This new JASPAR release comes with a new computational tool to extract predicted JASPAR TFBSs intersecting with a user-provided input set of genomic regions. TFBSs can be further filtered by providing TF names, JASPAR matrix IDs and TFBS score thresholds. The software is available as a command-line tool at https://bitbucket.org/CBGR/jaspar_tfbs_extraction and in a Docker container at https://hub.docker.com/r/cbgr/jaspar_tfbs_extraction.
