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Chunk #12 — Development of the protocol: Quality control of recovered clones

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Efficient, footprint-free human iPSC genome editing by consolidation of Cas9/CRISPR and piggyBac technologies.
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these sites was related to Cas9 activity. In addition, we detected clear off-target activity at a site (site A, Fig. 4b) with a 1 bp gRNA mismatch but a variant PAM sequence, CAG, with known partial activity19. Together these results suggest that Cas9 does not induce widespread genomic instability or rearrangements, but does induce off-target mutagenesis at rare sites that cannot be fully anticipated by current prediction rules.