Chunk #42 — Discussion — URLs.

Source

Flexible statistical methods for estimating and testing effects in genomic studies with multiple conditions.

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yes

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Multivariate adaptive shrinkage (“mash”) software, https://github.com/stephenslab/mashr; code and data resources for GTEx analysis, https://github.com/stephenslab/gtexresults, https://doi.org/10.5281/zenodo.1296399; GTEx project, http://gtexportal.org; adaptive shrinkage (“ash”) software, https://github.com/stephens999/ashr; Sparse Factor Analysis (SFA) software, http://stephenslab.uchicago.edu/software.html; Extreme Deconvolution software, https://github.com/jobovy/extreme-deconvolution; METASOFT software, http://genetics.cs.ucla.edu/meta; Matrix eQTL software, http://www.bios.unc.edu/research/genomic_software/Matrix_eQTL.