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Chunk #105 — STAR★Methods — Quantification and Statistical Analysis — Cytograph pipeline — Level 2 analysis

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Molecular Architecture of the Mouse Nervous System.
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We split cells by major class according to the class assignment probability. For each cluster at level 1, we removed cells with conflicting classification (i.e., cells classified as Neuron in a cluster where the majority of cells are classified as Vascular). We performed the same analysis steps as for Level 1.