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Chunk #8 — Materials and Methods — SNP-Heritability analyses

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Genome-Wide Association Study Meta-Analysis of the Alcohol Use Disorders Identification Test (AUDIT) in Two Population-Based Cohorts.
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The SNP-heritability of UKB AUDIT scores (total, AUDIT-C, AUDIT-P) was calculated using a genomic restricted maximum likelihood (GREML) method implemented in Genetic Complex Trait Analysis (GCTA)(19) on a subset of 117,072 unrelated individuals using a relatedness cut-off of 0.05 and controlling for age and sex. GREML analyses were run using genotyped SNPs with a MAF greater than 0.01 to construct the GRM.