Chunk #92 — STAR★Methods — Quantification and Statistical Analysis — Cytograph pipeline

Source

Molecular Architecture of the Mouse Nervous System.

Embedded

yes

Text

Cells with less than 600 detected molecules (UMIs), or less than 1.2-fold molecule to gene ratio, were marked invalid. Genes detected in fewer than 20 cells or more than 60% of all cells were marked invalid. These filters were applied separately to each input file.