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Chunk #16 — Results — Generation of the first million L1000 Connectivity Map profiles

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A Next Generation Connectivity Map: L1000 Platform and the First 1,000,000 Profiles.
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Second, we expanded in the dimension of genetic perturbation by knocking down and overexpressing 5,075 genes selected on the basis of their association with human disease or membership in biological pathways. Each genetic perturbation was profiled in triplicate, 96 hours after infection. For overexpression studies, a single cDNA clone was used, whereas three distinct shRNAs targeting each gene were profiled.