Chunk #25 — Background — Details of data simulation — 2. Areas with LD/unique characteristics

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Construction of the model for the Genetic Analysis Workshop 14 simulated data: genotype-phenotype relationships, gene interaction, linkage, association, disequilibrium, and ascertainment effects for a complex phenotype.

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The locations and method used to generate the haplotypes, and disease-carrying haplotype frequencies are listed below (see also Table 2):