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Chunk #45 — Materials and Methods — Regional profile of clustering coefficient

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Network analysis of intrinsic functional brain connectivity in Alzheimer's disease.
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Growth curve modeling, with an intercept (baseline), linear and quadratic terms, was used to compare the clustering coefficient values for threshold values from 0.1 to 0.6 in the two subject groups. We chose these thresholds because beyond 0.6 the network divides into disconnected subsets of nodes and small-world metrics are then no longer meaningful [20]. This analysis was performed using the Mplus software (http://www.statmodel.com). Growth curve models describe change (growth) with respect to a control variable. They are well-suited for analyzing group-level differences in biomedical data, particularly in cases where capturing and analyzing individual growth trajectories is important. In our study, the growth trajectories of clustering coefficient of a subject carry important information about the variance within the group and needs to be incorporated in the model. The coefficients of growth curve models capture the baseline performance, instantaneous growth rate, and the acceleration of the variable of interest–γ.