As part of the Collaborative Study on the Genetics of Alcoholism (COGA), longitudinal EEG coherence data were collected on adolescent and young adult offspring ages 12–31 from families densely affected with AUD as well as community comparison families. In the current study, we examined whether polygenic risk for DSM-IV Alcohol Dependence, based on summary statistics from the meta-analysis conducted by the PGC [8], is reflected in individual differences in theta, alpha, and beta EEG coherence among adolescents and young adults throughout a key period of risk for the onset of AUD (ages 12–31). Furthermore, we examined how these associations differ between males and females to identify sex- and age-specific effects that may be otherwise masked in cross-sectional samples that combine across age and sex.