 2014 | → |
| How body mass and lifestyle affect juvenile biomass production in placental mammals. | Sibly RM et al. | — | 2014 | → |
| Individual variation in thermal performance curves: swimming burst speed and jumping endurance in wild-caught tropical clawed frogs. | Careau V et al. | — | 2014 | → |
| Insights on the evolution of plant succulence from a remarkable radiation in Madagascar (Euphorbia). | Evans M et al. | — | 2014 | → |
| Metabolic scaling in animals: methods, empirical results, and theoretical explanations. | White CR et al. | — | 2014 | → |
| Relationships between adaptive and neutral genetic diversity and ecological structure and functioning: a meta-analysis. | Whitlock R | — | 2014 | → |
| Sexual conflict. The evolution of infanticide by males in mammalian societies. | Lukas D et al. | — | 2014 | → |
| Species coexistence and the dynamics of phenotypic evolution in adaptive radiation. | Tobias JA et al. | — | 2014 | → |
| Symbionts commonly provide broad spectrum resistance to viruses in insects: a comparative analysis of Wolbachia strains. | Martinez J et al. | — | 2014 | → |
| Testing hypotheses in ecoimmunology using mixed models: disentangling hierarchical correlations. | Downs CJ et al. | — | 2014 | → |
| The contribution of viral genotype to plasma viral set-point in HIV infection. | Hodcroft E et al. | — | 2014 | → |
| Transgenerational effects of caloric restriction on appetite: a meta-analysis. | Lagisz M et al. | — | 2014 | → |
| Urbanisation tolerance and the loss of avian diversity. | Sol D et al. | — | 2014 | → |
| ACTN3 allele frequency in humans covaries with global latitudinal gradient. | Friedlander SM et al. | — | 2013 | → |
| A genome-wide association study of alcohol-dependence symptom counts in extended pedigrees identifies C15orf53. | Wang JC et al. | — | 2013 | → |
| An integrative view of phylogenetic comparative methods: connections to population genetics, community ecology, and paleobiology. | Pennell MW et al. | — | 2013 | → |
| Bayesian inference of mixed models in quantitative genetics of crop species. | E Silva FF et al. | — | 2013 | → |
| Brains and the city in passerine birds: re-analysis and confirmation of the original result. | Maklakov AA et al. | — | 2013 | → |
| Colour-variable birds have broader ranges, wider niches and are less likely to be threatened. | Delhey K et al. | — | 2013 | → |
| Do smart birds stress less? An interspecific relationship between brain size and corticosterone levels. | Lendvai ÁZ et al. | — | 2013 | → |
| DRIFTSEL: an R package for detecting signals of natural selection in quantitative traits. | Karhunen M et al. | — | 2013 | → |
| Ecology, not the genetics of sex determination, determines who helps in eusocial populations. | Ross L et al. | — | 2013 | → |
| Environmental stability and the evolution of cooperative breeding in hornbills. | Gonzalez JC et al. | — | 2013 | → |
| Evolution of egg dummies in Tanganyikan cichlid fishes: the roles of parental care and sexual selection. | Amcoff M et al. | — | 2013 | → |
| Function-valued traits in evolution. | Hadjipantelis PZ et al. | — | 2013 | → |
| Images from a jointly-arousing collective ritual reveal affective polarization. | Bulbulia JA et al. | — | 2013 | → |
| Increased conspicuousness can explain the match between visual sensitivities and blue plumage colours in fairy-wrens. | Delhey K et al. | — | 2013 | → |
| Key ornamental innovations facilitate diversification in an avian radiation. | Maia R et al. | — | 2013 | → |
| Large population size predicts the distribution of asexuality in scale insects. | Ross L et al. | — | 2013 | → |
| Life extension after heat shock exposure: assessing meta-analytic evidence for hormesis. | Lagisz M et al. | — | 2013 | → |
| Multiple origins of sex chromosome fusions correlated with chiasma localization in Habronattus jumping spiders (Araneae: Salticidae). | Maddison WP et al. | — | 2013 | → |
| Predicting dispersal distance in mammals: a trait-based approach. | Whitmee S et al. | — | 2013 | → |
| Simulation-based likelihood approach for evolutionary models of phenotypic traits on phylogeny. | Kutsukake N et al. | — | 2013 | → |
