A bivariate analysis of the TS and OCD samples using directly genotyped data yielded similar estimates for the heritability of TS (0.51, se = 0.10) and OCD (0.43, se = 0.08). The genetic correlation between the two disorders was 0.41 (se = 0.15), which was significantly different from zero (LRT = 7.98; p = 0.002). We conducted an exploratory bivariate analysis which limited the included SNPs to eQTLs identified in parietal cortex or cerebellum and found a genetic correlation of 0.31 (se = 0.17) which was also significantly different from zero (LRT = 3.62, p = 0.03). Our assessment of the impact of overlapping phenotypic co-morbidity on the estimate of genetic correlation resulted in a smaller, yet purer set of samples (after removing 316 samples with known TS/tic and OCD co-morbidity) and yielded a genetic correlation of 0.50 (se = 0.29; LRT = 4.08; p = 0.02).