The expanding RNA polymerase III transcriptome.
paper
Cited
Public
Unavailable
- Authors
- Dieci, Giorgio; Fiorino, Gloria; Castelnuovo, Manuele; Teichmann, Martin; Pagano, Aldo
- Year
- 2007
- Journal
- Trends in genetics : TIG
- PMID
- 17977614
- DOI
- 10.1016/j.tig.2007.09.001
The role of RNA polymerase (Pol) III in eukaryotic transcription is commonly thought of as being restricted to a small set of highly expressed, housekeeping non-protein-coding (nc)RNA genes. Recent studies, however, have remarkably expanded the set of known Pol III-synthesized ncRNAs, suggesting that gene-specific Pol III regulation is more common than previously appreciated. Newly identified Pol III transcripts include small nucleolar RNAs, microRNAs, short interspersed nuclear element-encoded or tRNA-derived RNAs and novel classes of ncRNA that can display significant sequence complementarity to protein-coding genes and might thus regulate their expression. The extent of the Pol III transcriptome, the complexity of its regulation and its influence on cell physiology, development and disease are emerging as new areas for future research.
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| Structure and Function of RNA Polymerases and the Transcription Machineries. | Griesenbeck J et al. | β | 2017 | β |
| The Dimensions, Dynamics, and Relevance of the Mammalian Noncoding Transcriptome. | Deveson IW et al. | β | 2017 | β |
| U6 snRNA expression prevents toxicity in TDP-43-knockdown cells. | Yahara M et al. | β | 2017 | β |
| A partial loss-of-function mutation in an Arabidopsis RNA polymerase III subunit leads to pleiotropic defects. | Johnson KC et al. | β | 2016 | β |
| Combinatorial optimization of CRISPR/Cas9 expression enables precision genome engineering in the methylotrophic yeast Pichia pastoris. | Weninger A et al. | β | 2016 | β |
| Cytoskeletal Filamin A Differentially Modulates RNA Polymerase III Gene Transcription in Transformed Cell Lines. | Wang J et al. | β | 2016 | β |
| Dis3l2-Mediated Decay Is a Quality Control Pathway for Noncoding RNAs. | Pirouz M et al. | β | 2016 | β |
| Falling for the dark side of transcription: Nab2 fosters RNA polymerase III transcription. | Reuter LM et al. | β | 2016 | β |
| Intron sequences that stimulate gene expression in Arabidopsis. | Rose AB et al. | β | 2016 | β |
| Long Noncoding RNAs: An Overview. | Zhang D et al. | β | 2016 | β |
| Long Noncoding RNAs in Cardiovascular Pathology, Diagnosis, and Therapy. | BΓ€r C et al. | β | 2016 | β |
| Noncoding RNAs in breast cancer. | Lo PK et al. | β | 2016 | β |
| Noncoding RNAs: New Players in Cancers. | Chen X et al. | β | 2016 | β |
| RNA Polymerase III Advances: Structural and tRNA Functional Views. | Arimbasseri AG et al. | β | 2016 | β |
| RNA polymerase III component Rpc9 regulates hematopoietic stem and progenitor cell maintenance in zebrafish. | Wei Y et al. | β | 2016 | β |
| Sensing of latent EBV infection through exosomal transfer of 5'pppRNA. | Baglio SR et al. | β | 2016 | β |
| Specialization versus conservation: How Pol I and Pol III use the conserved architecture of the pre-initiation complex for specialized transcription. | Hoffmann NA et al. | β | 2016 | β |
| Transcribing RNA polymerase III observed by electron cryomicroscopy. | Hoffmann NA et al. | β | 2016 | β |
| Transcriptome-wide effects of a POLR3A gene mutation in patients with an unusual phenotype of striatal involvement. | Azmanov DN et al. | β | 2016 | β |
| Virus-induced gene silencing of the RPC5-like subunit of RNA polymerase III caused pleiotropic effects in Nicotiana benthamiana. | Nemchinov LG et al. | β | 2016 | β |
| Alteration of BRCA1 expression affects alcohol-induced transcription of RNA Pol III-dependent genes. | Zhong Q et al. | β | 2015 | β |
