Chunk #64 — Online Methods — Cell Type Annotation

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Integrated Single-Cell Multiomic Profiling of Caudate Nucleus Suggests Key Mechanisms in Alcohol Use Disorder.

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The 1,307,323 cells were divided into 49 clusters using the FindNeighbors and FindClusters functions in Seurat. Cell clusters were annotated into known striatal cell types based on expression levels of a combination of marker genes curated from established studies (Figure 2B).32,33,41,62,97