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Chunk #25 — Results and discussion — Over-represented motifs in alternative exons in the human brain, testis and liver

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Variation in alternative splicing across human tissues.
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A comparison of human testis-derived skipped exons to exons constitutively included in genes expressed in the testis identified only a single cluster of sequences, TE1, which share the tetramer UAGG. Enrichment of this motif, common to the brain-specific cluster BR7, suggests a role for regulation of exon skipping by hnRNP A1 - or a trans-acting factor with similar binding preferences - in the testis.