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Chunk #10 — Methods — Subjects and samples — Mayo Clinic Brain Bank

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Genetic variants associated with Alzheimer's disease confer different cerebral cortex cell-type population structure.
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RNA-seq based transcriptome data were generated from post-mortem brain tissue collected from cerebellum (CB; 189 samples) and temporal cortex (TC; 191 samples) of Caucasian subjects [18, 38]. RNA was extracted using Trizol® reagent and cleaned with Qiagen RNeasy. RIN measurement was performed with Agilent Technologies 2100 Bioanalyzer. Samples with RIN > 5 were included. Library was prepared by Mayo Clinic Medical Genome Facility Gene Expression and Sequencing Cores with TruSeq RNA Sample Prep Kit (Illumina).