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Chunk #57 — Methods — Bias adjustment

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Adjustment for index event bias in genome-wide association studies of subsequent events.
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yes

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b^ \ast \frac{{var(\hat \beta _{GX})}}{{var(\beta _{GX})}}$$\end{document}b^=b^*var(β^GX)var(βGX). In the numerator \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$var(\hat \beta _{GX})$$\end{document}var(β^GX) can be immediately estimated from the data, whereas estimation of \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$var(\beta _{GX})$$\end{document}var(βGX) in the denominator is a well-studied problem in random effects meta-analysis35. We find that the Hedges–Olkin estimator\documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\widehat {var}\left( {\beta _{GX}} \right) = var\left( {\hat \beta _{GX}} \right) - E(\sigma _{GX}^2)$$\end{document}var^βGX=varβ^GX-E(σGX2)where \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\sigma _{GX}^2$$\end{document}σGX2 is the (estimated) sampling variance of \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\hat \beta _{GX}$$\end{document}β^GX, usually leads to acceptable estimates \documentclass[12pt]{minimal} \usepackage{amsmath} \usepackage{wasysym} \usepackage{amsfonts} \usepackage{amssymb} \usepackage{amsbsy} \usepackage{mathrsfs} \usepackage{upgreek} \setlength{\oddsidemargin}{-69pt} \begin{document}$$\hat b$$\end{document}b^ and given its ease of computation, we used this approach in our simulations.