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Chunk #4 — RESULTS — Partitioning of genomic variation by chromosome

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Estimating the proportion of variation in susceptibility to schizophrenia captured by common SNPs.
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estimated variances compared to the 22 simultaneously estimated variances would provide evidence of stratification. The total variance explained was 26% for chromosomes fitted separately compared to a total of 23% when fitted together, demonstrating little evidence of population stratification (Figure 1a). The estimates of variance explained by each chromosome are linearly related with the length of the chromosome (correlation = 0.89, p = 2.6 × 10−8), consistent with a highly polygenic model and remarkably similar to results for human height12.