hg19 drug
Evidence from:
primary |
all sources
Related entities (5)
| Subject | Relation | Object | p-value | Evidence |
|---|---|---|---|---|
| Bowtie | interacts_with | hg19 | — | 2 |
| hg19 | interacts_with | GRCh38 | — | 1 |
| hg19 | associated_with | GTEx donors | — | 1 |
| HRC | interacts_with | hg19 | — | 1 |
| MEGA | associated_with | hg19 | — | 1 |
Mentioned in (47)
Papers in which this entity is mentioned.
- Enhancer activation from transposable elements in extrachromosomal DNA. (2025)
- Stratified Medicine Pediatrics: Cell-Free DNA and Serial Tumor Sequencing Identifies Subtype-Specific Cancer Evolution and Epigenetic States. (2025)
- ChromoGen: Diffusion model predicts single-cell chromatin conformations. (2025)
- Efficient and accurate search in petabase-scale sequence repositories. (2025)
- Massively parallel reporter assay investigates shared genetic variants of eight psychiatric disorders. (2025)
- Multi-ancestry study of the genetics of problematic alcohol use in over 1 million individuals. (2023)
- Variant interpretation using population databases: Lessons from gnomAD. (2022)
- Inferring gene expression from cell-free DNA fragmentation profiles. (2022)
- Integrative reconstruction of cancer genome karyotypes using InfoGenomeR. (2021)
- Accurate detection of circulating tumor DNA using nanopore consensus sequencing. (2021)
- Multi-cancer analysis of clonality and the timing of systemic spread in paired primary tumors and metastases. (2020)
- GenMap: ultra-fast computation of genome mappability. (2020)
- Ewing sarcoma with FEV gene rearrangements is a rare subset with predilection for extraskeletal locations and aggressive behavior. (2020)
- Cancer PRSweb: An Online Repository with Polygenic Risk Scores for Major Cancer Traits and Their Evaluation in Two Independent Biobanks. (2020)
- Diverse noncoding mutations contribute to deregulation of cis-regulatory landscape in pediatric cancers. (2020)
- AmpliconReconstructor integrates NGS and optical mapping to resolve the complex structures of focal amplifications. (2020)
- CommonMind Consortium provides transcriptomic and epigenomic data for Schizophrenia and Bipolar Disorder. (2019)
- Rapid and reversible suppression of ALT by DAXX in osteosarcoma cells. (2019)
- A multi-task convolutional deep neural network for variant calling in single molecule sequencing. (2019)
- The ENCODE Blacklist: Identification of Problematic Regions of the Genome. (2019)
- Genome-wide cell-free DNA fragmentation in patients with cancer. (2019)
- Best practices for bioinformatic characterization of neoantigens for clinical utility. (2019)
- Complex rearrangements and oncogene amplifications revealed by long-read DNA and RNA sequencing of a breast cancer cell line. (2018)
- Comprehensive Cancer-Predisposition Gene Testing in an Adult Multiple Primary Tumor Series Shows a Broad Range of Deleterious Variants and Atypical Tumor Phenotypes. (2018)
- Tumor fraction in cell-free DNA as a biomarker in prostate cancer. (2018)
- The 3D Genome Browser: a web-based browser for visualizing 3D genome organization and long-range chromatin interactions. (2018)
- Accurate Recycling of Parental Histones Reproduces the Histone Modification Landscape during DNA Replication. (2018)
- Picky comprehensively detects high-resolution structural variants in nanopore long reads. (2018)
- Nanopore Sequencing Reveals High-Resolution Structural Variation in the Cancer Genome (2017)
- Statistical algorithms improve accuracy of gene fusion detection. (2017)
- Genetic effects on gene expression across human tissues. (2017)
- Scalable whole-exome sequencing of cell-free DNA reveals high concordance with metastatic tumors. (2017)
- Mapping and phasing of structural variation in patient genomes using nanopore sequencing. (2017)
- Dysregulation of Cortical Neuron DNA Methylation Profile in Autism Spectrum Disorder. (2017)
- Impact of cytosine methylation on DNA binding specificities of human transcription factors. (2017)
- Extrachromosomal oncogene amplification drives tumour evolution and genetic heterogeneity. (2017)
- Fast and Accurate Genomic Analyses using Genome Graphs (2017)
- Cell-free DNA Comprises an In Vivo Nucleosome Footprint that Informs Its Tissues-Of-Origin. (2016)
- DeconstructSigs: delineating mutational processes in single tumors distinguishes DNA repair deficiencies and patterns of carcinoma evolution. (2016)
- GABRA2 Alcohol Dependence Risk Allele is Associated with Reduced Expression of Chromosome 4p12 GABAA Subunit Genes in Human Neural Cultures. (2015)
- Experiences with workflows for automating data-intensive bioinformatics. (2015)
- The use of exome capture RNA-seq for highly degraded RNA with application to clinical cancer sequencing. (2015)
- An atlas of active enhancers across human cell types and tissues. (2014)
- Estimating telomere length from whole genome sequence data. (2014)
- Heritability and genomics of gene expression in peripheral blood. (2014)
- Characterizing and measuring bias in sequence data. (2013)
- DELLY: structural variant discovery by integrated paired-end and split-read analysis. (2012)
Merged raw entities (5)
All extracted name/type variants the normalize job merged into this entity. Use this to spot wrong merges, or aliases that should be split off.
| Raw name | Type | Papers | Mentions |
|---|---|---|---|
| hg19 | drug | 31 | 35 |
| grch37 | drug | 15 | 15 |
| human genome hg19 | drug | 1 | 1 |
| human reference genome hg19 | drug | — | — |
| reference human genome hg19 | drug | — | — |