| Alu element-containing RNAs maintain nucleolar structure and function. | Caudron-Herger M et al. | β | 2015 | β |
| A Region of Bdp1 Necessary for Transcription Initiation That Is Located within the RNA Polymerase III Active Site Cleft. | Hu HL et al. | β | 2015 | β |
| Boosting CRISPR/Cas9 multiplex editing capability with the endogenous tRNA-processing system. | Xie K et al. | β | 2015 | β |
| BRF1, a subunit of RNA polymerase III transcription factor TFIIIB, is essential for cell growth of Trypanosoma brucei. | VΓ©lez-RamΓrez DE et al. | β | 2015 | β |
| Computational approaches towards understanding human long non-coding RNA biology. | Jalali S et al. | β | 2015 | β |
| Core promoters in transcription: old problem, new insights. | Roy AL et al. | β | 2015 | β |
| Distinct patterns of epigenetic marks and transcription factor binding sites across promoters of sense-intronic long noncoding RNAs. | Ghosh S et al. | β | 2015 | β |
| Dynamic and Widespread lncRNA Expression in a Sponge and the Origin of Animal Complexity. | Gaiti F et al. | β | 2015 | β |
| Editorial: Functions of Non-Coding RNA in Innate Immunity. | Carpenter S | β | 2015 | β |
| Endocrine Aspects of 4H Leukodystrophy: A Case Report and Review of the Literature. | Billington E et al. | β | 2015 | β |
| Epigenetic marks: regulators of livestock phenotypes and conceivable sources of missing variation in livestock improvement programs. | Ibeagha-Awemu EM et al. | β | 2015 | β |
| Genome-wide association study identifies multiple susceptibility loci for glioma. | Kinnersley B et al. | β | 2015 | β |
| Identification of a recently active mammalian SINE derived from ribosomal RNA. | Longo MS et al. | β | 2015 | β |
| Meta-Analysis of DNA Tumor-Viral Integration Site Selection Indicates a Role for Repeats, Gene Expression and Epigenetics. | Doolittle-Hall JM et al. | β | 2015 | β |
| Modifications of RNA polymerase II CTD: Connections to the histone code and cellular function. | Srivastava R et al. | β | 2015 | β |
| Molecular structures of unbound and transcribing RNA polymerase III. | Hoffmann NA et al. | β | 2015 | β |
| Noncoding RNAs as epigenetic mediators of skeletal muscle regeneration. | Sohi G et al. | β | 2015 | β |
| RNA polymerase III regulates cytosolic RNA:DNA hybrids and intracellular microRNA expression. | Koo CX et al. | β | 2015 | β |
| Roles of lncRNA in breast cancer. | Liu Y et al. | β | 2015 | β |
| Structural analysis of human RPC32Ξ²-RPC62 complex. | Boissier F et al. | β | 2015 | β |
| Subunit compositions of Arabidopsis RNA polymerases I and III reveal Pol I- and Pol III-specific forms of the AC40 subunit and alternative forms of the C53 subunit. | Ream TS et al. | β | 2015 | β |
| Targeting Non-Coding RNAs in Plants with the CRISPR-Cas Technology is a Challenge yet Worth Accepting. | Basak J et al. | β | 2015 | β |
| Transcriptome analyses of adult mouse brain reveal enrichment of lncRNAs in specific brain regions and neuronal populations. | Kadakkuzha BM et al. | β | 2015 | β |
| tRNA processing defects induce replication stress and Chk2-dependent disruption of piRNA transcription. | Molla-Herman A et al. | β | 2015 | β |
| Wnt activated Ξ²-catenin and YAP proteins enhance the expression of non-coding RNA component of RNase MRP in colon cancer cells. | Park J et al. | β | 2015 | β |
| A comprehensive tRNA deletion library unravels the genetic architecture of the tRNA pool. | Bloom-Ackermann Z et al. | β | 2014 | β |
| A conserved RNA polymerase III promoter required for gammaherpesvirus TMER transcription and microRNA processing. | Diebel KW et al. | β | 2014 | β |
| Class-specific prediction of ncRNAs. | Stadler PF | β | 2014 | β |
