Mayo Clinic Brain Bank RNA-seq was accessed from the Advanced Medicines Partnership – Alzheimer’s Disease (AMP-AD) portal (synapse ID = 5,550,404; accessed January 2017) (Table 1). Paired end reads of 2 × 101 base pairs were generated by Illumina HiSeq 2000 sequencers for an average of 134.9 million reads per sample. Neuropathology criteria, quality control procedures, RNA extraction, and sequencing details are explained elsewhere [18].
