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Chunk #9 — Materials and Methods — Statistical Analysis

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Association of CHRN genes with "dizziness" to tobacco.
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As a secondary exploratory analysis, we tested whether any of the other CHRN SNPs for which genotyping had been completed might be associated with “dizziness.” A permutation procedure implemented as set-based tests in PLINK (Purcell et al., 2007) was used to obtain empirical p-values for the gene-based tests and experiment-wide p-values for all SNPs (10,000 permutations).