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Chunk #24 — Methods — Analysis Plan — Developmentally-Informative GWAS

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A Developmentally-Informative Genome-wide Association Study of Alcohol Use Frequency.
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GWAS model, which omits the path from SNP to the common factor, was used for this component of the analysis plan. Negative LDSC heritability estimates do not prevent polygenic risk scoring. The residual parameterization was used to construct polygenic scores that are specific to developmental periods. These two approaches to modeling are not directly comparable and the results for the discovery analysis and prediction by polygenic scores are considered separately.