GTEx cohort
Evidence from:
primary |
all sources
Related entities (7)
| Subject | Relation | Object | p-value | Evidence |
|---|---|---|---|---|
| GTEx | associated_with | brain | — | 2 |
| GTEx | associated_with | cerebellum | — | 1 |
| GTEx | associated_with | cortex | — | 1 |
| GTEx | associated_with | PAU | — | 1 |
| OPRM1 | expressed_in | GTEx | — | 1 |
| PAU | associated_with | GTEx | — | 1 |
| S-MultiXcan | interacts_with | GTEx | — | 1 |
Mentioned in (54)
Papers in which this entity is mentioned.
- Large language model agents for biological intelligence across genomics, proteomics, spatial biology, and biomedicine. (2026)
- Advancing regulatory variant effect prediction with AlphaGenome. (2026)
- Mapping the genetic landscape across 14 psychiatric disorders. (2026)
- Modeling heterogeneity in single-cell perturbation states enhances detection of response eQTLs. (2025)
- Tumour-wide RNA splicing aberrations generate actionable public neoantigens. (2025)
- Multi-omic quantitative trait loci link tandem repeat size variation to gene regulation in human brain. (2025)
- Efficient and accurate search in petabase-scale sequence repositories. (2025)
- Functional analysis of cancer-associated germline risk variants. (2025)
- Genome-wide analyses identify 30 loci associated with obsessive-compulsive disorder. (2025)
- Synchronized long-read genome, methylome, epigenome and transcriptome profiling resolve a Mendelian condition. (2025)
- Transcription start sites experience a high influx of heritable variants fueled by early development. (2025)
- Splicing neoantigen discovery with SNAF reveals shared targets for cancer immunotherapy. (2024)
- Global impact of unproductive splicing on human gene expression. (2024)
- Machine-guided design of cell-type-targeting cis-regulatory elements. (2024)
- Detection and analysis of complex structural variation in human genomes across populations and in brains of donors with psychiatric disorders. (2024)
- A DNA methylation atlas of normal human cell types. (2023)
- Multi-trait genome-wide association study of opioid addiction: OPRM1 and beyond. (2022)
- Single-cell analysis of somatic mutations in human bronchial epithelial cells in relation to aging and smoking. (2022)
- Variant interpretation using population databases: Lessons from gnomAD. (2022)
- Estimation of tumor cell total mRNA expression in 15 cancer types predicts disease progression. (2022)
- Global Biobank Meta-analysis Initiative: Powering genetic discovery across human disease. (2022)
- Inferring gene expression from cell-free DNA fragmentation profiles. (2022)
- Multivariate analysis of 1.5 million people identifies genetic associations with traits related to self-regulation and addiction. (2021)
- The mutational constraint spectrum quantified from variation in 141,456 humans. (2020)
- Effects of chronic intermittent ethanol exposure and withdrawal on neuroblastoma cell transcriptome. (2020)
- Genome-wide meta-analysis of problematic alcohol use in 435,563 individuals yields insights into biology and relationships with other traits. (2020)
- Transcriptomic signatures across human tissues identify functional rare genetic variation. (2020)
- Integrating predicted transcriptome from multiple tissues improves association detection. (2019)
- The mutational constraint spectrum quantified from variation in 141,456 humans (2019)
- Integrating predicted transcriptome from multiple tissues improves association detection. (2019)
- Genome-wide association study of alcohol consumption and use disorder in 274,424 individuals from multiple populations. (2019)
- Ethanol activates immune response in lymphoblastoid cells. (2019)
- The role and robustness of the Gini coefficient as an unbiased tool for the selection of Gini genes for normalising expression profiling data. (2019)
- RNA sequence analysis reveals macroscopic somatic clonal expansion across normal tissues. (2019)
- Single-cell multiomic analysis identifies regulatory programs in mixed-phenotype acute leukemia. (2019)
- Genome-wide association analysis links multiple psychiatric liability genes to oscillatory brain activity. (2018)
- Driver Fusions and Their Implications in the Development and Treatment of Human Cancers. (2018)
- Enter the Matrix: Factorization Uncovers Knowledge from Omics. (2018)
- Genome-wide association study identifies a novel locus for cannabis dependence. (2018)
- A compendium of conserved cleavage and polyadenylation events in mammalian genes. (2018)
- RNentropy: an entropy-based tool for the detection of significant variation of gene expression across multiple RNA-Seq experiments. (2018)
- Annotation-free quantification of RNA splicing using LeafCutter. (2018)
- Patterns and mechanisms of structural variations in human cancer. (2018)
- Nanopore Sequencing Reveals High-Resolution Structural Variation in the Cancer Genome (2017)
- Detect tissue heterogeneity in gene expression data with BioQC. (2017)
- The impact of structural variation on human gene expression. (2017)
- Toil enables reproducible, open source, big biomedical data analyses. (2017)
- 2D Representation of Transcriptomes by t-SNE Exposes Relatedness between Human Tissues. (2016)
- The PsychENCODE project. (2015)
- Tools and best practices for data processing in allelic expression analysis. (2015)
- A gene-based association method for mapping traits using reference transcriptome data. (2015)
- Profiling tissue-resident T cell repertoires by RNA sequencing. (2015)
- Systematic pan-cancer analysis of tumour purity. (2015)
- The Genotype-Tissue Expression (GTEx) project. (2013)
Merged raw entities (16)
All extracted name/type variants the normalize job merged into this entity. Use this to spot wrong merges, or aliases that should be split off.
| Raw name | Type | Papers | Mentions |
|---|---|---|---|
| gtex | cohort | 84 | 299 |
| gtex dataset | cohort | 4 | 4 |
| gtex portal | cohort | 3 | 6 |
| gtex tissues | cohort | 3 | 4 |
| genotype tissue expression | cohort | 1 | 1 |
| genotype-tissue expression project | cohort | 1 | 1 |
| gtex database | cohort | 1 | 1 |
| gtex study | cohort | 1 | 1 |
| genotype tissue expression portal | cohort | — | — |
| genotype‑tissue expression project | cohort | — | — |
| gtex data | cohort | — | — |
| gtex release v7 | cohort | — | — |
| gtex resource | cohort | — | — |
| gtex tissues (v8) | cohort | — | — |
| gtex version 8 | cohort | — | — |
| ldacc gtex portal | cohort | — | — |