Parameters were set as described in the above section and we used eQTLs in 44 tissue types from GTEx. For chromatin interaction mapping, Hi-C data of 14 tissue types (Adrenal, Aorta, Bladder, Dorsolateral Prefrontal Cortex, Hippocampus, Left Ventricle, Liver, Lung, Ovary, Pancreas, Psoas, Right Ventricle, Small Bowel and Spleen) from GSE87112 was used. Indels were excluded. rsID was mapped to dbSNP build 146 and chromosome and positions were extracted based on human genome hg19 reference. Only protein-coding genes were used in gene mapping and enrichment of DEG in 53 tissue types, Canonical Pathways and GO terms were tested.
