Chunk #26 — Background — Details of data simulation — 2. Areas with LD/unique characteristics

Source

Construction of the model for the Genetic Analysis Workshop 14 simulated data: genotype-phenotype relationships, gene interaction, linkage, association, disequilibrium, and ascertainment effects for a complex phenotype.

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1. Locus D1: SNP loci B01T0554-B01T0567. No LD. There are a total of 500 haplotypes, 30 of which carry a disease allele.