moderately strong relationship between mRNA transcript log2 FC and protein log2 AR (R-square = 0.334, p<0.0001; Figure 5B). When comparing shared GO enrichment across the networks of differentially expressed genes, proteins, and phosphorylated proteins described above, 26 BP, 3 MF, and 3 CC were identified as enriched in all three networks (Figure 5C–E). Although no Reactome or KEGG pathways were enriched in the network of differentially expressed genes, 4 Reactome and 2 KEGG Pathways were found to be enriched in the network of both differentially expressed proteins and phosphorylated proteins (Figure 5F,G). The identity of the enriched GO terms and pathways shared across datasets can be found in Supplementary Table 2.
