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Chunk #2 — The genetic architecture of schizophrenia — SNPs

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Recent genetic findings in schizophrenia and their therapeutic relevance.
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Genome-wide association studies (GWAS) have yielded, as their sample size has grown, increasing and now unequivocal evidence for common SNPs contributing to schizophrenia risk. In a study and meta-analysis involving about 21,000 cases and 38,000 controls by the Psychiatric Genetics Consortium (PGC) (Ripke et al., 2013), 22 loci were identified which contain SNP(s) genome-wide significant for association to schizophrenia. These can be considered statistically robust and indicate that one or more genes at the locus, and one or more variant within the gene(s), contribute to schizophrenia risk (Table 1). These SNPs are but the tip of the iceberg, with estimates that over 8000 SNPs independently contribute to schizophrenia, and which together will explain over 50% of the genetic predisposition (Ripke et al., 2013). The findings confirm that schizophrenia is a highly polygenic disorder (Lee et al., 2012; Purcell et al., 2009). A new analysis from the PGC on a considerably enlarged sample (‘PGC2’, in total, almost 37,000 cases and 113,000 controls) has begun to reveal these additional genes, identifying over 100 loci (implicating about 600 genes) that are now genome-wide significant for schizophrenia (Schizophrenia Working Group of the Psychiatric Genomics Consortium, 2014).