| Compromised RNA polymerase III complex assembly leads to local alterations of intergenic RNA polymerase II transcription in Saccharomyces cerevisiae. | Wang Q et al. | β | 2014 | β |
| Contributions of in vitro transcription to the understanding of human RNA polymerase III transcription. | Dumay-Odelot H et al. | β | 2014 | β |
| Databases for lncRNAs: a comparative evaluation of emerging tools. | Fritah S et al. | β | 2014 | β |
| Deficiency of the microRNA-31-microRNA-720 pathway in the plasma and endothelial progenitor cells from patients with coronary artery disease. | Wang HW et al. | β | 2014 | β |
| Different patterns of cerebellar abnormality and hypomyelination between POLR3A and POLR3B mutations. | Takanashi J et al. | β | 2014 | β |
| Gene expansion shapes genome architecture in the human pathogen Lichtheimia corymbifera: an evolutionary genomics analysis in the ancient terrestrial mucorales (Mucoromycotina). | Schwartze VU et al. | β | 2014 | β |
| Identification and analysis of large intergenic non-coding RNAs regulated by p53 family members through a genome-wide analysis of p53-binding sites. | Idogawa M et al. | β | 2014 | β |
| Identification of tri-phosphatase activity in the biogenesis of retroviral microRNAs and RNAP III-generated shRNAs. | Burke JM et al. | β | 2014 | β |
| Long noncoding RNAs, emerging players in muscle differentiation and disease. | Neguembor MV et al. | β | 2014 | β |
| Mapping the protein interaction network for TFIIB-related factor Brf1 in the RNA polymerase III preinitiation complex. | Khoo SK et al. | β | 2014 | β |
| Novel RNA markers in prostate cancer: functional considerations and clinical translation. | Pickl JM et al. | β | 2014 | β |
| Perspectives on the mechanism of transcriptional regulation by long non-coding RNAs. | Roberts TC et al. | β | 2014 | β |
| Potential for sexual conflict assessed via testosterone-mediated transcriptional changes in liver and muscle of a songbird. | Peterson MP et al. | β | 2014 | β |
| Protein kinase CK2 both promotes robust proliferation and inhibits the proliferative fate in the C. elegans germ line. | Wang X et al. | β | 2014 | β |
| Rescue of wild-type E-cadherin expression from nonsense-mutated cancer cells by a suppressor-tRNA. | Bordeira-CarriΓ§o R et al. | β | 2014 | β |
| RNAi-mediated knockdown of IKK1 in transgenic mice using a transgenic construct containing the human H1 promoter. | Moreno-Maldonado R et al. | β | 2014 | β |
| RNA Polymerase III promoter screen uncovers a novel noncoding RNA family conserved in Caenorhabditis and other clade V nematodes. | Gruber AR | β | 2014 | β |
| RNA polymerase III transcriptomes in human embryonic stem cells and induced pluripotent stem cells, and relationships with pluripotency transcription factors. | Alla RK et al. | β | 2014 | β |
| Single molecule fluorescence approaches shed light on intracellular RNAs. | Pitchiaya S et al. | β | 2014 | β |
| Small mitochondrial-targeted RNAs modulate endogenous mitochondrial protein expression in vivo. | Towheed A et al. | β | 2014 | β |
| The central role of noncoding RNA in the brain. | Guennewig B et al. | β | 2014 | β |
| Transcriptomic profile reveals gender-specific molecular mechanisms driving multiple sclerosis progression. | Irizar H et al. | β | 2014 | β |
| [A case of hypomyelinating leukodystrophy with new homozygous mutation in POLR3A]. | Tamura A et al. | β | 2013 | β |
| An intronic ncRNA-dependent regulation of SORL1 expression affecting AΞ² formation is upregulated in post-mortem Alzheimer's disease brain samples. | Ciarlo E et al. | β | 2013 | β |
| A novel snRNA-like transcript affects amyloidogenesis and cell cycle progression through perturbation of Fe65L1 (APBB2) alternative splicing. | Penna I et al. | β | 2013 | β |
