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Chunk #13 — 1. Methods — 1.3. Genotyping, quality control and imputation

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Whole genome association scan for genetic polymorphisms influencing information processing speed.
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participants with X-chromosomal genotypes discrepant with the reported sex were removed (N = 8). After quality control procedures 1728 samples remained for the analyses. SNPs were included in the analyses if they met the following conditions: call rate ≥.95, minor allele frequency ≥.01, and HWE test with p ≥ 1 × 10−5.