ATAC-seq drug
Evidence from:
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Related entities (12)
| Subject | Relation | Object | p-value | Evidence |
|---|---|---|---|---|
| ATAC-seq | interacts_with | astrocytes | — | 1 |
| ATAC-seq | associated_with | brain bank | — | 1 |
| ATAC-seq | associated_with | CommonMind Consortium | — | 1 |
| ATAC-seq | interacts_with | D1 neurons | — | 1 |
| ATAC-seq | interacts_with | D2 neurons | — | 1 |
| ATAC-seq | expressed_in | dorsolateral prefrontal cortex | — | 1 |
| ATAC-seq | interacts_with | Illumina genotyping | — | 1 |
| ATAC-seq | associated_with | Illumina genotyping | — | 1 |
| ATAC-seq | interacts_with | oligodendrocytes | — | 1 |
| ATAC-seq | associated_with | trait | — | 1 |
| human samples | associated_with | ATAC-seq | — | 1 |
| qPCR | interacts_with | ATAC-seq | — | 1 |
Mentioned in (30)
Papers in which this entity is mentioned.
- Genome modelling and design across all domains of life with Evo 2. (2026)
- Advancing regulatory variant effect prediction with AlphaGenome. (2026)
- Enhancer activation from transposable elements in extrachromosomal DNA. (2025)
- Nanopore-based cell-free DNA fragmentation and methylation profiles from the cerebral spinal fluid of patients with lung cancer brain metastases. (2025)
- Biomni: A General-Purpose Biomedical AI Agent. (2025)
- Integrated single-cell multiomic profiling of caudate nucleus suggests key mechanisms in alcohol use disorder. (2025)
- Multi-omic quantitative trait loci link tandem repeat size variation to gene regulation in human brain. (2025)
- Three-dimensional genome landscape of primary human cancers. (2025)
- Integrated single-cell multiomic profiling of caudate nucleus suggests key mechanisms in alcohol use disorder. (2025)
- Transient loss of Polycomb components induces an epigenetic cancer fate. (2024)
- Integrated Single-Cell Multiomic Profiling of Caudate Nucleus Suggests Key Mechanisms in Alcohol Use Disorder. (2024)
- A DNA methylation atlas of normal human cell types. (2023)
- At the dawn: cell-free DNA fragmentomics and gene regulation. (2022)
- GATA4/5/6 family transcription factors are conserved determinants of cardiac versus pharyngeal mesoderm fate. (2022)
- Massively parallel reporter perturbation assays uncover temporal regulatory architecture during neural differentiation. (2022)
- Detecting cell-of-origin and cancer-specific methylation features of cell-free DNA from Nanopore sequencing. (2022)
- Discovery of regulatory noncoding variants in individual cancer genomes by using cis-X. (2020)
- Extrachromosomal DNA is associated with oncogene amplification and poor outcome across multiple cancers. (2020)
- CommonMind Consortium provides transcriptomic and epigenomic data for Schizophrenia and Bipolar Disorder. (2019)
- CUT&RUNTools: a flexible pipeline for CUT&RUN processing and footprint analysis. (2019)
- Single-cell multiomic analysis identifies regulatory programs in mixed-phenotype acute leukemia. (2019)
- Heritability enrichment of specifically expressed genes identifies disease-relevant tissues and cell types. (2018)
- Profiling Tumor Infiltrating Immune Cells with CIBERSORT. (2018)
- An improved ATAC-seq protocol reduces background and enables interrogation of frozen tissues. (2017)
- chromVAR: inferring transcription-factor-associated accessibility from single-cell epigenomic data. (2017)
- The PsychENCODE project. (2015)
- ATAC-seq: A Method for Assaying Chromatin Accessibility Genome-Wide. (2015)
- Epigenomics and the structure of the living genome. (2015)
- Reconstructing A/B compartments as revealed by Hi-C using long-range correlations in epigenetic data. (2015)
- EWS-FLI1 utilizes divergent chromatin remodeling mechanisms to directly activate or repress enhancer elements in Ewing sarcoma. (2014)
Merged raw entities (3)
All extracted name/type variants the normalize job merged into this entity. Use this to spot wrong merges, or aliases that should be split off.
| Raw name | Type | Papers | Mentions |
|---|---|---|---|
| atac-seq | drug | 30 | 53 |
| atac | drug | 1 | 1 |
| atac-seq ocr | drug | — | — |