| DNMT1-interacting RNAs block gene-specific DNA methylation. | Di Ruscio A et al. | β | 2013 | β |
| Dynamic phosphorylation patterns of RNA polymerase II CTD during transcription. | Heidemann M et al. | β | 2013 | β |
| Dysregulation of the basal RNA polymerase transcription apparatus in cancer. | Bywater MJ et al. | β | 2013 | β |
| Electroporation: past, present and future. | Nakamura H et al. | β | 2013 | β |
| Elk1 and AP-1 sites in the TBP promoter mediate alcohol-induced deregulation of Pol III-dependent genes. | Zhong Q et al. | β | 2013 | β |
| Epigenetic regulation of transcription by RNA polymerase III. | Bhargava P | β | 2013 | β |
| ERΞ± mediates alcohol-induced deregulation of Pol III genes in breast cancer cells. | Zhang Q et al. | β | 2013 | β |
| Genome-wide association study of Tourette's syndrome. | Scharf JM et al. | β | 2013 | β |
| Identification of RNA polymerase III-transcribed genes in eukaryotic genomes. | Dieci G et al. | β | 2013 | β |
| Interplay between polymerase II- and polymerase III-assisted expression of overlapping genes. | Lukoszek R et al. | β | 2013 | β |
| Long noncoding RNAs as metazoan developmental regulators. | Horabin JI | β | 2013 | β |
| Maf1, a general negative regulator of RNA polymerase III in yeast. | Boguta M | β | 2013 | β |
| miR-449a contributes to glucocorticoid-induced CRF-R1 downregulation in the pituitary during stress. | Nemoto T et al. | β | 2013 | β |
| More than hypomyelination in Pol-III disorder. | Vanderver A et al. | β | 2013 | β |
| Noncoding RNAs in chromatin organization and transcription regulation: an epigenetic view. | Dhanasekaran K et al. | β | 2013 | β |
| Non-polyadenylated transcription in embryonic stem cells reveals novel non-coding RNA related to pluripotency and differentiation. | Livyatan I et al. | β | 2013 | β |
| Overexpression of initiator methionine tRNA leads to global reprogramming of tRNA expression and increased proliferation in human epithelial cells. | Pavon-Eternod M et al. | β | 2013 | β |
| Pervasive transcription of the human genome produces thousands of previously unidentified long intergenic noncoding RNAs. | Hangauer MJ et al. | β | 2013 | β |
| Principles of miRNA-target regulation in metazoan models. | Doxakis E | β | 2013 | β |
| Regulation of pol III transcription by nutrient and stress signaling pathways. | Moir RD et al. | β | 2013 | β |
| Regulatory Roles for Long ncRNA and mRNA. | Karapetyan AR et al. | β | 2013 | β |
| RNA polymerase III transcription - regulated by chromatin structure and regulator of nuclear chromatin organization. | Pascali C et al. | β | 2013 | β |
| Role of phosphorylated histone H3 serine 10 in DEN-induced deregulation of Pol III genes and cell proliferation and transformation. | Zhong Q et al. | β | 2013 | β |
| Structure and function of long noncoding RNAs in epigenetic regulation. | Mercer TR et al. | β | 2013 | β |
| Transcriptional and epigenetic regulation of human microRNAs. | Wang Z et al. | β | 2013 | β |
| Transcription of the major neurospora crassa microRNA-like small RNAs relies on RNA polymerase III. | Yang Q et al. | β | 2013 | β |
| Transcription termination by the eukaryotic RNA polymerase III. | Arimbasseri AG et al. | β | 2013 | β |
| A novel collection of snRNA-like promoters with tissue-specific transcription properties. | Garritano S et al. | β | 2012 | β |
| Bioinformatics tools and novel challenges in long non-coding RNAs (lncRNAs) functional analysis. | Da Sacco L et al. | β | 2012 | β |
| Deep sequencing of RNA from immune cell-derived vesicles uncovers the selective incorporation of small non-coding RNA biotypes with potential regulatory functions. | Nolte-'t Hoen EN et al. | β | 2012 | β |
| Emerging Views on the CTD Code. | Zhang DW et al. | β | 2012 | β |
