Chunk #16 — Methods — The QTLD test

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The quantitative trait linkage disequilibrium test: a more powerful alternative to the quantitative transmission disequilibrium test for use in the absence of population stratification.

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2) Measured Genotype (Model 3 vs. Model 1) – This standard fixed effects regression [6] on the marker genotypes is used to test whether or not there is a significant difference between the genotypic means assuming additivity of allelic effects.