paperKB
coga / coga-kb
Help
Sign in

Chunk #33 — Materials and methods — Sample preparation — Calibration samples

Source
Detection of low prevalence somatic mutations in solid tumors with ultra-deep targeted sequencing.
Embedded
yes

Text

The four Coriell Institute DNA samples (NA12156, NA12878, NA18507, and NA19240) were quantified in triplicate using Nanodrop and each sample was diluted at a low concentration (approximately 5 ng/μl), which was re-measured in triplicate by Nanodrop (Agilent Technologies Santa Clara CA, USA). Based on these measurements, the four calibrations samples were prepared by mixing the appropriate volume of the initial sample (for the 74% and 20% prevalence) or of the diluted samples (for the 5% and 1% prevalence) for a total of 7.5 μg of DNA per calibration sample (Figure S2 in Additional file 1).