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Chunk #8 — Materials and Methods — Simple Sequence Repeat Genotyping

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Fine mapping of calcineurin (PPP3CA) gene reveals novel alternative splicing patterns, association of 5'UTR trinucleotide repeat with addiction vulnerability, and differential isoform expression in Alzheimer's disease.
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10 min, 45 cycles of 94°C for 0.5 min, 62°C for 0.5 min, 72°C for 0.75 min, followed by 72°C for 10 min. The PCR products were denatured with Hi-Di Formamide (Applied Biosystems, Foster City, CA) at 95° for 5 min. The fragments were electrophoresed using a DNA Sequencer (ABI 3100, Applied Biosystems) with a fluorescent ladder ROX350 (Applied Biosystems) as an internal size marker and analyzed with GENOTYPER software (Version 3.7).