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Chunk #46 — Results/Discussion — Single Locus Model

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Data and theory point to mainly additive genetic variance for complex traits.
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Many general points are illustrated by two simple examples, the single locus model with dominance and the two locus model with AA interaction, so we consider these in more detail. For the single locus model with genotypic values for CC, Cc and cc of +a, d and −a, respectively, V A = 2p(1−p)[a+d(1−2p)]2 and V D = 4p 2(1−p)2 d 2. For d = a, i.e. complete dominance of C, V A = 8p(1−p)3 a 2 and V D = 4p 2(1−p)2 a 2 and thus: at p = 0.5, V A = (2/3)V G; if the dominant allele is rare (i.e. p → 0), V G → 8p and V A/V G → 1, and if it is common, V G → 4p 2 and V A/V G → 0. Note, however, that V G and V A are much higher when the dominant allele is at low frequency, e.g. 0.1, than are V G and V D when the recessive is at low frequency, e.g. p = 0.9. Even for an overdominant locus (a = 0), all genetic