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Chunk #16 — MATERIALS AND METHODS — Query for expression quantitative trait loci (eQTL)

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Genome-wide association study of alcohol use disorder identification test (AUDIT) scores in 20 328 research participants of European ancestry.
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We queried eQTL evidence for our top (P < 10−7) GWAS SNPs using public online resources. We used the Genotype-Tissue Expression Portal (GTEx) to identify eQTLs associated with the SNPs; and the RegulomeDB (Boyle et al. 2012) to identify regulatory DNA elements in non-coding and intergenic regions of the genome in normal cell lines and tissues.