| Genomic binding of Pol III transcription machinery and relationship with TFIIS transcription factor distribution in mouse embryonic stem cells. | CarriΓ¨re L et al. | β | 2012 | β |
| Human tRNA genes function as chromatin insulators. | Raab JR et al. | β | 2012 | β |
| Increased expression of miR-325-3p by urocortin 2 and its involvement in stress-induced suppression of LH secretion in rat pituitary. | Nemoto T et al. | β | 2012 | β |
| MicroRNAs: a new ray of hope for diabetes mellitus. | Kumar M et al. | β | 2012 | β |
| Nuclear noncoding RNA surveillance: is the end in sight? | Wolin SL et al. | β | 2012 | β |
| PP4 dephosphorylates Maf1 to couple multiple stress conditions to RNA polymerase III repression. | Oler AJ et al. | β | 2012 | β |
| Protein interactions with piALU RNA indicates putative participation of retroRNA in the cell cycle, DNA repair and chromatin assembly. | Blackwell BJ et al. | β | 2012 | β |
| Retrotransposon profiling of RNA polymerase III initiation sites. | Qi X et al. | β | 2012 | β |
| RNA polymerase III subunit architecture and implications for open promoter complex formation. | Wu CC et al. | β | 2012 | β |
| RNA polymerase III transcription control elements: themes and variations. | Orioli A et al. | β | 2012 | β |
| Structural and functional aspects of winged-helix domains at the core of transcription initiation complexes. | Teichmann M et al. | β | 2012 | β |
| TFIIIC localizes budding yeast ETC sites to the nuclear periphery. | Hiraga S et al. | β | 2012 | β |
| The Murine PSE/TATA-dependent transcriptome: evidence of functional homologies with its human counterpart. | Bruzzone MJ et al. | β | 2012 | β |
| 17A, a novel non-coding RNA, regulates GABA B alternative splicing and signaling in response to inflammatory stimuli and in Alzheimer disease. | Massone S et al. | β | 2011 | β |
| A common sequence motif involved in selection of transcription start sites of Arabidopsis and budding yeast tRNA genes. | Yukawa Y et al. | β | 2011 | β |
| A comprehensive genomic binding map of gene and chromatin regulatory proteins in Saccharomyces. | Venters BJ et al. | β | 2011 | β |
| Acquisition of neuron-like electrophysiological properties in neuroblastoma cells by controlled expression of NDM29 ncRNA. | Gavazzo P et al. | β | 2011 | β |
| Additional box B of RNA polymerase III promoter in SINE B1 can be functional. | Koval AP et al. | β | 2011 | β |
| A global picture of tRNA genes in plant genomes. | Michaud M et al. | β | 2011 | β |
| Analyzing RNA polymerase III by electron cryomicroscopy. | FernΓ‘ndez-Tornero C et al. | β | 2011 | β |
| Crystal structure of the C17/25 subcomplex from Schizosaccharomyces pombe RNA polymerase III. | Ehara H et al. | β | 2011 | β |
| CTCF function is modulated by neighboring DNA binding factors. | Weth O et al. | β | 2011 | β |
| Genomic relationship between SINE retrotransposons, Pol III-Pol II transcription, and chromatin organization: the journey from junk to jewel. | Lunyak VV et al. | β | 2011 | β |
| Heat shock factor binding in Alu repeats expands its involvement in stress through an antisense mechanism. | Pandey R et al. | β | 2011 | β |
| Long noncoding RNA as a regulator for transcription. | Kurokawa R | β | 2011 | β |
| Mutations in POLR3A and POLR3B encoding RNA Polymerase III subunits cause an autosomal-recessive hypomyelinating leukoencephalopathy. | Saitsu H et al. | β | 2011 | β |
| Mutations of POLR3A encoding a catalytic subunit of RNA polymerase Pol III cause a recessive hypomyelinating leukodystrophy. | Bernard G et al. | β | 2011 | β |
| Phosphorylation of histone H3 serine 28 modulates RNA polymerase III-dependent transcription. | Zhang Q et al. | β | 2011 | β |
| Pol III binding in six mammals shows conservation among amino acid isotypes despite divergence among tRNA genes. | Kutter C et al. | β | 2011 | β |
