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Chunk #25 — Methods — Genome-wide expression and genotyping.

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Tissue-specific genetic control of splicing: implications for the study of complex traits.
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Affymetrix Human ST 1.0 exon arrays were used to assess exon and transcript expression levels for all samples used in the study. Genome-wide genotyping was performed using Illumina Human Hap550K chips. DNA and RNA were extracted using standard Qiagen protocols. Exon array sample preparation from total RNA was conducted based on standard Affymetrix protocols.