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Chunk #54 — EXPERIMENTAL PROCEDURES — Meta-analysis

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The neuronal transporter gene SLC6A15 confers risk to major depression.
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Meta-analyses were conducted using the R library rmeta applying a fixed effect model. In the first meta-analysis, three genetic models were tested, the two opposite carrier models and an allelic model resulting in a number of 2.02 effective tests as estimated from 10,000 permutations. In the second meta-analysis (combining the results of the first meta-analysis with the data from the RADIANT/WTCCC2 sample) only the recessive model for rs1545843 was tested. The adjustment for the two tests performed in RADIANT/WTCCC2 was done by adjusting the standard error of the estimate accordingly.