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Chunk #14 — Results — Inference of sample purity and ploidy in cancer-derived DNA

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Absolute quantification of somatic DNA alterations in human cancer.
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Here, sq represents the multiplicity of the point mutation, in integer values per cancer cell (which cannot exceed q(x)), and Ds = α q(x) + 2(1 - α). The values of F(x) correspond to the expected fraction of sequencing reads that support the mutation, which depend on the sample purity and absolute somatic copy-number at the mutant locus, q(x).