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Chunk #61 — Methods — Bias adjustment

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Adjustment for index event bias in genome-wide association studies of subsequent events.
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yes

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It is reasonable to assume that \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\hat b$$\end{document}b^ is approximately independent of \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\hat \beta _{GX}$$\end{document}β^GX if a large number of independent SNPs enter the regression of Eq. (3). Therefore\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$var\left( {\hat \beta _{GY}^\prime } \right) + var\left( {\hat b\hat \beta _{GX}} \right) = \sigma _{GY}^2 + \hat b^2\sigma _{GX}^2 + \hat \beta _{GX}^2var\left( {\hat b} \right) + \sigma _{GX}^2var\left( {\hat b} \right)$$\end{document}varβ^GY′+varb^β^GX=σGY2+b^2σGX2+β^GX2varb^+σGX2varb^If \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\hat \beta _{GY}^\prime$$\end{document}β^GY′, \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\hat \beta _{GX}$$\end{document}β^GX and \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\hat b$$\end{document}b^ are maximum-likelihood estimates, we may assume that they are approximately normally distributed about their true values with variance estimates available. As the product of two normal variates, \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\hat b\hat \beta _{GX}$$\end{document}b^β^GX is not itself normal, but a bootstrap distribution for \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs}