Hi-C data for 14 tissue types and seven cell lines were obtained from GSE8711211 (Supplementary Note 3). Predicted enhancer and promoter regions for 111 epigenomes were obtained from the Roadmap Epigenomics Projects10. Genomic coordinate of GWAS catalog1 reported SNPs was lifted down using liftOver software from hg38 to hg19. Normalized gene expression data (RPKM, Read Per Kilobase per Million) from GTEx portal v68 for 53 tissue types were processed for different purposes. The details are described in “GTEx Gene Expression Data Set” section. Curated pathways and gene sets from MsigDB v5.221 and WikiPathways22 which are assigned entrez ID.