| The evolution of social monogamy in mammals. | Lukas D et al. | — | 2013 | → |
| The stunting effect of a high CO2 ocean on calcification and development in sea urchin larvae, a synthesis from the tropics to the poles. | Byrne M et al. | — | 2013 | → |
| Weak evidence for anticipatory parental effects in plants and animals. | Uller T et al. | — | 2013 | → |
| What do we really know about the signalling role of plumage colour in blue tits? A case study of impediments to progress in evolutionary biology. | Parker TH | — | 2013 | → |
| Why do cuckolded males provide paternal care? | Griffin AS et al. | — | 2013 | → |
| Widespread evidence for incipient ecological speciation: a meta-analysis of isolation-by-ecology. | Shafer AB et al. | — | 2013 | → |
| You are where you live: parasitic nematode mitochondrial genome size is associated with the thermal environment generated by hosts. | Lagisz M et al. | — | 2013 | → |
| A comparative method for both discrete and continuous characters using the threshold model. | Felsenstein J | — | 2012 | → |
| A phylogenetic comparative method for studying multivariate adaptation. | Bartoszek K et al. | — | 2012 | → |
| Are range-size distributions consistent with species-level heritability? | Borregaard MK et al. | — | 2012 | → |
| Bayesian models for comparative analysis integrating phylogenetic uncertainty. | de Villemereuil P et al. | — | 2012 | → |
| Care for kin: within-group relatedness and allomaternal care are positively correlated and conserved throughout the mammalian phylogeny. | Briga M et al. | — | 2012 | → |
| Comparative and meta-analytic insights into life extension via dietary restriction. | Nakagawa S et al. | — | 2012 | → |
| Independent contrasts and PGLS regression estimators are equivalent. | Blomberg SP et al. | — | 2012 | → |
| Interpreting the evolutionary regression: the interplay between observational and biological errors in phylogenetic comparative studies. | Hansen TF et al. | — | 2012 | → |
| Life histories and the evolution of cooperative breeding in mammals. | Lukas D et al. | — | 2012 | → |
| Male quality, signal reliability and female choice: assessing the expectations of inter-sexual selection. | McLean MJ et al. | — | 2012 | → |
| Mechanisms of pathogenesis, infective dose and virulence in human parasites. | Leggett HC et al. | — | 2012 | → |
| Meta-analysis suggests choosy females get sexy sons more than "good genes". | Prokop ZM et al. | — | 2012 | → |
| Phylogenetic relatedness as a tool in restoration ecology: a meta-analysis. | Verdú M et al. | — | 2012 | → |
| Proteomic properties reveal phyloecological clusters of Archaea. | Nikolic N et al. | — | 2012 | → |
| Reduced mRNA secondary-structure stability near the start codon indicates functional genes in prokaryotes. | Keller TE et al. | — | 2012 | → |
| Strategic female reproductive investment in response to male attractiveness in birds. | Horváthová T et al. | — | 2012 | → |
| The costs of parental care: a meta-analysis of the trade-off between parental effort and survival in birds. | Santos ES et al. | — | 2012 | → |
| The effect of resveratrol on longevity across species: a meta-analysis. | Hector KL et al. | — | 2012 | → |
| The fitness consequences of environmental sex reversal in fish: a quantitative review. | Senior AM et al. | — | 2012 | → |
| The long and the short of avian W chromosomes: no evidence for gradual W shortening. | Rutkowska J et al. | — | 2012 | → |
| The majority of genetic variation in orangutan personality and subjective well-being is nonadditive. | Adams MJ et al. | — | 2012 | → |
| The role of endosymbionts in the evolution of haploid-male genetic systems in scale insects (Coccoidea). | Ross L et al. | — | 2012 | → |
| What does carotenoid-dependent coloration tell? Plasma carotenoid level signals immunocompetence and oxidative stress state in birds-A meta-analysis. | Simons MJ et al. | — | 2012 | → |
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| Between-year variation in population sex ratio increases with complexity of the breeding system in Hymenoptera. | Kümmerli R et al. | — | 2011 | → |
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