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Chunk #8 — Materials and Methods — Data analysis

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Genome-wide significant association signals in IPO11-HTR1A region specific for alcohol and nicotine codependence.
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Before the association analysis, we strictly cleaned the phenotype and genotype data of all datasets (see the Supplemental Materials and Methods). We tested gene-disease associations in the European-American discovery cohort first, to identify the significant risk genomic regions at genome-wide significance level, and then we imputed and carefully examined this region across 21 cohorts.