| PROMoter uPstream Transcripts share characteristics with mRNAs and are produced upstream of all three major types of mammalian promoters. | Preker P et al. | β | 2011 | β |
| Recent insights into regulation of transcription by RNA polymerase III and the cellular functions of its transcripts. | Nikitina TV et al. | β | 2011 | β |
| RNA polymerase III drives alternative splicing of the potassium channel-interacting protein contributing to brain complexity and neurodegeneration. | Massone S et al. | β | 2011 | β |
| RNA polymerase III transcription in cancer: the BRF2 connection. | Cabarcas S et al. | β | 2011 | β |
| RNA splicing control: yet another gene regulatory role for long nuclear noncoding RNAs. | Zong X et al. | β | 2011 | β |
| Structure-function analysis of hRPC62 provides insights into RNA polymerase III transcription initiation. | LefΓ¨vre S et al. | β | 2011 | β |
| The central role of RNA in human development and cognition. | Mattick JS | β | 2011 | β |
| The functional role of long non-coding RNA in human carcinomas. | Gibb EA et al. | β | 2011 | β |
| The long arm of long noncoding RNAs: roles as sensors regulating gene transcriptional programs. | Wang X et al. | β | 2011 | β |
| The TFIIF-like Rpc37/53 dimer lies at the center of a protein network to connect TFIIIC, Bdp1, and the RNA polymerase III active center. | Wu CC et al. | β | 2011 | β |
| tRNA genes protect a reporter gene from epigenetic silencing in mouse cells. | Ebersole T et al. | β | 2011 | β |
| Widespread occurrence of non-canonical transcription termination by human RNA polymerase III. | Orioli A et al. | β | 2011 | β |
| Yeast H2A.Z, FACT complex and RSC regulate transcription of tRNA gene through differential dynamics of flanking nucleosomes. | Mahapatra S et al. | β | 2011 | β |
| 4.5SI RNA genes and the role of their 5'-flanking sequences in the gene transcription. | Gogolevskaya IK et al. | β | 2010 | β |
| A global view of genomic information--moving beyond the gene and the master regulator. | Mattick JS et al. | β | 2010 | β |
| An Alu-like RNA promotes cell differentiation and reduces malignancy of human neuroblastoma cells. | Castelnuovo M et al. | β | 2010 | β |
| Biochemical principles of small RNA pathways. | Liu Q et al. | β | 2010 | β |
| Cell growth- and differentiation-dependent regulation of RNA polymerase III transcription. | Dumay-Odelot H et al. | β | 2010 | β |
| Close association of RNA polymerase II and many transcription factors with Pol III genes. | Raha D et al. | β | 2010 | β |
| Conformational flexibility of RNA polymerase III during transcriptional elongation. | FernΓ‘ndez-Tornero C et al. | β | 2010 | β |
| Coordinated control of the gene expression machinery. | White RJ et al. | β | 2010 | β |
| Deep sequencing of human nuclear and cytoplasmic small RNAs reveals an unexpectedly complex subcellular distribution of miRNAs and tRNA 3' trailers. | Liao JY et al. | β | 2010 | β |
| Defining the RNA polymerase III transcriptome: Genome-wide localization of the RNA polymerase III transcription machinery in human cells. | Canella D et al. | β | 2010 | β |
| Functional characterization of the Drosophila MRP (mitochondrial RNA processing) RNA gene. | Schneider MD et al. | β | 2010 | β |
| General transcription factors and subunits of RNA polymerase III: Paralogs for promoter- and cell type-specific transcription in multicellular eukaryotes. | Teichmann M et al. | β | 2010 | β |
| Genomic binding profiles of functionally distinct RNA polymerase III transcription complexes in human cells. | Moqtaderi Z et al. | β | 2010 | β |
| Human RNA polymerase III transcriptomes and relationships to Pol II promoter chromatin and enhancer-binding factors. | Oler AJ et al. | β | 2010 | β |
