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Chunk #6 — Results — Brain eGWAS

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Brain expression genome-wide association study (eGWAS) identifies human disease-associated variants.
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To assess the genetic component contributing to gene expression variability, we estimated intraclass correlation coefficients (ICC) [31] in the 15 samples measured in replicate on 5–6 different plates and 2–3 different days. Between-subject variance accounted for a median of 60% of total probe expression variance (Supplementary Table 4 in Dataset S1; Figure S4). The 746 probes for the top 2,980 cerebellar cisSNP associations had higher between-subject variance (median = 78%).