Chunk #96 — STAR★Methods — Quantification and Statistical Analysis — Cytograph pipeline — Preliminary exploratory analysis

Source

Molecular Architecture of the Mouse Nervous System.

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yes

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For clustering, we explored standard methods such as K-means (and iterative K-means) in PCA space, as well as graph-based algorithms (Louvain community detection) and density-based algorithms in 2D or 3D projections (e.g., DBSCAN, HDBSCAN).