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Chunk #13 — Methods — Association analyses

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Genome-wide and candidate gene association study of cigarette smoking behaviors.
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used unconditional logistic regression, adjusted for the same covariates. These tests were conducted separately for PLCO and NHS. For SNPs that passed QC filters and had minor allele frequency above 1% in both studies, we combined evidence for association across PLCO and NHS using weighted Z-scores [56]. Heterogeneity in SNP-smoking behavior associations across study was assessed using Q and I 2 statistics [57]. Power calculations were performed using Quanto (http://hydra.usc.edu/GxE/)[58]