paperKB
coga / coga-kb
Help
Sign in

Chunk #32 — Replication of eQTLs

Source
Genetic effects on gene expression across human tissues.
Embedded
yes

Text

with genes that are relevant in metabolic phenotypes, such as cholesterol levels. In the GTEx data, rs4731702 is in strong linkage disequilibrium with two variants, rs13234269 and rs35722851 (R2 =0.98 and 0.99, respectively), that are cis-eQTLs for KLF14 in subcutaneous adipose (P ≤2.2×10−5 and P ≤4.7×10−5, respectively). We evaluated the association of rs13234269 with all expressed genes in GTEx subcutaneous adipose (17,633 genes). Although we found no individually significant trans-eGenes, we found an enrichment of association with distal gene expression in subcutaneous adipose tissue (π1 =0.07, after PEER correction), replicating the results of the MuTHER study.