| Identification and characterization of human snoRNA core promoters. | Li T et al. | β | 2010 | β |
| Integrative genomic analyses identify BRF2 as a novel lineage-specific oncogene in lung squamous cell carcinoma. | Lockwood WW et al. | β | 2010 | β |
| Non-coding RNAs and their epigenetic regulatory mechanisms. | Zhou H et al. | β | 2010 | β |
| Pol II and its associated epigenetic marks are present at Pol III-transcribed noncoding RNA genes. | Barski A et al. | β | 2010 | β |
| The C53/C37 subcomplex of RNA polymerase III lies near the active site and participates in promoter opening. | Kassavetis GA et al. | β | 2010 | β |
| The human Pol III transcriptome and gene information flow. | Noma K et al. | β | 2010 | β |
| The telomere-binding protein Tbf1 demarcates snoRNA gene promoters in Saccharomyces cerevisiae. | Preti M et al. | β | 2010 | β |
| Two isoforms of human RNA polymerase III with specific functions in cell growth and transformation. | Haurie V et al. | β | 2010 | β |
| 5'-flanking sequences can dramatically influence 4.5SH RNA gene transcription by RNA-polymerase III. | Koval AP et al. | β | 2009 | β |
| Alu-directed transcriptional regulation of some novel miRNAs. | Gu TJ et al. | β | 2009 | β |
| Eukaryotic snoRNAs: a paradigm for gene expression flexibility. | Dieci G et al. | β | 2009 | β |
| miRNA regulation of cytokine genes. | Asirvatham AJ et al. | β | 2009 | β |
| Multiple sequence-directed possibilities provide a pool of nucleosome position choices in different states of activity of a gene. | Vinayachandran V et al. | β | 2009 | β |
| Pervasive transcription of the eukaryotic genome: functional indices and conceptual implications. | Dinger ME et al. | β | 2009 | β |
| Positive modulation of RNA polymerase III transcription by ribosomal proteins. | Dieci G et al. | β | 2009 | β |
| Recombination at DNA replication fork barriers is not universal and is differentially regulated by Swi1. | Pryce DW et al. | β | 2009 | β |
| Regulation by c-Myc of ncRNA expression. | Kenneth NS et al. | β | 2009 | β |
| Structure-function analysis of RNA polymerases I and III. | Werner M et al. | β | 2009 | β |
| Targeting miR-205 in breast cancer. | Wu H et al. | β | 2009 | β |
| Transcription termination by nuclear RNA polymerases. | Richard P et al. | β | 2009 | β |
| Traumatic brain injury alters expression of hippocampal microRNAs: potential regulators of multiple pathophysiological processes. | Redell JB et al. | β | 2009 | β |
| Absolute gene occupancies by RNA polymerase III, TFIIIB, and TFIIIC in Saccharomyces cerevisiae. | Soragni E et al. | β | 2008 | β |
| Cell biology. RNA metabolism and oncogenesis. | Johnson DL et al. | β | 2008 | β |
| Conservation and implications of eukaryote transcriptional regulatory regions across multiple species. | Wan L et al. | β | 2008 | β |
| Dicistronic tRNA-5S rRNA genes in Yarrowia lipolytica: an alternative TFIIIA-independent way for expression of 5S rRNA genes. | Acker J et al. | β | 2008 | β |
| Function and assembly of a chromatin-associated RNase P that is required for efficient transcription by RNA polymerase I. | Reiner R et al. | β | 2008 | β |
| Mouse ES cells express endogenous shRNAs, siRNAs, and other Microprocessor-independent, Dicer-dependent small RNAs. | Babiarz JE et al. | β | 2008 | β |
| Noncoding RNA in development. | Amaral PP et al. | β | 2008 | β |
| Non-coding RNA production by RNA polymerase III is implicated in cancer. | Marshall L et al. | β | 2008 | β |
| Structured non-coding RNAs and the RNP Renaissance. | Hogg JR et al. | β | 2008 | β |
| Visual analysis of the yeast 5S rRNA gene transcriptome: regulation and role of La protein. | French SL et al. | β | 2008 | β |